Liquid chromatographic determination of 6-thiopurine metabolites formed in vitro in electrochemical and enzymatic oxidative activation

A micellar liquid chromatographic method is described which was developed for the separation of the oxidation metabolites of 6-thiopurine formed in vitro by electrochemical and enzymatic activation. Electrochemical activation was carried out with an electrochemical cell on-line with the chromatograph. In the potential range 0.4–0.8 V vs. Pd, intermediate purine-6-sulfenic acid could be detected together with purine-6-sulfinic acid and 6-thiopurine disulfide. At potentials > 0.8 V, purine-6-sulfonic acid was detected and the oxidation of 6-thiopurine was completed. Intermediates and products formed in the horseradish peroxidase-catalyzed oxidation of 6-thiopurine were also studied. Enzymatic activation with horseradish peroxidase was similar to electrochemical oxidation at <0.8 V. Detection of sulfenic acid in the enzymatic oxidation supports earlier results which indicated that this metabolite may have biological significance. The results also provide some insight into the enzymatic oxidation pathway.     

漆树漆酶催化2,6-二甲基酚的氧化反应

在0.1mol/L磷酸盐缓冲液中,漆树漆酶催化2,6-二甲基酚(DMP)氧化生成3,3'5.5'-四甲基-4,4'-二苯醌(TMDQ).pH8.0,温度40～50℃时酶促氧化DMP较快.DMP浓度在1.66×10^-4～9.92×10^-4mol/L时为一级反应,速率常数为3.57×10^-5s^-1,共存的二茂铁(Fc-H)能大大促进酶促氧化DMP的速度.提出了该反应可能的反应机理。     

Enzymatic degradation of oxidized cellulose hydrogels

The cellulose-based hydrogel with abundant aldehyde groups was prepared by periodate oxidation of cellulose hydrogel prepared by dissolution-regeneration of cellulose by aqueous LiOH/urea solvent. Aldehyde groups could be introduced retaining the nanoporosity of the cellulose gel. The enzymatic degradation of three grades of oxidized cellulose hydrogel, with aldehyde contents of 3.3, 8.1 and 18.6 per 100 glucose unit, was carried out using solutions containing cellulase and β-glucosidase at 37 °C up to 48 h. The degradation of oxidized gels was remarkably slower than that of original cellulose gel, depending strongly on the degree of oxidation. The portion except for the amount of glucose released was greater than the degree of oxidation, but became closer to the latter with increase in the degree of oxidation. This behavior can be interpreted in terms of the enzymatic recognition of the chemically modified cellulose chains.     

生物酶HRP催化H~2O~2氧化间苯二胺反应的研究

应用电化学分析,高效液相色谱(HPLC),紫外-可见光谱(UV-vis),红外光谱(IR)和核磁共振(NMR)等技术对辣根过氧化物酶(HRP)催化H~2O~2氧化间苯二胺(MPD)的反应进行了研究。伏安法和高效液相色谱实验说明,在所选择的酶催化反应条件下,酶催化反应生成一种产物。用化学方法制得了HRP酶催化H~2O~2氧化MPD的产物纯品。经UV-vis,IR和^1HNMR谱鉴定,产物为2,7-二氨基吩嗪。写出了酶催化反应过程,同时对酶催化反应产物的电极还原过程也进行了研究。     

Enzymatic oxidation of lignin and compounds modeling it. I. Investigation of the peroxidase oxidation of lignin by the chemiluminescence method

In the enzymatic oxidation of lignin, superweak fluorescence is detected which confirms the radical mechanism of peroxidase-catalyzed oxidation. The rate constants of the recombination and disproportionation of the radicals have been calculated. Both the degradation and the partial polymerization of the initial substance have been established by the gel filtration of the lignin oxidation products.     

Enzymatic oxidation of cadmium and lead metals photodeposited on cadmium sulfide

Cadmium and lead metals deposited on CdS particles are shown to act as substrates--electron donors for enzymes, hydrogenase from Thiocapsa roseopersicina (HG), NAD-dependent hydrogenase from Alcaligenes eutrophus (NLH), and ferredoxin:NADP oxidoreductase (FNR) from Chlorella in the formation of hydrogen, NADH and NADPH, respectively. Adsorption of the enzyme on the surface of the metallized CdS particle is required for enzymatic oxidation of metal. The maximum rates for the formation of hydrogen and NADH catalyzed by hydrogenase and NAD-dependent hydrogenase with metals as electron donors are comparable with the rates obtained for these enzymes using soluble substrates. Kinetic analysis of the enzymatic oxidation of cadmium metal has revealed that the rate decreases mainly due to the formation of a solid product, which is supposed to be Cd(OH)2. The deceleration of lead oxidation catalyzed by hydrogenase proceeds at the expense of the inhibitory effect of the formed Pb2+. The enzymatic oxidation of electrochemically prepared cadmium metal is also shown. Based on these results, a new mechanism of action of the enzymes involved in anaerobic biocorrosion is proposed. By this mechanism, the enzyme accelerates the process of metal dissolution through a mediatorless catalysis of the reduction of the enzyme substrate.     

Partial oxidation and oxidative polymerization of metallothionein

One mechanism for regulation of metal binding to metallothionein (MT) involves the non-enzymatic or enzymatic oxidation of its thiols to disulfides. Formation and speciation of oxidized MT have not been investigated in detail despite the biological significance of this redox biochemistry. While metal ion-bound thiols in MT are rather resistant towards oxidation, free thiols are readily oxidized. MT can be partially oxidized to a state in which some of its thiols remain reduced and bound to metal ions. Analysis of the oxidation products with SDS-PAGE and a thiol-specific labeling technique, employing eosin-5-iodoacetamide, demonstrates higher-order aggregates of MT with intermolecular disulfide linkages. The polymerization follows either non-enzymatic or enzymatic oxidation, indicating that it is a general property of oxidized MT. Supramolecular assemblies of MT add new perspectives to the complex redox and metal equilibria of this protein.     

REGENERATION OF NAD+ AND NADP+ COFACTORS BY PHOTOSENSITIZED ELECTRON TRANSFER

Abstract The irradiation with visible light of photosensitizer dyes like methylene blue or N-methyl phenazonium methyl sulfate leads to the oxidation of reduced coenzymes such as pyridine nucleotides (NADH or NADPH). This photoredox reaction can be used to regenerate the oxidized form of these coenzymes in enzymatic reactions and total consumption of a substrate with catalytic amounts of enzyme, coenzyme and photosensitizer can be performed. The process has been studied on two common enzymatic reactions: ethanol oxidation by alcohol-NAD ⁺ -oxidoreductase and gluconate-6-phosphate oxidation by 6-phospho-D-gluconate-NADP⁺-2-oxidoreductase. In the first case, a turnover number of 1125 has been obtained for the photoregeneration of NAD ⁺ from NADH.     

Oxidative deamination of benzylamine by electrogenerated quinonoid systems as mimics of amine oxidoreductases cofactors

The reactions of a new type of quinonoid system with benzylamine have been investigated in methanol in order to mimic the reactions occurring in the course of the enzymatic oxidation of amines by quinone cofactors. Under strictly anaerobic conditions, unstable quinonoid species 1(ox)()-4(ox)() have been selectively electrogenerated using anodic-controlled potential electrolysis. Thus, we have demonstrated that 3,4-quinone 1(ox)() is incapable of deaminating benzylamine, while 3,4-iminoquinone species 3(ox)() and 4(ox)() act as efficient catalysts for the autorecycling oxidation of benzylamine: the reaction efficiency reached 64 turnovers. Additional mechanistic investigations reveal that the oxidation of benzylamine by our quinonoid model cofactors proceeds unambiguously via a transamination mechanism, as suggested for many enzymatic systems.     

Biochemical and biopharmaceutical properties of macromolecular conjugates of uricase with dextran and polyethylene glycol.

Uricase (UC) was conjugated with dextran and polyethylene glycol and their biochemical and biopharmaceutical properties were studied. UC-dextran conjugates (UC-D) synthesized by four methods, periodate oxidation, cyanogen bromide, carbodiimide and cyanuric chloride largely retained the UC enzymatic activity depending on the extent to which they modified amino groups. The periodate oxidation method seemed best because it gave a conjugate with high yield and satisfactory activity retention. The conjugate of UC with activated polyethylene glycol (UC-PEG2) was also obtained with high yield but the remaining activity was somewhat lower than those of dextran conjugates at the same modification extent. UC-D and UC-PEG2 showed sustained enzymatic activity in plasma after intravenous injection to rats. The advantage of chemical modification of proteins, especially with dextran, by the periodate oxidation method for preparation of a protein-delivery system was thus suggested.     

Elementary steps of enzymatic oxidation of nifedipine catalyzed by horseradish peroxidase

The elementary steps of the enzymatic oxidation of nifedipine (NF) catalyzed by horseradish peroxidase (HRP) have been described based on analysis of kinetic magnetic field effects (MFEs). It has been shown that the first step of the catalytic cycle is single electron transfer resulting in formation of NF*(+) radical cation and ferroperoxidase (Per(2+)). As a result, comparison with an earlier studied oxidation reaction of NADH catalyzed by HRP evidenced that the enzymatic oxidations of two substrates-native, NADH, and its synthetic analogue, NF-catalyzed by HRP in the absence of H(2)O(2) follow identical mechanisms.     

Rationalization and in vitro modeling of the chemical mechanisms of the enzymatic oxidation of phenolic compounds in planta: from flavonols and stilbenoids to lignins

Enzymatic oxidation of phenolic compounds is a widespread phenomenon in plants. It is responsible for the formation of many oligomers and polymers, which are generally described as the result of a combinatorial coupling of the different radicals formed through oxidation of the phenol group and delocalization of the radical. We focused our interest on several phenolic compounds that are present in plants and known to form, under enzymatic oxidation, oligomers with different type of linkages between monomers. To explain this diversity of inter-monomer linkages and their variation according to the experimental procedure used for the enzymatic oxidation, we report an alternative mechanistic pathway involving dismutation of the radicals, leading to the formation of carbocations which, thereafter, react with nucleophilic species present in the medium. This alternative pathway allows the understanding of peculiar linkages between monomeric units in the oligomer and offers new insights for understanding the formation of phenolic biopolymers in plants.     

Oxidation of polycyclic aromatic hydrocarbons catalyzed by soybean peroxidase

Soybean peroxidase (SBP) catalyzes the oxidation of a variety of polycyclic aromatic hydrocarbons (PAHs) in the presence of water-miscible organic cosolvents, including acetonitrile, tetrahydrofuran, and dimethylformamide (DMF). Oxidation was optimal at pH 2.0–2.5, with substantially lower reactivity at pH 1.5 as well as at pH > 3.0. Despite the low pH activity optimum, SBP had an observed half-life of 120 h at pH 2.5. Conversions of greater than 90% were observed with anthracene and 9-methylanthracene in the presence of 50% (v/v) DMF. Anthracene oxidation yielded exclusively anthraquinone, thereby demonstrating that SBP catalyzes a formal six-electron oxidation of the unactivated aromatic substrate to the quinone. A mechanism is proposed to account for this reaction that includes the initial one-electron oxidation of the PAH followed by addition of water to the oxidized PAH. 9-Methylanthracene was more reactive than anthracene, and its enzymatic oxidation yielded two products: anthraquinone and 9-methanol-9,10-dihydroanthracene. The former product indicates that loss of the methyl group occurs during enzymatic oxidation. These results suggest that SBP could be useful in the conversion of PAHs into more environmentally benign materials.     

Evaluation of wet oxidation pretreatment for enzymatic hydrolysis of softwood

The wet oxidation pretreatment (water, oxygen, elevated temperature, and pressure) of softwood (Picea abies) was investigated for enhancing enzymatic hydrolysis. The pretreatment was preliminarily optimized. Six different combinations of reaction time, temperature, and pH were applied, and the compositions of solid and liquid fractions were analyzed. The solid fraction after wet oxidation contained 58–64% cellulose, 2–16% hemicellulose, and 24–30% lignin. The pretreatment series gave information about the roles of lignin and hemicellulose in the enzymatic hydrolysis. The temperature of the pretreatment, the residual hemicellulose content of the substrate, and the type of the commercial cellulase preparation used were the most important factors affecting the enzymatic hydrolysis. The highest sugar yield in a 72-h hydrolysis, 79% of theoretical, was obtained using a pretreatment of 200°C for 10 min at neutral pH.     

Processing of cyclopropylarenes by toluene dioxygenase: isolation and absolute configuration of metabolites

Several arenes possessing a cyclopropyl substituent were subjected to enzymatic oxidation with toluene dioxygenase. The absolute configuration of metabolites was established by chemical means.     

Absolute stereochemistry and preferred conformations of urate degradation intermediates from computed and experimental circular dichroism spectra

The enzymatic oxidation of urate leads to the sequential formation of optically active intermediates with unknown stereochemistry: (-)-5-hydroxyisourate (HIU) and (-)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). In accordance with the observation that a defect in HIU hydrolase causes hepatocarcinoma in mouse, a detoxification role has been proposed for the enzymes accelerating the conversion of HIU and OHCU into optically active (+)-allantoin. The enzymatic products of urate oxidation are normally not present in humans, but are formed in patients treated with urate oxidase. We used time-dependent density functional theory (TDDFT) to compute the electronic circular dichroism (ECD) spectra of the chiral compounds of urate degradation (HIU, OHCU, allantoin) and we compared the results with experimentally measured ECD spectra. The calculated ECD spectra for (S)-HIU and (S)-OHCU reproduced well the experimental spectra obtained through the enzymatic degradation of urate. Less conclusive results were obtained with allantoin, although the computed optical rotations in the transparent region supported the original assignment of the (+)-S configuration. These absolute configuration assignments can facilitate the study of the enzymes involved in urate metabolism and help us to understand the mechanism leading to the toxicity of urate oxidation products.     

Enzymatic and electrochemical oxidation of uric acid: A mechanism for the peroxidase catalyzed oxidation of uric acid

The oxidation of uric acid has been studied by thin-layer spectroelectrochemistry using an optically transparent gold minigrid electrode and enzymatically using peroxidase. Under both enzymatic and electrochemical conditions a u.v.-absorbing intermediate (λ_max=302–304 nm between pH 7–9.3) is observed. This intermediate is proposed to be an imine-alcohol species formed by rapid hydration of the primary reaction product which is a diimine. Under the conditions employed in both the enzymatic electrochemical studies the imine-alcohol intermediate is hydrated in a first order reaction with an observed rate constant of 3.5×10^?3s^?1 between pH 7–9.3. This study establishes the similarity between the electrochemical and enzymatic oxidation of uric acid and indicates that electrochemical investigations of the redox behavior of purines can provide unique insights into their biological redox properties.     

Rational design of quinones for high power density biofuel cells

Enzymatic fuel cells (EFCs) are devices that can produce electrical energy by enzymatic oxidation of energy-dense fuels (such as glucose). When considering bioanode construction for EFCs, it is desirable to use a system with a low onset potential and high catalytic current density. While these two properties are typically mutually exclusive, merging these two properties will significantly enhance EFC performance. We present the rational design and preparation of an alternative naphthoquinone-based redox polymer hydrogel that is able to facilitate enzymatic glucose oxidation at low oxidation potentials while simultaneously producing high catalytic current densities. When coupled with an enzymatic biocathode, the resulting glucose/O₂ EFC possessed an open-circuit potential of 0.864 ± 0.006 V, with an associated maximum current density of 5.4 ± 0.5 mA cm^–2. Moreover, the EFC delivered its maximum power density (2.3 ± 0.2 mW cm^–2) at a high operational potential of 0.55 V.     

Selective Enzymatic Oxidation of Silanes to Silanols

Compared to the biological world's rich chemistry for functionalizing carbon, enzymatic transformations of the heavier homologue silicon are rare. We report that a wild‐type cytochrome P450 monooxygenase (P450_BM3 from Bacillus megaterium, CYP102A1) has promiscuous activity for oxidation of hydrosilanes to give silanols. Directed evolution was applied to enhance this non‐native activity and create a highly efficient catalyst for selective silane oxidation under mild conditions with oxygen as the terminal oxidant. The evolved enzyme leaves C?H bonds present in the silane substrates untouched, and this biotransformation does not lead to disiloxane formation, a common problem in silanol syntheses. Computational studies reveal that catalysis proceeds through hydrogen atom abstraction followed by radical rebound, as observed in the native C?H hydroxylation mechanism of the P450 enzyme. This enzymatic silane oxidation extends nature's impressive catalytic repertoire.     

Selective Enzymatic Oxidation of Silanes to Silanols

Compared to the biological world's rich chemistry for functionalizing carbon, enzymatic transformations of the heavier homologue silicon are rare. We report that a wild-type cytochrome P450 monooxygenase (P450_BM3 from Bacillus megaterium, CYP102A1) has promiscuous activity for oxidation of hydrosilanes to give silanols. Directed evolution was applied to enhance this non-native activity and create a highly efficient catalyst for selective silane oxidation under mild conditions with oxygen as the terminal oxidant. The evolved enzyme leaves C−H bonds present in the silane substrates untouched, and this biotransformation does not lead to disiloxane formation, a common problem in silanol syntheses. Computational studies reveal that catalysis proceeds through hydrogen atom abstraction followed by radical rebound, as observed in the native C−H hydroxylation mechanism of the P450 enzyme. This enzymatic silane oxidation extends nature's impressive catalytic repertoire.