Quantum chemical studies on electrophilic addition

The geometries of the 2-aminoethyl cation and the isomeric protonated aziridine have been optimized using ab initio molecular orbital calculations employing the split-valence shell 4-31G basis set. The protonated aziridine is computed to be the more stable ion by 46.5 kcal/mole (4-31G level) and 44.9 kcal/mole (double-zeta basis set). The profile to interconversion is found to have a barrier of less than 15 kcal/mole (relative to the 2-aminoethyl cation) and this profile is compared with those computed for the similar ions XCH₂CH ₂ ⁺ where X=OH, F, SH and Cl.     

Quantum chemical studies on electrophilic addition

The geometries of the 2-hydroxyethyl and isomeric oxiranium cations have been fully optimized using ab initio molecular orbital calculations employing the split valence shell 4-31G basis set. These species are possible intermediates in both the electrophilic addition of OH to ethylene and in the acid catalysed ring opening of oxirane. The optimized structures were then used to compute more accurate wave functions using Dunning's double-zeta basis set, and with this large basis set the bridged oxiranium ion was found to be the more stable by 7.2 kcal/mole. The barrier to interconversion of these two C₂H₄OH ions was computed to be 25.0 kcal/mole above the oxiranium ion.     

A quantum chemical study on electrophilic addition

Non-empirical SCF-MO calculations were carried out on two limiting structures of C₂H₄F⁺, corresponding to the cyclic and open valence tautomers, both of which are possible reaction intermediates of the electrophilic addition reaction of F₂ to CH₂ =CH₂. It was found that both species had thermodynamic stability, corresponding to two distinct minima on the energy surface. However, the 2-fluoroethyl carbonium ion showed a greater stability than the fluoronium ion by about 10 kcal/mole.     

Quantum chemical studies of ethylene addition to organoaluminium compounds

In terms of the MINDO/3 method, the surface potential energy of ethylene addition to AlH₃ and Al(CH₃)₃ has been calculated.

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MINDO/3 AlH₃ Al(CH₃)₃.

     

Quantum chemical studies on addition reactions of carbene with carbon monoxide and formaldehyde

MNDO method has been employed to study the reaction paths and to optimize the structures of the reactants, products and transition states of the addition reactions of carbene with carbon monoxide and formaldehyde available. Mechanisms have been obtained.     

Quantum chemical reaction networks,reaction graphs and the structure of potential energy hypersurfaces

Global properties of the Born-Oppenheimer energy expectation value functional, defined over the nuclear configuration space R, are analyzed. Quantum chemical reaction graphs and reaction networks are defined in terms of intersection graphs of connected sets of nuclear geometries, representing various chemical structures. The set of all possible reaction mechanisms on the given energy hypersurface and the associated activation energy conditions are analyzed using reachability matrices defined over digraphs D ^s() and D ^s(, E).     

Quantum chemical studies of peptide nucleic acid monomers and role of cyclohexyl modification on backbone flexibility

Peptide nucleic acids (PNA) bind sequence specifically to DNA/RNA and are of major interest for all fields of molecular biology and could form the basis for gene‐targeted drugs. Modifications are introduced in PNA to overcome problems associated with orientational selectivity in binding, to restrict conformational flexibility of backbone, and to discriminate binding for either DNA or RNA. The addition of geometrical isomers (1R,2S and 1S,2R) of cyclohexyl ring in the backbone of PNA could bring rigidification to PNA backbone and may impart specificity toward RNA. Therefore, quantum chemical studies are aimed to explore the conformational space, to find out preferred stable conformations of PNA and modified (1R,2S and 1S,2R) cyclohexyl PNA monomer. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Quantum chemical studies on 1 charged forms of nitroglycerine

Semiempirical quantum chemical calculations at the level of AM1 (UHF) method are performed on the neutral as well as 1 charged systems originated from nitroglycerine. The geometry optimized systems standing for 1 charged forms fragmented. All the neutral and charged systems are found to be stable and exothermic with the exception of cationic system which is endothermic in nature. The fragmentation occurs by the cleavage of ester O–N bond of the terminal ester group in the charged forms while in the cationic form also the rapture of C–C bond occurs.     

Quantum chemical studies on newly synthesized tin anticancer compounds

The electronic structure of newly synthesized tin anticancer complexes coordinating one, two and four tin atoms has been studied both at semiempirical level and by using ab initio methods at the correlation level. The most probable structures of the systems under consideration have been determined being in a good agreement with the relevant experimental results. The compounds show very effective antitumor cytotoxic activity against A549 and HSMC cells.     

Raman and infrared spectra, conformational stability, ab initio calculations and vibrational assignments for 2-chloroethyl silane

The infrared (3500–30 cm⁻¹) spectra of gaseous and solid and the Raman (3500–10 cm⁻¹) spectra of liquid with quantitative depolarization ratios and solid 2-chloroethyl silane, ClCH₂CH₂SiH₃, have been recorded. Similar data have been recorded for the Si–d₃ isotopomer. These data indicate that two conformers, trans and gauche, are present in the fluid states but only one conformer, trans, is present in the solid. The mid-infrared spectra of the sample dissolved in liquified xenon as a function of temperature (−55 to −100°C) has been recorded. The enthalpy difference between the conformers has been determined to be 181±12 cm⁻¹ (2.17±0.14 kJ/mol) with the trans rotamer the more stable form. From the isolated Si–H frequencies from the Si–d₂ isotopomer the r_o Si–H distances of 1.484 and 1.483 Å for the trans and 1.481 for the gauche conformers have been obtained. Ab initio calculations have been carried out with several different basis sets up to MP2/6-311+G** from which structural parameters and conformational stabilities have been determined. With all the basis sets the trans form is predicted to be the more stable conformer which is consistent with the experimental results. These results are compared to the corresponding quantities for the carbon analogue.     

Studies on electrophilic addition reaction of 2,3-allenoates with PhSeCl

β-Organoselenium substituted butenolides were prepared from 2,3-allenoates and PhSeCl in the presence of water. The yields of the products depend largely on the structures of 2,3-allenoates. The addition of water is crucial for some of this electrophilic cyclization. The reaction of simple unsubstituted methyl 2,3-butadienoate afforded methyl 4-chloro-3-phenylselanylbut-2(Z)-enoate in good yield and stereoselectivity.     

Quantum chemical study on the mechanism of the consecutive addition of HCN to aminoacetonitrile

MINDO/3 method has been used to study the mechanism of the consecutive addition ofHCN to aminoacetonitrile.The results obtained for the first three steps show that the reaction isexothermic,and step I is the rate determining step.     

Quantum chemical studies on antimalarial of artemisinin (qinghaosu) derivatives

In this paper theoretical studies were performed on artemisinin (qinghaosu) derivatives with semiempirical quantum chemical methods AMI and PM3. The antimalarial activity -logC has an obvious correlation with the net charge of C(16) and bond orders of bonds O(1)-C(10), O(2)-C(6), O(1)-O(2) and O(5)-C(16). According to the calculation results, we derived structure-activity relationship, presented the probable pharmacophore of qinghaosu derivatives and the interaction fashion between the drugs and the plasmodium receptor.     

Mo2C8簇的量子化学研究

用量子化学从头计算方法，研究了Ｍｏ２Ｃ８簇各种异构体的几何构型和电子结构。所得最稳定结构具有Ｃ２ｈ对称性，其中两个Ｍｏ原子直接相连且每个Ｍｏ还原与４个Ｃ原子相连。计算结果能较好地解释实验事实。     

Quantum chemical studies on the tautomerism of some potentially tautomeric aminoindazole derivatives

The aqueous phase AM1, PM3, and PM5 calculation data had indicated that when a potentially tautomeric amino group is placed at 3C position of the indazole ring the ring-chain tautomerism becomes feasible. However, when the amino group is placed at 4–7C of the indazole ring only the annular tautomerism was found to be feasible and no effect of amino group to provoke a ring chain tautomerism was observed. On the other hand amino form of 3 amino substituted indazole was found to be predominant over imino forms whereas for the 4–7 amino substituted indazoles imino forms were found to be predominant over amino forms. The attempt to apply soft–hard base and soft nucleophile–electrophile criteria to protonation and tautomerism phenomena was successful.     

Quantum chemical studies on structure of 1-3-dibromo-5-chlorobenzene

Molecular structure and vibrational frequencies of 1-3-dibromo-5-chlorobenzene (DBCB) have been investigated by density functional theory (DFT) calculations using Becke's three-parameter exchange functional combined with Lee–Yang–Parr correlation (B3LYP) and standard basis set 6-31G. DFT (B3LYP/6-31G) calculations have been performed giving energies, optimized structure, harmonic vibrational frequencies, IR intensities, and Raman activities. Raman and IR spectra of the DBCB were recorded and complete assignment of the observed vibrational bands of DBCB has been proposed. The predicted first-hyperpolarizability of DBCB is 1.221 × 10⁻³⁰ esu, which suggests that the title compound is an attractive object for future studies of non-linear optical properties. The impact of di-substituted halogens on the compound has also been discussed. Besides, molecular electrostatic potential (MEP), HOMO–LUMO analysis and NBO analysis were performed at DFT level of theory The UV–vis spectral analysis of DBCB has also been done which confirms the charge transfer of the title compound.     

Quantum chemical studies of azoles 3. Thermodynamic stabilities of neutral molecules and intermediates formed in electrophilic substitution of azoles containing three or four heteroatoms

Density functional theory quantum chemical calculations of thermodynamic stabilities in the gas phase and in water were carried out for 1,3,4-oxadiazole and 1,3,4-thiadiazole, 1,2,4-1H-triazole and 1,2,4-4H-triazole, 1,2,3,4-1H-tetrazole and 1,2,3,4-2H-tetrazole molecules, and for cationic and bipolar (carbenoid) intermediates formed by these molecules in electrophilic substitution reactions (with proton as model electrophile) and the results obtained are compared. Differences in the chemical behavior of pairs of isomeric 1H- and 4H-1,2,4-triazoles and 1H- and 2H-tetrazoles are analyzed.