Improved synthesis of oligonucleotides with an allylic backbone. Oligonucleotides containing acyclic, achiral nucleoside analogues: N-1 or N-9-[3-hydroxy-2-(hydroxymethyl)prop-1-enyl]nucleobases

An improved phosphoramidite method is described to prepare oligonucleotides modified with the acyclic, achiral monomers 1. Examination of dimers, prepared on solid support or in solution, showed that phosphortriester dimers containing the allylic unit 1 were unstable towards bases, whereas phosphordiester dimers were stable. Phosphordiester dimers were obtained by replacing cyanoethyl phosphoramidites 2 with phosphoramidites 3, which gave phosphordiesters directly upon oxidation. The phosphordiester dimers were found to be stable towards capping and oxidation, but were somewhat labile towards acids. By reducing the contact time to acids during detritylation it was possible to prepare oligonucleotides containing 4 or 8 modified A, G or T units. The modified oligonucleotides hybridized to complementary DNA and RNA, although with reduced affinity (DeltaT(m) per modification -1 to -5 degrees C).     

Synthesis of 9-(2,3-dihydroxy-1-propoxymethyl)guanine - a new potential antiviral agent

Coupling of tris(trimethylsilyl)guanine (4) with 1,2-di-$\text{O}$-acetyl-3-$\text{O}$chloromethyl glycerol (3), followed by removal of the protecting groups afforded 9-(2,3-dihydroxy-1-propoxy)guanine (1). Compound 1 exhibited potent antiviral activity.     

Regiochemical Trends in Intramolecular [2 + 2] Photocycloadditions of 6-(prop-2-enyl)cyclohex-2-enones and 5-(prop-2-enyl)cyclopent-2-enones

The effect of substituents (X ? H, Me, or F at C(6), R ? H or Me at C(2′) of the allyl side chain) on the photoisomerization (λ = 350 nm) of 6-allylcyclohex-2-enones 1 in MeCN is studied. Substituents X control the overall efficiency of intramolecular [2 + 2] photocycloadduct formation (Φ: Me > F > H) but do not exercise an influence on the orientation of addition of the exocyclic double bond to the enone C?C bond. In contrast, replacement of the prop-2-enyl (R ? H) by a 2-methylprop-2-enyl (R ? Me) side chain causes a change in the tricyclo[3.3.1.0^2,7]nonan-6-one 4 vs. tricyclo[4.2,1.0^3,8]nonan-7-one ( 5 ) product ratio from 100:0 (R ? H) to roughly 2:1 (R ? Me) but has almost no bearing on the relative rates of conversion of 1 to products. For C(6)-unsubstituted enones 1aa and 1ba (X ? H), the efficiency of cyclization becomes low enough so that lumiketone rearrangement to bicyclohexanones 6 and 3-isopropylcyclopent-2-enones 9 becomes competitive. Enones 9 undergo consecutive intramolecular [2 + 2] photocycloaddition to tricyclo[3.2.1.0^3,6]octan-2-ones 7 and to tricyclo[3.2.1.0^3,6]octan-7-ones 8 , compounds 8 only being formed when R ? Me.     

[Z]-2-(芳基锡基)-1-(9-芴醇)乙烯的合成、结构与性质

用三苯基氢化锡,三对甲苯基氢化锡作为锡氢化试剂与9-乙炔基-9-芴醇进行反应,合成了2个有机锡化合物:[Z]-2-(三苯基锡基)-1-(9-芴醇)乙烯(1)和[Z]-2-(三对甲苯基锡基)-1-(9-芴醇)乙烯(2)。化合物1和2分别与ICl,Br~2,I~2反应,得到6个有机锡一卤化物,6个有机锡二卤化物和2个有机锡混合卤化物(3-16)。有机锡一碘化物7,13和有机锡二碘化物8,14与KOH乙醇溶液反应,分别得到相应的有机锡氢氧化物17,18和有机锡氧化物19,20。有机锡二碘化物8,14分别与含氮双齿配体1,10-邻菲罗啉(Phen),2,2'-联吡啶(Bipy),8-羟基喹啉(Oxin)反应,得到6个相应的配合物21-26。26个新化合物通过元素分析,锡含量测定,IR,^1HNMR测定对其结构进行了表征。同时测定了化合物2的晶体结构,晶体属单斜晶系,空间群P2~1/c。化合物2是以Sn原子为中心扭曲的四面体构型。     

Efficient synthesis of achiral seco-cyclopropylbenz[2,3-e]indoline analogues: [4-amino-2-(5,6,7-trimethoxyindole-2-carboxamido)naphthalen-1-yl]ethyl chloride and [4-hydroxy-2-(5,6,7-trimethoxyindole-2-carboxamido)naphthalen-1-yl]ethyl chloride

Achiral seco-aminocyclopropylbenz[2,3-e]indoline and seco-hydroxycyclopropylbenz[2,3-e]indoline (seco-CBI) analogues of the duocarmycins and CC-1065, e.g., 7 and 8, are potent anticancer agents. This paper describes significantly improved synthetic strategies for preparing these compounds. Starting from Martius acid (9), the new strategy gave a 13-fold increase in the overall yield of 7, and the use of di-tert-butyl malonate was economically beneficial. For compound 8, the new strategy employed an Emmons-Horner reaction, followed by a Stobbe condensation, and the overall yield was improved 15-fold.     

Cyclization reactions of 1-[3'-hydroxy-2'-(hydroxymethyl)prop-1'-enyl]pyrimidine nucleobases: intramolecular Michael additions to the C(5)=C(6) bonds and intramolecular dehydrations

The tendency of a series of acyclic nucleoside analogues 1a-f to undergo intramolecular cyclization reactions was investigated. All compounds, when treated with NaOD, were in equilibrium with the bicyclic compounds 2a-f, arising from Michael addition of a hydroxy group to the C(5)=C(6) bonds. Derivatives of 2,4-pyrimidinediones (1a,b) had the highest tendency to undergo intramolecular Michael addition when treated with triethylamine, whereas the cyclization of 4-amino-2-pyridones (1c-f) proceeded best with acid. The exocyclic double bond of was essential for the cyclization to occur. Commonly used N-protecting groups as the benzoyl- and the dibutylaminomethylene group enhanced cyclization. Under acidic anhydrous conditions 1b and 1e cyclized to the 2,4'-anhydro compounds 1b and 1e.     

Solution properties of poly[1-(9-carbazyl)-2,3-(diethoxycarbonyl)-butane-1,4-diyl]

Poly[1-(9-carbazyl)-2,3-(diethoxycarbonyl)-butane-1,4-diyl] (I), obtained by radical copolymerization of 9-vinylcarbazole with diethylfumarate, has been characterized by viscometry and light scattering. The Huggins constant in benzene at 25 is k_H = 0.33. The Mark-Houwink relationship suggests that benzene is a good solvent for the alternating copolymer I (a = 0.67; K = 1.46·10^?2 ml/g). The unperturbed dimension of the chain is given by value (R₀²/M)^0.5 = 5.73·10^?9 cm·mol^0.5 g^?0.5. The steric factor σ = 2.51 indicates a higher flexibility for this polymer than for poly[1-(9-carbazyl)ethylene].     

Synthesis of [3-(trimethylsilyl)prop-2-yn-1-yl] selenides

Efficient and selective methods have been developed for the synthesis of previously unknown organyl [3-(trimethylsilyl)prop-2-yn-1-yl] selenides, organyl prop-2-yn-1-yl selenides, and bis[3-(trimethylsilyl) prop-2-yn-1-yl] selenide by reactions of 3-bromo-1-(trimethylsilyl)prop-1-yne with the corresponding organylselenolates and sodium selenide generated from diorganyl diselenides or elemental selenium by the action of sodium tetrahydridoborate.     

The preparation and reactions of 1,3,4,5,6,7,8-heptafluoro-2-naphthyl prop-2-enyl ether: Formation of 1,3,4,5,6,7,8-heptafluoro-1-(prop-2-enyl)naphthalen-2-one and the photolysis and pyrolysis of this ketone [1].

1,3,4,5,6,7,8-Heptafluoro-2-naphthyl prop-2-enyl ether (8) was isomerised in boiling xylene to 1,3,4,5,6,7,8-heptafluoro- 1-(prop-2-enyl)naphthalen-2-one (9). Photolysis of (9) gave 2,5,7-trifluoro-3,4-(tetrafluorobenzo)tricyclo[3.3.1.O^2,7]non-3- en-6-one (11) (by a [2 + 2] addition) and 1,2,7-trifluoro-3,4- (tetrafluorobenzo) tricyclo [3.3.1.O^2,7]non-3-en-8-one (12) (via an initial [3,5] photochemically-allowed sigmatropic shift). Pyrolysis of (9) at 455° also gave (11), while at 490°, both (9) and (11) gave 1-fluorovinyl 4,5,6,7,8-pentafluoro-1-naphthyl ketone (19).     

Synthesis of 9-[(2-hydroxy-1-phosphonylethoxy)ethyl]guanine, 1-[(2-hydroxy-1-phosphonylethoxy)ethyl]cytosine and 9-[(2-hydroxy-1-phosphonylethoxy)ethyl] adenine

The acyclic nucleoside phosphonate analogues, 9-[(2-hydroxy-1-phosphonylethoxy)ethyl]guanine 6 , 1-[(2-hydroxy-1-phosphonylethoxy)ethyl]cytosine 7 and 9-[(2-hydroxy-1-phosphonylethoxy)ethyl]adenine 8 , have been prepared by the coupling of a tosylate of the phosphonate side chain 12 with a purine or pyrimidine base followed by deprotection of the blocking groups.