(1)H relaxation times of metabolites in biological samples obtained with nondestructive ex-vivo slow-MAS NMR

Methods suitable for measuring (1)H relaxation times such as T(1), T(2) and T(1rho) of metabolites in small, intact biological objects including live cells, excised organs and tissues, oil seeds etc. are developed in this work. This was achieved by combining inversion-recovery, spin-echo, or a spin-lock segment with the phase-adjusted spinning sideband (PASS) technique, which was applied at low sample-spinning rates. Here, PASS was used to produce high-resolution (1)H spectra in a nondestructive way so that the relaxation parameters of individual metabolite could be determined. The methodologies were demonstrated by measuring (1)H T(1), T(2), and T(1rho) of metabolites in excised rat liver at a spinning rate of 40 Hz.     

1H and 13C NMR spectra of Strychnos alkaloids: Selected NMR updates

The PBE0/pcSseg-2//pcseg-2 calculations of ¹H and ¹³C NMR chemical shifts were performed for a classical series of 12 Strychnos alkaloids (except for the earlier studied parent strychnine), namely akuammicine, isostrychnine, rosibiline, tsilanine, spermostrychnine, diaboline, cyclostrychnine, henningsamide, strychnosilidine, strychnobrasiline, holstiine, and icajine. It was found that the calculated ¹H and ¹³C NMR chemical shifts show markedly good correlations with available experimental data, as characterized by a mean absolute error of 0.22 ppm for the range of 8 ppm for protons and 1.97 ppm for the range of 180 ppm for carbons. Complementarily, the present results provide essential NMR update and fill a gap in the NMR data of this distinguished group of vitally important natural products.     

Assignments of 1H and 13C NMR spectral data for ondansetron and its two novel metabolites, 1-hydroxy-ondansetron diastereoisomers

Assignments of 1H and 13C NMR chemical shifts were made by means of heteronuclear single quantum coherence (HSQC) and heteronuclear multiple bond correlation (HMBC) experiments for ondansetron, and by means of 1H-1H correlation spectroscopy (1H-1H COSY) and two-dimensional nuclear Overhauser effect spectroscopy (NOESY) experiments for two novel metabolites (M1 and M2) of ondansetron. These two metabolites were isolated for the first time from Mucor circinelloides.     

Amidomethylation of phenanthridines: Synthesis and structure determination by 1H NMR

Phenanthridine reacts with N-(hydroxymethyl)phthalimide to give, in two steps, three monosubstituted aminomethylphenanthridines. The three isomers were separated by chromatography on silica gel. The position of substitution was determined using one- and two-dimensional ¹H nmr methods.     

应用^1H NMR法比较7种海藻酸钠序列结构

海藻酸钠的质量和应用与其序列片段比例密切相关,该研究将海藻酸钠温和水解成20个单体长度的片段后,采用1H NMR法分别测定了7种不同来源海藻酸钠样品的序列结构含量,图谱数据分析显示3种来源相同、粘度不同的国产样品M/G比例差别不大,分别为1.55(220 cps)、1.74(430 cps)和1.58(530 cps);而4种进口样品因来源不同,其比例差别较大,分别为1.35(Kecosol)、0.47(DMB)、1.14(LVCR)和1.42(HVCR).7种样品的η值均为0 ～1,表明其结构以嵌段共聚为主,其中DMB型号的样品以GG嵌段居多,而其余6种均以MM嵌段居多.此结果表明采用核磁共振法可以较准确地测定海藻酸钠的序列结构及其各片段的比例,方法可用于海藻酸钠的质量控制,对其药用具有实际指导意义.     

1H NMR及Raman光谱法研究十二烷基甜菜碱缔合体系的微观结构

采用＾１ＨＮＭＲ法研究了十二烷基甜菜碱,苯甲醇,水形成胶束的微观结构,推测苯甲醇在胶束中的增溶位置,发现在由Ｏ／Ｗ向Ｗ／Ｏ型的转变过程中存在过渡结构,其分子排列有序,光学上呈向向同性,称之为拟液晶结构。     

Gluco-indole alkaloids from the bark of Nauclea diderrichii. 1H and 13C NMR assignments of 3alpha-5alpha-tetrahydrodeoxycordifoline lactam and cadambine acid

Detailed (1)H and (13)C NMR assignments of 3alpha-5alpha-tetrahydrodeoxycordifoline lactam and cadambine acid, isolated from the bark of the Nauclea diderrichii (de Wild.) Merr. (Rubiaceae) were achieved by 1D and 2D techniques such as DEPT, HMBC, HMQC, COSY and NOESY.     

Automated annotation and quantification of metabolites in <Superscript>1</Superscript>H NMR data of biological origin

In ¹H NMR metabolomic datasets, there are often over a thousand peaks per spectrum, many of which change position drastically between samples. Automatic alignment, annotation, and quantification of all the metabolites of interest in such datasets have not been feasible. In this work we propose a fully automated annotation and quantification procedure which requires annotation of metabolites only in a single spectrum. The reference database built from that single spectrum can be used for any number of ¹H NMR datasets with a similar matrix. The procedure is based on the generalized fuzzy Hough transform (GFHT) for alignment and on Principal-components analysis (PCA) for peak selection and quantification. We show that we can establish quantities of 21 metabolites in several ¹H NMR datasets and that the procedure is extendable to include any number of metabolites that can be identified in a single spectrum. The procedure speeds up the quantification of previously known metabolites and also returns a table containing the intensities and locations of all the peaks that were found and aligned but not assigned to a known metabolite. This enables both biopattern analysis of known metabolites and data mining for new potential biomarkers among the unknowns.     

Holmium Complex with Phospholipids as 1H NMR Relaxational Sensor of Temperature and Viscosity

The sensitivity of Ho–phospholipid complexes to changes in the membrane viscosity of liposomes was checked. An increase in viscosity was observed for DPPC and DMPC near the phase-transition temperature. Ho–phospholipid complexes could be used as sensors of local membrane viscosity in NMR and MRI technologies.     

1H and 13C NMR studies of lanthanide complex with 5-sulfosalicylic acid

In this paper, paramagnetic shifts have been measured for all ¹H and ¹³C nuclei of 5-sulfosalicylic acid (SSA) in the presence of the lanthanide ions in the second half of the series. The ligand forms isostructural complexes with these ions in aqueous solution. The separation of LISs was carried out by the use of the Reilley method and the calculated dipolar shifts were used to simulate the coordination structure of the complex. The result reveals that SSA is coordinated to lanthanide ion via two oxygens, one from the carboxylic group and the other from the phenolic group with Ln–O bond lengths equal to 2.47 Å. The lanthanide ion lies on the benzene plane and the carboxylic group is twisted 20° from the benzene ring. Of all the nuclei examined, those in the six-membered chelate ring experience significant dipolar interactions and contact interactions. Small |G/A| ratios were obtained for two protons five bonds away from the central lanthanide ion, which shows that the number of bonds alone cannot be used as a criterion for neglecting contact shifts in aromatic ligand.     

Aggregation behavior of fluorocarbon and hydrocarbon cationic surfactant mixtures: a study of 1H NMR and 19F NMR

The aggregation behavior and the interaction of four mixed systems for a cationic fluorocarbon surfactant, diethanolheptadecafluoro-2-undecanolmethylammonium chloride (DEFUMACl), mixing with cationic hydrocarbon surfactants, alkyltrimethylammonium chloride, CnTACl (n=12, 14, 16, and 18; where n=12 is DTACl, n=14 is TTACl, n=16 is CTACl, and n=18 is OTACl), were studied by 1H and 19F NMR in more detail. The results of 19F NMR measurements strongly indicate that in the three mixed systems of DEFUMACl/DTACl, DEFUMACl/TTACl, and DEFUMACl/CTACl at different molar fractions of fluorocarbon surfactant (alphaF=(cDEFUMACl/cDEFUMACl+cCnTACl)), with an increase of the total concentration of fluorocarbon and hydrocarbon surfactants (cT=cF+cH), the mixed micelles at the first break point and the individual DEFUMACl micelles at the second break point form. However, three different types of micelles were determined in DEFUMACl/OTACl mixtures by 19F NMR measurements, OTACl-rich and DEFUMACl-rich mixed micelles and individual DEFUMACl micelles, respectively. The chemical shifts of proton Deltadelta (1H) for -CH3 in the mixed systems of DEFUMACl/CnTACl (n=12, 14, 16, and 18) have different variation trends from the 19F NMR measurements. For the two systems of DEFUACl/DTACl and DEFUMACl/TTACl, the mixed micelles form at the first break point. At the second break point, for lower alpha F values the DTACl-rich and TTACl-rich mixed micelles form with a strong downfield shift and for higher alpha F values DEFUMACl-rich mixed micelles form with a strong upfield. For the other two systems of DEFUMACl/CTACl and DEFUMAC/OTACl, the chemical shifts of proton Deltadelta (1H) of -CH3 increase with an increase of the total concentration of DEFUMACl/CTACl or OTACl, and mixed CH- and CF-surfactant micelles form. At higher total concentration, the greater effect of fluorinated chains of DEFUMACl on CH-chains was obvious, resulting in the strong upfield chemical shifts. In cationic fluorocarbon and hydrocarbon surfactant mixtures, the different kinds of micelles observed by 19F and 1H NMR measurements could be caused by the increase in alkyl chain length of hydrocarbon surfactants with different critical micelle concentrations. Combining two theoretical models for mixing, for the four different chain-length hydrocarbon surfactants studied, one can conclude that the two components of mixtures interact with each other and form mixed micelles in two completely different ways according to their molecular properties and cmc values in a certain range of total concentrations. One is close to an ideal mixing case with the formation of one type of mixed micelles, such as the DEFUMACl/DTACl and DEFUMACl/TTACl systems. The other is a demixing case with the formation of two types of micelles, i.e., fluorocarbon-rich and hydrocarbon-rich mixed micelles, such as DEFUMACl/CTACl and DEFUMACl/OTACl systems. However, as the total concentrations of the mixed systems are high enough, the four systems tend to demix and to form individual micelles of corresponding components due to the initial respective interaction between fluorocarbon and hydrocarbon chains. That is to say, at high total concentration, the individual DEFUMACl micelles in all four systems could form. These results may be primarily directed toward acquiring an understanding of the mechanism of CF-CH mixtures in aqueous solution and secondarily directed toward providing more detailed information on nonideal mixing.     

Complexes of diphenylarsinic acid and phenylarsonic acid with thiols: a 1H and 13C NMR study

The high toxicity of diphenylarsinic acid, found in ground water and well water as a probable consequence of the inappropriate disposal of warfare agents, prompted us to study the reaction, monitored by 1H and 13C NMR spectroscopy, of the compound and its monophenyl analogue, phenylarsonic acid, with cellular thiols as represented, in particular, by glutathione. Glutathione reduced the phenylarsenic acids to trivalent forms and complexed them: diphenylarsinic acid to a monoglutathione adduct and phenylarsonic acid to a diglutathione adduct. The complexes were characterized by 1H and 13C NMR spectroscopy and mass spectrometry. The NMR spectra showed the diastereotopic nature of the two phenyl groups in the diphenylarsinic acid-glutathione compound, and of the two glutathione residues in the phenylarsonic acid-diglutathione complex. The stereochemistry of thiol compounds of phenylarsonic acid was further explored by 1H and 13C NMR spectroscopy of the L-cysteine complex. The diphenylarsinic acid-glutathione complex was stable below pH 12 but at higher pH the complex dissociated into diphenylarsinous acid and reduced glutathione. The released diphenylarsinous acid then oxidized to diphenylarsinic acid with a half-life of about 7 h at pH 13 and at room temperature.     

Analysis of 1H NMR spectra of fluorene and azafluorenes: Long-range coupling constants

Analyses of the ¹H NMR spectra of fluorene, 2-nitrofluorene, 1-azafluorene, 2-azafluorene, 4-azafluorene, 7-nitro-4-azafluorene and 1,4-diazafuorene have been carried out using computer calculations and homo double resonance techniques. The relative signs and magnitude of the ⁴J, ⁵J and ⁶J long-range coupling constants of the 9-CH₂ group protons with the pyridine and phenylene ring protons have been measured by five- and six-spin calculations. It was established that the presence of substituents and the N heteroatom has only a very weak effect on the values and signs of these coupling constants. The usual alternating signs of long-range coupling constants involving π-electron systems were confirmed, giving negative signs for even and positive signs for odd numbers of bonds separating the coupling protons.     

1H and 13C NMR study of vinyl chloride telomers with carbon tetrachloride

The ¹H and ¹³C NMR spectra of some vinyl chloride telomers have been analysed.     

1H NMR studies of aerosol-OT reverse micelles with alkali and magnesium counterions: preparation and analysis of MAOTs

Simple procedures and characterization of a series of well-defined precursors are described for preparation of a unique microenvironment in nanoreactors, reverse micelles. The Na(+), K(+), Rb(+), Cs(+), and Mg(2+) surfactants were prepared using liquid-liquid ion exchange using chloride and nitrate salts. The surfactants were characterized using (1)H NMR spectroscopy and a variety of other techniques. (1)H NMR spectroscopy was found to be a sensitive probe for characterization of the size of the nanoreactor as well as its water content. (1)H NMR spectra can be used for detailed characterization of reactions in confined environments when counterion effects are likely to be important. (1)H NMR spectroscopy revealed two separate peaks corresponding to water in Mg(AOT)2 samples; one peak arises from water coordinated to the Mg(2+) ion while the other peak arises from bulk water. The two water signals arise directly from the slow exchange of the water coordinated to Mg(2+) in these microemulsions with water in the water pool, and provide an opportunity to study hydration of Mg(2+). This work thus extends the potential use of MAOT microemulsions for applications such as in green chemistry.     

Dynamics and conformations of PEO chains chemically bonded on silica: comparison between 1H and 2H NMR

1H NMR was used to study the motion of monomer units in a layer of poly(ethylene oxide) chains grafted on silica. First, the dependence of the relaxation times on the grafting ratios is discussed qualitatively from a phenomenological point of view. Next, the NMR line narrowing effect by high-speed rotation is observed in the same samples with different grafting ratios. The magic angle spinning technique permits determination of two correlation times for each grafting ratio: tau(c) characteristic of an environment with a fast motion and tau(l) characteristic of an environment with a slow motion. In addition, the dynamics of these grafted chains are investigated by deuterium NMR (2H NMR), which is sensitive to the anisotropy of molecular motion. The evolution has been studied for two extreme grafting ratios and each time as a function of temperature. The anisotropy is more marked at low temperatures and for a low grafting ratio. The results are consistent with the 1H NMR relaxation times measured as a function of temperature.     

Towards the automatic analysis of NMR spectra: part 7. Assignment of 1H by employing both 1H and 1H/13C correlation spectra

A reliable method of automatically assigning one-dimensional proton spectra is described. The method relies on the alignment of the proton spectrum with an associated heteronuclear single-quantum coherence (HSQC) spectrum, transferring the stoichiometry and couplings to the HSQC. The HSQC spectrum is then assigned using a linear assignment procedure in which a fitness function incorporating (1)H chemical shifts, (1)H couplings and (13)C shifts are employed. The method uniquely employs a sequential procedure in which only correlations of like stoichiometry are assigned at the same time.