Thermochemical determination of structure of negative ions on the basis of data from resonance electron capture mass spectrometry. 1. Heterocyclic analogs of cyclopentadiene

Appearance energies have been measured for negative ions formed in the gas phase upon dissociative capture of electrons by molecules of cyclopentadiene, pyrrole, selenophene, thiophene, furan, and furan derivatives. From an analysis of the enthalpies of formation of the fragmentation products, it has been established that electron capture by molecules of C₄H₄X (X=O, S, Se, NH, CH₂) leads to the formation of ions with cyclic and acyclic structures.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 3, pp. 590–592, March, 1991.     

Thermochemical determination of the structure of negative ions with the data from resonance electron capture spectrometry. 2. 5-Substituted 2-furancarboxylic acids and their esters

The energetics of isomerization and fragmentation of carboxylic acids and their esters from the furan series were investigated in conditions of resonance electron capture with the formation of negative ions. The enthalpies of formation of fragmentary negative ions were determined and the structure of some charged and neutral products of dissociation of these compounds was established. Schemes of the hydrogen and backbone rearrangements were proposed.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 9, pp. 2049–2054, September, 1991.     

New quantification procedure for the analysis of chlorinated paraffins using electron capture negative ionization mass spectrometry

An improved quantification procedure for the analysis of chlorinated paraffins (CPs) is presented based on electron capture negative ionization mass spectrometry. It compensates differences in response factors between reference CP mixtures and the CP pattern present in environmental samples. The use of a CP standard with a matching degree of chlorination is no longer necessary. It could be shown that the response factors of C10-, C11-, C12- and C13-CP mixtures of both 50 and 60% chlorine content were only slightly influenced by the carbon chain length. A linear correlation (R2 = 0.965) between the total response factor of a CP mixture and its chlorine content was obtained for seven short chain chlorinated paraffin mixtures (SCCP, C10-C13) with different composition and chlorine content (51-69%). Maximum single deviations were <7% for this reference set. It allowed to determine the correct total response factor of the CP composition present in a sample. The deviations were not more than 7-33% for five independent SCCP control samples compared to up to 373% for the conventional procedure. The procedure was tested by quantifying the SCCP and MCCP levels in 10 fish liver samples. The proposed method allowed to compensate the influence of the degree of chlorination of the applied reference standard on the total response factor.     

Limitations of low resolution mass spectrometry in the electron capture negative ionization mode for the analysis of short- and medium-chain chlorinated paraffins

The analysis of complex mixtures of chlorinated paraffins (CPs) with short (SCCPs, C₁₀–C₁₃) and medium (MCCPs, C₁₄–C₁₇) chain lengths can be disturbed by mass overlap, if low resolution mass spectrometry (LRMS) in the electron capture negative ionization mode is employed. This is caused by CP congeners with the same nominal mass, but with five carbon atoms more and two chlorine atoms less; for example C₁₁H₁₇³⁷Cl³⁵Cl₆ (m/z 395.9) and C₁₆H₂₉³⁵Cl₅ (m/z 396.1). This can lead to an overestimation of congener group quantity and/or of total CP concentration. The magnitude of this interference was studied by evaluating the change after mixing a SCCP standard and a MCCP standard 1+1 (S+MCCP mixture) and comparing it to the single standards. A quantification of the less abundant C₁₆ and C₁₇ congeners present in the MCCP standard was not possible due to interference from the major C₁₁ and C₁₂ congeners in the SCCPs. Also, signals for SCCPs (C₁₀–C₁₂) with nine and ten chlorine atoms were mimicked by MCCPs (C₁₅–C₁₇) with seven and eight chlorine atoms (for instance C₁₀H₁₂Cl₁₀ by C₁₅H₂₄Cl₈). A similar observation was made for signals from C₁₅–C₁₇ CPs with four and five chlorine atoms resulting from SCCPs (C₁₀–C₁₂) with six and seven chlorine atoms (such as C₁₅H₂₈Cl₄ by C₁₀H₁₆Cl₆) in the S+MCCP mixture. It could be shown that the quantification of the most abundant congeners (C₁₁–C₁₄) is not affected by any interference. The determination of C₁₀ and C₁₅ congeners is partly disturbed, but this can be detected by investigating isotope ratios, retention time ranges and the shapes of the CP signals. Also, lower chlorinated compounds forming [M+Cl]^– as the most abundant ion instead of [M-Cl]^– are especially sensitive to systematic errors caused by superposition of ions of different composition and the same nominal mass.     

Further studies on a site-specific hydrogen transfer observed in electron capture negative ion chemical ionization mass spectrometry of hydroxyamine pentafluoropropionate derivatives

Further studies have demonstrated that the site-specific hydrogen transfer process involved in the formation of the m/z 145 anion of β-hydroxyamine pentafluoropropionate (PFP) derivatives observed under electron capture negative ion chemical ionization conditions occurs when the two functional groups are separated by up to five carbon atoms. Deuterium labelling has established that the site specificity, transfer of a hydrogen atom from the carbon adjacent to nitrogen to the OPFP group, is maintained in 4-amino-butan-1-ol-N, O-(PFP)₂. The corresponding PFP derivatives of the N-methylaminoalkanol-(PFP)₂ derivatives lack the m/z 145 species with m/z 163, [OPFP]^? being the base anion. Substitution of alkyl groups on the carbon adjacent to oxygen results in a diminution of the ion intensity at m/z 145. with a marked increase in the intensity of m/z 144. The formation of the m/z 145 and 144 anions to proposed to proceed through the intervention of a fluoride ion-molecule complex as outlined in Scheme 1 with the product ion distribution dependent on which of the two pathways is preferred.     

Feasibility of electron impact and electron capture negative ionisation mass spectrometry for the trace determination of tri- to deca-brominated diphenyl ethers in human samples

The applicability of two different MS ionisation modes (EI and ECNI) for the determination of PBDEs at low-trace levels in small-size (up to 1 mL) human samples was compared. The instrumental precision, expressed as R.S.D., obtained for both ionisation modes was similar and lower than 6% (repeatability) and 12% (intermediate precision) for all congeners investigated, except PBDE 209. The LODs obtained when using the ECNI-MS operation mode (6-507 fg) were lower than those found in EI-MS experiments (9 and 10,909 fg), mainly for those congeners with a high bromination degree, i.e., hepta- to deca-BDEs. The selectivity of the ECNI-MS method proposed in the present work was improved by using two ions of the [M−H_xBr_y]⁻ cluster as both qualifier and quantifier ions. For the final validation of the methods, serum and breast milk samples from two different inter-laboratory exercises were analysed. A good agreement was found between the results obtained using the proposed methods and the results provided by the different inter-laboratory organisations, but only ECNI-MS provided the low-LODs necessary for the quantification of high brominated congeners (mainly, PBDEs 196, 197 and 209) at low concentration levels in small-size human samples. Finally, the ECNI-MS method was applied to real-life samples obtained from the Spanish population and the preliminary results obtained were in the same range as those found in other European and Asian regions and lower than the concentrations reported in USA populations.     

Kinetic intermediates in the folding of gaseous protein ions characterized by electron capture dissociation mass spectrometry

Alternative mechanisms propose that protein folding in solution proceeds either through specific obligate intermediates or by a multiplicity of routes in a "folding funnel". These questions are examined in the gas phase by using a new method that provides details of the noncovalent binding of solvent-free protein ions. Capture of an electron by a multiply charged cation causes immediate dissociation (ECD) of a backbone bond, but with negligible excitation of noncovalent bonds; thus ECD of a linear protein ion produces two measurable fragment ions only if these are not held together by noncovalent bonds. Thermal unfolding of 9+ ions of cytochrome c proceeds through the separate unfolding of up to 13 backbone regions (represented by 44 bond cleavages) with melting temperatures of <26 to 140 degrees C. An 0.25 s laser IR pulse induces unfolding of 9+ ions in <4 s in six of these regions, followed by their refolding in 2 min. However, for the 15+ ions a laser IR pulse causes slower unfolding through poorly defined intermediates that leads to far more ECD products (63% increase in bond cleavages) after 1 min, even more than heating to 140 degrees C, with refolding to a more compact conformation in 10 min. Random isomerization appears to produce a dynamic mixture of conformers that folds through a variety of pathways to the most stable conformer(s), consistent with a "folding funnel"; this might also be considered as an extension of the classical view to a system with a far smaller free energy change yielding multiple conformers. As cautions to inferring solution conformational structure from gas-phase data, no structural relationship between these gaseous folding intermediates and those in solution is apparent, consistent with reduced hydrophobic bonding and increased electrostatic repulsion. Further, equilibrium folding of gaseous ions can require minutes, and even momentary unfolding of an intermolecular complex during this time can be irreversible.     

Evaluation and optimization of electron capture dissociation efficiency in fourier transform ion cyclotron resonance mass spectrometry

Electron capture dissociation (ECD) efficiency has typically been lower than for other dissociation techniques. Here we characterize experimental factors that limit ECD and seek to improve its efficiency. Efficiency of precursor to product ion conversion was measured for a range of peptide (∼15% efficiency) and protein (∼33% efficiency) ions of differing sizes and charge states. Conversion of precursor ions to products depends on electron irradiation period and maximizes at ∼5–30 ms. The optimal irradiation period scales inversely with charge state. We demonstrate that reflection of electrons through the ICR cell is more efficient and robust than a single pass, because electrons can cool to the optimal energy for capture, which allows for a wide range of initial electron energy. Further, efficient ECD with reflected electrons requires only a short (∼500 μs) irradiation period followed by an appropriate delay for cooling and interaction. Reflection of the electron beam results in electrons trapped in or near the ICR cell and thus requires a brief (∼50 μs) purge for successful mass spectral acquisition. Further electron irradiation of refractory precursor ions did not result in further dissociation. Possibly the ion cloud and electron beam are misaligned radially, or the electron beam diameter may be smaller than that of the ion cloud such that remaining precursor ions do not overlap with the electron beam. Several ion manipulation techniques and use of a large, movable dispenser cathode reduce the possibility that misalignment of the ion and electron beams limits ECD efficiency.     

Combined infrared multiphoton dissociation and electron capture dissociation with a hollow electron beam in Fourier transform ion cyclotron resonance mass spectrometry

An electron injection system based on an indirectly heated ring-shaped dispenser cathode has been developed and installed in a 7 Tesla Fourier transform ion cyclotron resonance (FTICR) mass spectrometer. This new hardware design allows high-rate electron capture dissociation (ECD) to be carried out by a hollow electron beam coaxial with the ion cyclotron resonance (ICR) trap. Infrared multiphoton dissociation (IRMPD) can also be performed with an on-axis IR-laser beam passing through a hole at the centre of the dispenser cathode. Electron and photon irradiation times of the order of 100 ms are required for efficient ECD and IRMPD, respectively. As ECD and IRMPD generate fragments of different types (mostly c, z and b, y, respectively), complementary structural information that improves the characterization of peptides and proteins by FTICR mass spectrometry can be obtained. The developed technique enables the consecutive or simultaneous use of the ECD and IRMPD methods within a single FTICR experimental sequence and on the same ensemble of trapped ions in multistage tandem (MS/MS/MS or MS(n)) mass spectrometry. Flexible changing between ECD and IRMPD should present advantages for the analysis of protein digests separated by liquid chromatography prior to FTICRMS. Furthermore, ion activation by either electron or laser irradiation prior to, as well as after, dissociation by IRMPD or ECD increases the efficiency of ion fragmentation, including the w-type fragment ion formation, and improves sequencing of peptides with multiple disulfide bridges. The developed instrumental configuration is essential for combined ECD and IRMPD on FTICR mass spectrometers with limited access into the ICR trap.     

Estimating electron affinity from the lifetime of negative molecular ions: Cycloheptatriene derivatives

Russian Journal of Physical Chemistry A - Cycloheptatriene derivatives are studied by means of resonance electron capture negative ion mass spectrometry (REC NIMS). The average lifetimes of...     

Quantification of fg-pg amounts by electron capture negative ion mass spectrometry — Parameter optimisation and practical advices

Electron capture negative ion mass spectrometry (ECNI-MS) is a very suitable and popular technique for the identification and quantification of fg-pg amounts of compounds with a sufficiently high electron affinity. Many users of the ECNI mode have faced a lot of frustrating problems due to instrument contamination and wrong recommendations concerning instrument optimisation. This article summarises 14 years of experience with ECNI-MS using a large number of different instruments. Recommendations are given concerning optimisation procedures of important parameters such as ion source pressure and temperature as well as electron energy. An ion pressure optimisation method is proposed using a gas chromatograph. ECNI-MS is very sensitive against trace amounts of contaminants in the mass spectrometer and requires very clean components in the reagent gas line. Recommendations are given concerning suitable parts. Different other contamination sources are also discussed. The construction of a simple and clean gas inlet system is presented. Furthermore, contamination-free cleaning methods for the ion source are suggested. A test method based on the detection of hexachlorobenzene in the full scan mode (m/z 34–300) is proposed. It allows to evaluate both the background level in the mass spectrometer and the overall system performance. Clean instruments should show a signal-to-noise ratio of the total ion current GC signal of at least 20:1 without applying any mass signal area reject threshold. A linearity test procedure is also suggested. It shows that the linear range of a clean and optimised instrument is at least 3 orders of magnitude in the ECNI mode.     

Broad-spectrum determination of pesticides in groundwater by gas chromatography with electron capture detection, nitrogen-phosphorus detection, and tandem mass spectrometry.

Gas chromatography with electron capture detector (ECD), nitrogen-phosphorus detector (NPD), and tandem mass spectrometry (MS/MS) was used to identify 36 pesticides, widely used to control various pest and diseases in vegetables, in water after a preconcentration step on C18 cartridges. The recoveries obtained ranged from 70 to 135% at a fortification level of 100 ng/L with relative standard deviations of <36.2%. The limits of detection and quantitation were < or =48 and < or =160 ng/L, respectively. Important advantages of MS/MS over ECD and NPD in the determination of pesticides are also presented. The proposed analytical methodology was applied to the determination of pesticides in groundwater samples from an agricultural area, the Campo de Dalías (Almería, Spain). The most frequently encountered pesticides were endosulfan sulfate and metalaxyl, whereas the pesticide found at the highest concentration was fenamiphos.     

A study of resonance electron capture ionization on a quadrupole tandem mass spectrometer

Procedures that allow the realization of resonance electron capture (REC) mode on a commercial triple-quadrupole mass spectrometer, after some simple modifications, are described. REC mass spectrometry (MS) and tandem mass spectrometry (MS/MS) experiments were performed and spectra for some compounds were recorded. In particular, the charge-remote fragmentation (CRF) spectra of [M - H](-) ions of docosanoic and docosenoic acids under low-energy collisionally activated dissociation (CAD) conditions were obtained, and showed that there were no significant differences for [M - H](-) ions produced at different resonances (i.e. for [M - H](-) ions with different structures). This observation was explained on the basis of results obtained from deuterium-labeled fatty acids, which showed that different CRF ions (but with the same m/z value in the absence of labels) could be produced by different mechanisms, and all of them were obviously realized under CAD conditions that made spectra practically indistinguishable. The other example, which compared the REC-MS/MS spectrum of [M - H](-) ions and EI-MS/MS spectrum of M(+.) ions of daidzein, demonstrated the potential of the REC-MS/MS technique for more complex structure elucidation.     

Mass spectra of negative ions from thiophane and its alkyl derivatives

The mass spectra of the negative ions from the dissociative capture of electrons were obtained for thiophane and its alkyl derivatives. With a few exceptions, all of these negative ions of the spectrum contain sulfur atoms: electron capture is not observed in cyclic compounds — cyclopentane and methylcyclopentane. The principle routes of dissociation during electron capture were isolated for thiophane and alkylthiophanes and explain the greater portion of the observed lines.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 12, pp. 1631–1632, December, 1971.     

Dissociative double electron capture,dynamics of fragmentation of the water and hydrogen sulfide negative ions

The technique of ion kinetic energy spectrometry has been used to observe the unimolecular decompositions of H₂O^?? and H₂S^?? generated by charge exchange of the corresponding high velocity positive ions. The method involves dissociative double electron capture by a high velocity ion and allows the study of unstable negative ions that may be directly observable by conventional electron capture techniques. Information on the energetics of the reaction is obtained from the kinetic energy of the product ion. The reactions under consideration are shown in (1) and (2) where X = O or S.

The kinetic energy releases accompanying the reactions given in (1) and (2) have been measured and compared to those for the collision-induced reactions which produce the corresponding positive ions. The results have been used to deduce that the sequence of steps in the formation of the fragment negative ions is that given in (1) and (2). The cross section of OH^? formation is observed to be somewhat greater than for O^? production. This result is in contrast with dissociative electron capture cross sections from the neutral species and is interpreted on the basis of the energetic requirements for the reactions under consideration. H₂O^? reacts from different electronic states in yielding OH^? on the one hand and O^? on the other. The energy partitioning associated with reaction (2) suggests that the neutral productions 2H' rather than H₂. The kinetic energy losses accompanying excitation and kinetic energy releases upon fragmentation were similar for the corresponding reactions of the sulfur and oxygen-containing ions indicating related mechanisms in the two sets of reactions.     

Resonant electron capture negative ion mass spectrometry: the state of the art and the potential for solving analytical problems

Russian Chemical Bulletin - Resonant electron capture negative ion mass spectrometry (REC NI MS) is a highly informative method of investigation of low-energy electron-molecule reactions,...     

Electron capture negative ion (ECNI) mass spectrometry of complex mixtures of chlorinated decanes and dodecanes: An approach to ECNI mass spectra of chlorinated paraffins in technical mixtures

The electron capture negative ion (ECNI) mass spectra of two complex mixtures of polychlorinated decanes (PCDe) and polychlorinated dodecanes (PCDo) are presented. The number of isomers in these mixtures is still high but is drastically reduced in comparison to technical products of chlorinated paraffins (CP), due to their fixed chain length. As a result, the mass spectra are simplified and less complex. Different modes of negative ion formation were observed in the spectra of the PCDe and PCDo. [M+Cl]^– adduct ions were the most abundant ions in the spectra of lower chlorinated molecules. Higher chlorinated isomers formed prominently [M-Cl]^– and [M-HCl]^– fragments besides [M+Cl]^–. Possible consequences for the determination of chlorinated paraffins by ECNI-MS that result from the variation in ion formation are addressed. Received: 18 August 1997 / Revised: 26 January 1998 / Accepted: 31 January 1998     

Electron capture negative ion (ECNI) mass spectrometry of complex mixtures of chlorinated decanes and dodecanes: An approach to ECNI mass spectra of chlorinated paraffins in technical mixtures

The electron capture negative ion (ECNI) mass spectra of two complex mixtures of polychlorinated decanes (PCDe) and polychlorinated dodecanes (PCDo) are presented. The number of isomers in these mixtures is still high but is drastically reduced in comparison to technical products of chlorinated paraffins (CP), due to their fixed chain length. As a result, the mass spectra are simplified and less complex. Different modes of negative ion formation were observed in the spectra of the PCDe and PCDo. [M+Cl]^– adduct ions were the most abundant ions in the spectra of lower chlorinated molecules. Higher chlorinated isomers formed prominently [M-Cl]^– and [M-HCl]^– fragments besides [M+Cl]^–. Possible consequences for the determination of chlorinated paraffins by ECNI-MS that result from the variation in ion formation are addressed.     

Studies in negative ion mass spectrometry. IX—electron capture by a series of tris- and bis-(dipivaloylmethanato) metal chelates

Electron capture data and negative ion mass spectra are reported for a series of tris- and bis-chelates of the types Metal·L₃, Metal·L₂, where L (or dpm) refers to the ligand or enolate ion of the β-diketone 2,2,6,6-tetramethyl-3,5-heptanedione (dipivaloylmethane) and the metals are: Sc(III), Cr(III), Mn(III), Fe(III), Co(III), Al(III), Ga(III), In(III), Co(II), Ni(II), Cu(II), Zn(II). The spectra were all very simple and the principal ions observed in all cases were the molecular anions and ligand ions. Reaction schemes have been established to account for the formation of ligand and other fragment ions, many of which carried less than 0.1% of the total ion currents. Variations in the negative ion mass spectra are attributed to the influence of the metal atom and its 3d electron configuration on the electron capture process. The simplicity of the negative ion mass spectra, together with the fact that many of these metal chelates gave relatively high total ion currents of c. 10^?9–10^?10 A, indicates the potential value of negative ion mass spectrometry in the area of ultra-trace metal analysis, and some estimates of detection limits for some of the metals considered in this study have been made.