Organotin mefenamic complexes—preparations,spectroscopic studies and crystal structure of a triphenyltin ester of mefenamic acid: novel anti‐tuberculosis agents

The triphenyltin adduct of mefenamic acid, [SnPh₃L] ( 1 ), the monophenyltin complex [PhSnOL] _n ( 2 ), and the dibutyltin complex [SnBu₂L₂] (3), where HL is 2‐[bis(2,3‐dimethylphenyl)amino]benzoic acid (mefenamic acid), have been prepared and structurally characterized by means of vibrational, ¹H and ¹³C NMR spectroscopies. The crystal structure of 1 has been determined by X‐ray crystallography. X‐ray analysis revealed a pseudo‐pentacoordinated structure containing Ph₃Sn coordinated to the carboxylato group. The structural distortion is a displacement from the tetrahedron toward the trigonal bipyramid. Significant C? H–π interactions and intramolecular hydrogen bonds stabilize the structure 1. The polar imino hydrogen atom participates in intramolecular hydrogen bonds. Complex 1 is self‐assembled via C? H–π and stacking interactions. Vibrational and NMR data are discussed in terms of the crystal structure and the proposed structures for 1–3. Compounds 1 and 3 were tested for antimycobacterial activity against Mycobacterium tuberculosis H37Rv. Copyright © 2002 John Wiley & Sons, Ltd.     

Modular Synthesis of Triarylmethanes through Palladium‐Catalyzed Sequential Arylation of Methyl Phenyl Sulfone

Triarylmethanes, which are valuable structures in materials, sensing and pharmaceuticals, have been synthesized starting from methyl phenyl sulfone as an inexpensive and readily available template. The three aryl groups were installed through two sequential palladium‐catalyzed C? H arylation reactions, followed by an arylative desulfonation. This method provides a new synthetic approach to multisubstituted triarylmethanes using readily available haloarenes and aryl boronic acids, and is also valuable for the preparation of unexplored triarylmethane‐based materials and pharmaceuticals.     

N‐Ethylazatribenzo‐21‐crown‐7

The structure of the title compound, 25‐ethyl‐2,5,12,15,22,28‐hexa­oxa‐25‐aza­tetra­cyclo­[27.4.0.0^6,11.0^16,21]­tri­tria­conta‐1(29),6(11),7,9,16(21),17,19,30,32‐nona­ene, C₂₈H₃₃NO₆, does not exhibit a binding cavity for cations, but is collapsed in on itself. The conformation is unique among known tri­benzo‐21‐crown‐7 structures, and may be a result of intermolecular (C—H?π) and intramolecular (C—H?O) hydrogen bonding.     

Rhodium(III)‐Catalyzed ortho‐Heteroarylation of Phenols through Internal Oxidative CH Activation: Rapid Screening of Single‐Molecular White‐Light‐Emitting Materials

Reported herein is the first example of a transition‐metal‐catalyzed internal oxidative C? H/C? H cross‐coupling between two (hetero)arenes through a traceless oxidation directing strategy. Without the requirement of an external metal oxidant, a wide range of phenols, including phenol‐containing natural products, can undergo the coupling with azoles to assemble a large library of highly functionalized 2‐(2‐hydroxyphenyl)azoles. The route provides an opportunity to rapidly screen white‐light‐emitting materials. As illustrative examples, two bis(triphenylamine)‐bearing 2‐(2‐hydroxyphenyl)oxazoles, which are difficult to access otherwise, exhibit bright white‐light emission, high quantum yield, and thermal stability. Also presented is the first example of the white‐light emission, in a single excited‐state intramolecular proton transfer system, of 2‐(2‐hydroxyphenyl)azoles, thus highlighting the charm of C? H activation in the discovery of new organic optoelectronic materials.     

Electron‐Deficient Tetrabenzo‐Fused Pyracylene and Conversions into Curved and Planar π‐Systems Having Distinct Emission Behaviors

Polycyclic aromatic compounds containing fully unsaturated five‐membered ring(s) have been intensively studied because of their unique properties, which include high electron affinity and reactivity. Reported herein is an efficient route for the synthesis of tetrabenzo‐fused pyracylene, which comprises pyracylene and tetracene segments, using intramolecular oxidative C? H coupling. It was shown to possess high electron affinity and was found to undergo addition reactions with n‐butyllithium or benzyne. These reactions led to either a 1,4‐addition compound or triptycene‐type adduct with a curved or planar π‐system, respectively. Although these compounds exhibited similar sky‐blue emissions in a dilute solution, the emission band of the 1,4‐addition compound was significantly red‐shifted in the solid state and exhibited intense yellow emission attributable to the excimer, while the triptycene‐type adduct retained the intense blue color emission in the solid state.     

Structural studies on aryl‐substituted enaminoketones and their thio analogues. Part I. Analysis of high‐resolution 1H, 13C NMR and 13C CP MAS spectra combined with GIAO‐DFT calculations

A series of aryl‐substituted enaminoketones and their thio analogues in CDCl₃ solution and in the solid state were studied by the use of high‐resolution ¹H and ¹³C as well as ¹³C cross polarization magic angle spinning (CP MAS) NMR spectra in combination with gauge including atomic orbitals‐density functional theory (GIAO‐DFT) calculations performed at the B3PW91/6–311 + + G(d,p) level of theory using the B3PW91/6‐311 + + G(d,p)‐optimized geometries. The analysis of the ¹³C NMR spectra in solution was done by using the Incredible Natural Abundance DoublE QUAntum Transfer Experiment (INADEQUATE) technique, whereas trends observed in the ¹³C shielding constants, calculated for the compounds studied, were a great help in assigning most of the signals in the ¹³C CP MAS NMR spectra. It was established on the basis of the experimental and theoretical NMR data that both groups of compounds exist in the form of Z‐s‐Z‐s‐E isomers in CDCl₃ solution as well as in the solid state, with the NH hydrogen atom involved in intramolecular hydrogen bonding. This conclusion is in agreement with the fact that some of the compounds studied reveal liquid‐crystalline properties. Three‐bond H, H and C, H coupling constants measured in solution played a crucial role in the structure elucidation. Copyright © 2009 John Wiley & Sons, Ltd.     

Cation–Cation Pairing by NCH⋅⋅⋅O Hydrogen Bonds

The pairing of ions of opposite charge is a fundamental principle in chemistry, and is widely applied in synthesis and catalysis. In contrast, cation–cation association remains an elusive concept, lacking in supporting experimental evidence. While studying the structure and properties of 4‐oxopiperidinium salts [OC₅H₈NH₂]X for a series of anions X^? of decreasing basicity, we observed a gradual self‐association of the cations, concluding in the formation of an isolated dicationic pair. In 4‐oxopiperidinium bis(trifluoromethylsulfonyl)amide, the cations are linked by N? H???O?C hydrogen bonds to form chains, flanked by hydrogen bonds to the anions. In the tetra(perfluoro‐tert‐butoxy)aluminate salt, the anions are fully separated from the cations, and the cations associate pairwise by N? C? H???O?C hydrogen bonds. The compounds represent the first genuine examples of self‐association of simple organic cations based merely on hydrogen bonding as evidenced by X‐ray structure analysis, and provide a paradigm for an extension of this class of compounds.     

Color Polymorphism: Understanding the Diverse Solid‐State Packing and Color in Dimethyl‐3,6‐dichloro‐2,5‐dihydroxyterephthalate

Dimethyl‐3,6‐dichloro‐2,5‐dihydroxyterephthalate (MCHT) is known to exist in three differently packed crystals having three different colors, namely yellow (Y), light yellow (LY), and white (W). Apart from the difference in their color, the molecules in the crystals also differ in their intramolecular O?H???O and O?H???Cl hydrogen bonds. Time‐dependent DFT calculations reveal the role of the various types of hydrogen bonds in controlling the color of the polymorphs. Mechanistic pathways that lead to such transformations in the crystal are elucidated by solid‐state dispersion‐corrected DFT studies. Relative stabilities of the various polymorphs rationalize the experimentally observed transformations between them. Calculations reveal that the minimum‐energy pathway for the conversion of the Y form to a W form is through stepwise disrotatory motion of the two ?OH groups through a hybrid intermediate having one intramolecular O?H???O and one O?H???Cl bond. The LY form is shown to exist on the higher‐energy pathway involving a concerted Y→W transformation.     

Molecular hydrogen tweezers: structure and mechanisms by neutron diffraction, NMR, and deuterium labeling studies in solid and solution

The mechanism of reversible hydrogen activation by ansa-aminoboranes, 1-N-TMPH-CH(2)-2-[HB(C(6)F(5))(2)]C(6)H(4) (NHHB), was studied by neutron diffraction and thermogravimetric mass-spectroscopic experiments in the solid state as well as with NMR and FT-IR spectroscopy in solution. The structure of the ansa-ammonium borate NHHB was determined by neutron scattering, revealing a short N-H···H-B dihydrogen bond of 1.67 ?. Moreover, this intramolecular H-H distance was determined in solution to be also 1.6-1.8 ? by (1)H NMR spectroscopic T(1) relaxation and 1D NOE measurements. The X-ray B-H and N-H distances deviated from the neutron and the calculated values. The dynamic nature of the molecular tweezers in solution was additionally studied by multinuclear and variable-temperature NMR spectroscopy. We synthesized stable, individual isotopic isomers NDDB, NHDB, and NDHB. NMR measurements revealed a primary isotope effect in the chemical shift difference (p)Δ(1)H(D) = δ(NH) - δ(ND) (0.56 ppm), and hence supported dihydrogen bonding. The NMR studies gave strong evidence that the structure of NHHB in solution is similar to that in the solid state. This is corroborated by IR studies providing clear evidence for the dynamic nature of the intramolecular dihydrogen bonding at room temperature. Interestingly, no kinetic isotope effect was detected for the activation of deuterium hydride by the ansa-aminoborane NB. Theoretical calculations attribute this to an "early transition state". Moreover, 2D NOESY NMR measurements support fast intermolecular proton exchange in aprotic CD(2)Cl(2) and C(6)D(6).     

A dimeric layered structure of a 4‐oxo‐4,5‐di­hydro‐1H‐pyrazolo­[3,4‐d]­pyrimidine compound

The title compound, 6‐methyl­sulfanyl‐1‐(3‐phenyl­propyl)‐4,5‐di­hydro‐1H‐pyrazolo­[3,4‐d]­pyrimidin‐4‐one, C₁₅H₁₆N₄OS, crystallizes in space group Pbca, with two mol­ecules of similar structure in the asymmetric unit. The molecular structure shows the absence of intramolecular stacking in the crystalline state, as indicated by earlier ¹H NMR analysis in solution. In addition, the crystal packing reveals the formation of a layered structure, due mainly to intermolecular N—H?O=C hydrogen bonding and arene–arene interactions.     

Polymorphs and Polymorphic Cocrystals of Temozolomide

Crystal polymorphism in the antitumor drug temozolomide (TMZ), cocrystals of TMZ with 4,4′‐bipyridine‐N,N′‐dioxide (BPNO), and solid‐state stability were studied. Apart from a known X‐ray crystal structure of TMZ (form 1), two new crystalline modifications, forms 2 and 3, were obtained during attempted cocrystallization with carbamazepine and 3‐hydroxypyridine‐N‐oxide. Conformers A and B of the drug molecule are stabilized by intramolecular amide N? H???N_imidazole and N? H???N_tetrazine interactions. The stable conformer A is present in forms 1 and 2, whereas both conformers crystallized in form 3. Preparation of polymorphic cocrystals I and II (TMZ?BPNO 1:0.5 and 2:1) were optimized by using solution crystallization and grinding methods. The metastable nature of polymorph 2 and cocrystal II is ascribed to unused hydrogen‐bond donors/acceptors in the crystal structure. The intramolecularly bonded amide N–H donor in the less stable structure makes additional intermolecular bonds with the tetrazine C?O group and the imidazole N atom in stable polymorph 1 and cocrystal I, respectively. All available hydrogen‐bond donors and acceptors are used to make intermolecular hydrogen bonds in the stable crystalline form. Synthon polymorphism and crystal stability are discussed in terms of hydrogen‐bond reorganization.     

Amino­pyrimidine–carboxyl­(ate) interactions in trimethoprim maleate,an antifolate drug

In the title cocrystal, trimethoprim maleate [2,4‐di­amino‐5‐(3,4,5‐tri­methoxy­benzyl)­pyrimidin‐1‐ium maleate], C₁₄H₁₉­N₄O₃⁺·­C₄H₃O₄^?, the trimethoprim mol­ecule is protonated at N1. The carboxyl group of the maleate ion makes a specific double hydrogen bond of type N—H?O with the 2‐amino group and the protonated N1 atom of the trimethoprim cation which is similar to the carboxyl­ate–trimethoprim cation interaction observed in the complex of di­hydro­folate reductase with trimethoprim. The pyrimidine moieties of trimethoprim cations are centrosymmetrically paired through a pair of N—H?N hydrogen bonds involving the 4‐amino group and the pyridinium N3 atom of a symmetry‐related molecule. One of the O atoms at the maleate carboxyl­ate group bridges the 2‐­amino and 4‐amino groups on either side of the paired trimethoprim cations. The other O atom of the carboxyl­ate group forms an intramolecular O—H?O hydrogen bond with the carboxyl group. These characteristic hydrogen bonds result in infinite two‐dimensional aggregation of rings into a supramolecular ladder, which is further crosslinked through weak C—H?O interactions with methoxy groups of neighbouring trimethoprim mol­ecules to form a layered structure.     

Blue‐shifted H‐bond in aromatic sulfines: An ab initio calculation

The intramolecular C? H···O?S H‐bond in the aromatic sulfines, HRC?S?O, was analyzed by NBO and QTAIM methods. The results of QTAIM analysis at the MP2/aug‐cc‐pVDZ level of theory show that the C? H···O?S H‐bond meets all the characteristics of an improper, blue shift hydrogen bond. NBO analysis at the MP2/6–31++G(d,p)//MP2/aug‐cc‐pVDZ level predicts a normal relationship between change of bond length and C? H rehybridization. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Synthesis and structure of novel spirosilanes. Combination of 1,2‐hydroboration and 1,1‐organoboration

The reaction of tetra(alkyn‐1‐yl)silanes Si(C?C‐R¹)₄ 1 [R¹ = ^tBu ( a ), Ph ( b ), C₆H₄‐4‐Me ( c )] with 9‐borabicyclo[3.3.1]nonane (9‐BBN) in a 1:2 ratio affords the spirosilane derivatives 5a – c as a result of twofold intermolecular 1,2‐hydroboration, followed by twofold intramolecular 1,1‐organoboration. Intermediates 3a–c , in which two alkenyl‐ and two alkyn‐1‐yl groups are linked to silicon, were identified by NMR spectroscopy. The molecular structure of the spiro compound 5c was determined by X‐ray analysis, and the solution‐state structures of products and intermediates follow conclusively from the consistent NMR spectroscopic data sets (¹H, ¹¹B, ¹³C and ²⁹Si NMR). Copyright © 2008 John Wiley & Sons, Ltd.     

Preparation and Intramolecular CC Coupling Reaction for Bis‐benzimidazolium Salt

Bis‐benzimidazolium salt 1 was prepared via a series of reactions using 2,2′‐diphenol as starting material. Compound 2 was afforded through the intramolecular C? C coupling reaction of 1 under the catalysis of Pd(OAc)₂. The structure of 2 is characterized through X‐ray diffraction analyses, ¹H NMR and ¹³C NMR. In 2 , two boat‐like seven‐membered rings are contained, where the C? C bond distance newly formed is 1.461(5) Å, and it is between regular C? C single bond (1.54 Å) and C?C double bond (1.34 Å). This shows that new C? C bond has partial double‐bond character. In the crystal packing of 2 , the 2D supramolecular layers are formed via C? H···F hydrogen bond.     

A General Approach to Site‐Specific,Intramolecular C−H Functionalization Using Dithiocarbamates

Intramolecular hydrogen atom transfer is an established approach for the site‐specific functionalization of unactivated, aliphatic C?H bonds. Transformations using this strategy typically require unstable intermediates formed using strong oxidants and have mainly targeted C?H halogenations or intramolecular aminations. Herein, we report a site‐specific C?H functionalization that significantly increases the synthetic scope and convergency of reactions proceeding via intramolecular hydrogen atom transfer. Stable, isolable N‐dithiocarbamates are used as precursors to amidyl radicals formed via either light or radical initiation to efficiently deliver highly versatile alkyl dithiocarbamates across a wide range of complex structures.     

Oligonucleotide Analogues with Integrated Bases and Backbone. Part 28

The protected hydrazide‐linked uracil‐ and adenine‐derived tetranucleoside analogues 17, 19 , and 21 were synthesized in solution by coupling the dimeric hydrazines 6 and 10 with the carboxylic acids 7, 11 , and 16 . These hydrazines and acids were obtained by partially deprotecting the hydrazines 5, 9 , and 15 , and these were prepared by coupling the hydrazines 3 and 14 with the carboxylic acids 4 and 8 . The crystal structure analysis of the fully protected UU dimer 5 showed the formation of an antiparallel cyclic duplex with the uracil units H‐bonded via H? N(3) and O?C(2). Stacking interactions were observed between the uracil units with a buckle twist of 30.9°, and between the uracil unit II and the fluoren‐9‐yl group of Fmoc (=9H‐fluoren‐9‐yl)methoxycarbonyl). The hydrazide H? N(3′) and the C?O group of Fmoc form an intramolecular H‐bond. The uracil‐ and adenine‐derived, water‐soluble hydrazide‐linked self‐complementary octamers 23 – 32 and the non‐self‐complementary uracil derived decamer 33 were obtained by coupling the carboxylic acids 4 and 8 on a solid support. ¹H‐NMR Analysis in CDCl₃, mixtures of CDCl₃ and (D₆)DMSO, and (D₈)THF showed that the partially deprotected dimers 5, 6, 12 , and 13 form weakly associated linear duplexes. The partially deprotected tetramers 17 and 18 do not associate. The hydrazide‐linked octamers 23 – 32 do not stack in aqueous solution, and the non‐self‐complementary decamer 33 does not stack with the complementary strands of DNA 43 and RNA 42 . The Cbz‐protected amide‐linked octamers 51 – 56 derived from uracil, adenine, cytosine, and guanine were obtained as the main products by solid‐phase synthesis from the carboxylic acids 46 – 49 . The fully deprotected amide‐linked octamers proved insoluble, and could neither be purified nor analysed.     

Palladium‐Catalyzed Construction of Heteroatom‐Containing π‐Conjugated Systems by Intramolecular Oxidative CH/CH Coupling Reaction

Synthesis of heteroatom‐containing ladder‐type π‐conjugated molecules was successfully achieved via a palladium‐catalyzed intramolecular oxidative C?H/C?H cross‐coupling reaction. This reaction provides a variety of π‐conjugated molecules bearing heteroatoms, such as nitrogen, oxygen, phosphorus, and sulfur atoms, and a carbonyl group. The π‐conjugated molecules were synthesized efficiently, even in gram scale, and larger π‐conjugated molecules were also obtained by a double C?H/C?H cross‐coupling reaction and successive oxidative cycloaromatization.     

1‐Silacyclopent‐2‐enes and 1‐silacyclohex‐2‐enes bearing functionally substituted silyl groups in 2‐positions. Novel electron‐deficient Si?H?B bridges

The reactions of alkyn‐1‐yl(vinyl)silanes R₂Si[C?C‐Si(H)Me₂]CH?CH₂ [R = Me (1a), Ph (1b)], Me₂Si[C?C‐Si(Br)Me₂]CH?CH₂ (2a), and of alkyn‐1‐yl(allyl)silanes R₂Si[C?C‐Si(H)Me₂]CH₂CH?CH₂ (R = Me (3a), R = Ph (3b)] with 9‐borabicyclo[3.3.1]nonane in a 1:1 ratio afford in high yield the 1‐silacyclopent‐2‐ene derivatives 4a, b and 5a, and the 1‐silacyclohex‐2‐ene derivatives 6a, b, respectively, all of which bear a functionally substituted silyl group in 2‐position and the boryl group in 3‐position. This is the result of selective intermolecular 1,2‐hydroboration of the vinyl or allyl group, followed by intramolecular 1,1‐organoboration of the alkynyl group. In the cases of 4a, b, potential electron‐deficient Si? H? B bridges are absent or extremely weak, whereas in 6a,b the existence of Si? H? B bridges is evident from the NMR spectroscopic data (¹H, ¹¹B, ¹³C and ²⁹Si NMR). The molecular structure of 4b was determined by X‐ray analysis. Copyright © 2005 John Wiley & Sons, Ltd.