Microfluidic chip-based valveless flow injection analysis system with gravity-driven flows

In this work, a microfluidic chip-based valveless flow injection analysis (FIA) system with gravity-driven flows and liquid-core waveguide (LCW) spectrometric detection was developed. Automated sample injection in the 0.3-6.4 nL range under gated injection mode was achieved by controlling the vertical position of the waste reservoir fixed on a moving platform and the residence time of the reservoir in each position, without the requirement of microvalves or electrokinetic manipulation. An integrated LCW spectrometric detection system was built on the chip by coupling a 20 mm-long Teflon AF 2400 capillary with the microchannel to function as a LCW flow cell, using a green LED as light source and a photodiode as detector. The performance of the system was demonstrated in the determination of [NO(2)](2-) based on the Saltzman reaction. Linear absorbance response was obtained in the range of 0.1-20 mg L(-1) (R(2) = 0.9910), and a good reproducibility of 0.34% RSD (n = 17) was achieved.     

A new approach to the integrated calibration in flow injection analysis

A new proposal how to perform the analytical procedure according to the integrated calibration method is presented. An original flow injection system has been designed for this purpose. When using only a single standard solution, the measurement information gathered during a single analytical course permits construction of four calibration graphs and calculation of as many as four independent estimations of the analyte concentration in the sample examined. As the calibration method applied integrates the set of standards method and the standard addition method, the analytical estimations may be obtained in both the interpolative and the extrapolative manner and the final result can be effectively verified in terms of accuracy. The system developed was experimentally tested on the example of spectrophotometric determination of chromium. It has been proved to be capable of saving time and reagents as well as providing reliable analytical results. Owing to the instrumental simplicity and analytical efficiency the system is expected to be useful for routine analysis.     

A microfluidic device with integrated fluorimetric detection for flow injection analysis

This work describes the development of flow analysis microsystems with integrated fluorimetric detection cells. Channels (width of 300–540 μm and depth of 200–590 μm) were manufactured by deep-UV lithography in urethane–acrylate (UA) resin. Plastic optical fibers (diameter of 250 μm) were coupled to a 2.0-mm-long detection channel in order to guide the excitation radiation from an LED (470 nm) and collect the emitted radiation at a right angle towards a photomultiplier. A single-line miniaturized system, with a total internal volume of 10.4 μL, was evaluated by means of standard fluorescein solutions (0.53–2.66 μmol L⁻¹, pH 8.5). The analytical signals presented a linear relationship in the concentration range studied, with a relative standard deviation of 1.9% (n = 5), providing a detection limit of 0.37 μmol L⁻¹ and an analytical frequency of 60 samples/h, using a flow rate of 60 μL min⁻¹. Optical microscopy images and videos acquired in real time for the hydrodynamic injection of 130 and 320 nL of sample solutions indicated the good performance of the proposed sampling strategy. Another microsystem with a total internal volume of 38 μL was developed, incorporating a confluence point for two solutions. This device was applied to the determination of the total concentration of Ca²⁺ and Mg²⁺ in commercial mineral waters using the calcein method. Microscopy images and videos demonstrated the mixing efficiency of the solutions in the microchannels. A linear relationship was observed for the analytical signal in the Ca²⁺ concentration range from 25 to 125 μmol L⁻¹, with relative standard deviations of 3.5%. The analysis of mineral waters with the proposed system provided results that did not differ significantly from those obtained by the EDTA titration method at a confidence level of 95%. These results demonstrate the viability of developing micro flow injection systems with an integrated fluorimetric detection cell.      

A valveless microfluidic device for integrated solid phase extraction and polymerase chain reaction for short tandem repeat (STR) analysis

A valveless microdevice has been developed for the integration of solid phase extraction (SPE) and polymerase chain reaction (PCR) on a single chip for the short tandem repeat (STR) analysis of DNA from a biological sample. The device consists of two domains--a SPE domain filled with silica beads as a solid phase and a PCR domain with an ~500 nL reaction chamber. DNA from buccal swabs was purified and amplified using the integrated device and a full STR profile (16 loci) resulted. The 16 loci Identifiler? multiplex amplification was performed using a non-contact infrared (IR)-mediated PCR system built in-house, after syringe-driven SPE, providing an ~80-fold and 2.2-fold reduction in sample and reagent volumes consumed, respectively, as well as an ~5-fold reduction in the overall analysis time in comparison to conventional analysis. Results indicate that the SPE-PCR system can be used for many applications requiring genetic analysis, and the future addition of microchip electrophoresis (ME) to the system would allow for the complete processing of biological samples for forensic STR analysis on a single microdevice.     

An integrated AC electrokinetic pump in a microfluidic loop for fast and tunable flow control

We have built a dedicated lab on a chip to study the performance of an integrated electrokinetic micropump, driven by a low voltage AC signal. This micropump consists of an array of interdigitated electrodes and is here integrated in a microfluidic loop. We demonstrate that this device can pump continuously and reproducibly electrolyte solutions of low to moderate ionic strength. The pumping speed reaches up to 500 [micro sign]m s(-1) in 20 [micro sign]m deep and 100 [micro sign]m wide channels with a driving signal in the 1-10 kHz range and an amplitude of only a few volts. In addition, we have observed an interesting reversal of the pumping direction at higher frequencies (50-100 kHz). Our device permits a systematic and automated exploration of the influence of the ionic strength thanks to an integrated micromixer.     

FAMBE-pH: a fast and accurate method to compute the total solvation free energies of proteins

A fast and accurate method to compute the total solvation free energies of proteins as a function of pH is presented. The method makes use of a combination of approaches, some of which have already appeared in the literature; (i) the Poisson equation is solved with an optimized fast adaptive multigrid boundary element (FAMBE) method; (ii) the electrostatic free energies of the ionizable sites are calculated for their neutral and charged states by using a detailed model of atomic charges; (iii) a set of optimal atomic radii is used to define a precise dielectric surface interface; (iv) a multilevel adaptive tessellation of this dielectric surface interface is achieved by using multisized boundary elements; and (v) 1:1 salt effects are included. The equilibrium proton binding/release is calculated with the Tanford-Schellman integral if the proteins contain more than approximately 20-25 ionizable groups; for a smaller number of ionizable groups, the ionization partition function is calculated directly. The FAMBE method is tested as a function of pH (FAMBE-pH) with three proteins, namely, bovine pancreatic trypsin inhibitor (BPTI), hen egg white lysozyme (HEWL), and bovine pancreatic ribonuclease A (RNaseA). The results are (a) the FAMBE-pH method reproduces the observed pK a's of the ionizable groups of these proteins within an average absolute value of 0.4 p K units and a maximum error of 1.2 p K units and (b) comparison of the calculated total pH-dependent solvation free energy for BPTI, between the exact calculation of the ionization partition function and the Tanford-Schellman integral method, shows agreement within 1.2 kcal/mol. These results indicate that calculation of total solvation free energies with the FAMBE-pH method can provide an accurate prediction of protein conformational stability at a given fixed pH and, if coupled with molecular mechanics or molecular dynamics methods, can also be used for more realistic studies of protein folding, unfolding, and dynamics, as a function of pH.     

Experimental and numerical analysis in heat flow sensors calibration

Journal of Thermal Analysis and Calorimetry - The 2010/31/CE directive has highlighted the necessity to improve the energy efficiency in buildings, since they are responsible for 40% of energy...     

A fast and accurate algorithm for QTAIM integration in solids

A new algorithm is presented for the calculation of atomic properties, in the sense of the quantum theory of atoms in molecules. This new method, named QTREE , applies to solid‐state densities and allows the computation of the atomic properties of all the atoms in the crystal in seconds to minutes. The basis of the method is the recursive subdivision of a symmetry‐reduced wedge of the Wigner‐Seitz cell, which in turn is expressed as a union of tetrahedra, plus the use of β‐spheres to improve the performance. A considerable speedup is thus achieved compared with traditional quadrature‐based schemes, justified by the poor performance of the latter because of the particular features of atomic basins in solids. QTREE can use both analytical or interpolated densities, calculates all the atomic properties available, and converges to the correct values in the limit of infinite precision. Several gradient path tracing and integration techniques are tested. Basin volumes and charges for a selected set of 11 crystals are determined as a test of the new method. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2011     

超高效液相色谱-飞行时间质谱快速分析人参根中的皂甙化合物

建立了超高效液相色谱-飞行时间质谱快速分析人参根部提取物中的皂甙类化合物的方法。色谱柱为HSS T3超高效液相色谱柱(100 mm×2.1 mm, 1.8 μm);以15 mmol/L甲酸铵水溶液-乙腈为流动相,采用二元梯度洗脱的方式对人参主根的皂甙提取物进行分离。基于待测目标物的多级质谱碎片离子、精确质量等信息,结合9种人参皂甙标准化合物的多级质谱碎片离子质谱图,共鉴定出人参主根提取物中27种皂甙类化合物。在确定的条件下,以9种人参皂甙标样为研究对象,进行了全面的方法学考察,发现它们的线性范围分别为0.33～9.00 mg/L (Rg1), 0.11～9.00 mg/L (Re), 0.02～2.00 mg/L (Rf), 0.07～6.00 mg/L (Rg2), 0.04～3.00 mg/L (Rb1, Rb3), 0.22～6.00 mg/L (Rc), 0.04～9.00 mg/L (Rb2, Rd);在中等加标浓度时,经内标物峰面积校正的9种皂甙标准化合物的峰面积的相对标准偏差(RSD)不高于11.3%;低、中、高3个质量浓度加标水平的回收率范围分别为90%～100%、98%～104%及96%～103%;最低检出限为3.5～18.5 μg/L。该方法具有高分辨、快捷、简便、可靠等特点,并成功地应用于分析同一产地、不同生长时间的人参干燥主根中皂甙的差异。可以预计此方法可进一步应用于各种人参原料和制品中皂甙的快速测定。     

Multisyringe flow injection analysis system for automation of standard addition calibration method

In the present work, the multi-channel features of multisyringe flow injection analysis (MSFIA) were exploited for the first time to implement calibration based on standard addition method (SAM). For this, standard solutions containing different concentrations of target analyte were placed in each syringe of the multisyringe and connected to a flow network where in-line mixing of sample and standard through a merging zone approach was established prior to detection of analyte. Using this strategy, artifacts reported before in SAM using flow injection analysis were avoided as the concentration of the analyte in the resulting mixture was related to the dilution of sample and added standard within the system, and the concentration of all matrix components was kept constant during all measurements. The feasibility of the proposed MSFIA system was assessed through application to potentiometric determination of chloride ion in electroplating bath and milk samples. Results obtained for samples (n = 15) were not statistically different from those provided by titrimetric procedures, with an excellent throughput (20–31 samples h^{− 1}), comprising four-level addition of chloride ion.     

Evaluation of an accurate calibration and spectral standardization procedure for Raman spectroscopy

Due to modern developments Raman spectroscopy has evolved into a fast vibrational technique. Detailed fingerprints in combination with non-destructivity and minimal sample preparation has allowed the construction of reference libraries in a variety of research fields. Long-term stability and comparability are important characteristics when developing reference libraries. In addition, small shifts in highly similar spectra of different samples may limit the full potential of Raman spectroscopy. Since libraries often contain a large number of different and/or highly similar spectra, it is important that each data point in all the spectra corresponds to the exact Raman wavenumber. This is often not the case, due to shifts in optical pathway and/or shifts in laser wavelength. This paper describes a complete calibration protocol (wavelength and intensity) and evaluates the procedure for both short and long term stability, by means of 60 randomly selected measurement sessions spread over a period of nine months. A two-step standardization procedure is proposed to deal with spectral shifts.     

Evaluation of single-point calibration in flow potentiometric stripping analysis

The use of a single-point calibration in flow potentiometric stripping analysis has been evaluated. For a number of sample matrices, the results obtained by calibration methods agree with those obtained by using standard addition. The most serious source of systematic error is inhibition in the deposition step, caused by organic surfactants and chelating agents in the sample matrix. Consequently, the use of the calibration method should be restricted to samples which have been totally mineralized. It is shown that most sources of systematic error in the calibration method will result in underestimation of the analyte concentration.     

A new method for fast and accurate derivation of molecular conformations

During molecular simulations, three-dimensional conformations of biomolecules are calculated from the values of their bond angles, bond lengths, and torsional angles. In this paper we study how to efficiently derive three-dimensional molecular conformations from the values of torsional angles. This case is of broad interest as torsional angles greatly affect molecular shape and are always taken into account during simulations. We first review two widely used methods for deriving molecular conformations, the simple rotations scheme and the Denavit-Hartenberg local frames method. We discuss their disadvantages which include extensive bookkeeping, accumulation of numerical errors, and redundancies in the local frames used. Then we introduce a new, fast, and accurate method called the atomgroup local frames method. This new method not only eliminates the disadvantages of earlier approaches but also provides lazy evaluation of atom positions and reduces the computational cost. Our method is especially useful in applications where many conformations are generated or updated such as in energy minimization and conformational search.     

快速高效液相色谱分离技术在中药分析中的应用

中药化学成分分析是中药药效物质阐明及质量控制的关键问题之一。由于中药化学成分的复杂性,中药成分分析一直存在着分离难度大、分析时间长等问题。为此,针对这些问题发展起来的快速、高效液相色谱技术(主要包括超高压液相色谱、基于整体柱的高效液相色谱和高温液相色谱)备受关注。本文结合本实验室近年的研究,对该技术在中药复杂体系化学成分分析中的应用做简要综述,内容主要包括这些技术的原理、分离性能及其在中药复杂体系中的应用。     

A fast and reliable route integrating calibration and analysis protocols for water-soluble vitamin determination on microchip-electrochemistry platforms

A novel analytical route to determine water-soluble vitamins (B group and C) using single channel microchip-electrochemistry platforms is presented. The electrochemical detection protocol was carefully optimized, and it was shown that it was crucial to use 1 M nitric acid in the detector compartment to detect folic acid. A phosphate buffer (pH 6, 10 mM) and a separation voltage of 2 kV gave the complete separation of vitamins in less than 130 s, with good reproducibility (RSDs less than 10%) and accuracy (error less than 9%). In addition, a methodological innovation integrating calibration and analysis of water-soluble vitamins on the chip is also proposed. The strategy consisted in sequentially using both reservoirs (named calibration and analysis reservoirs) as well as a calibration factor (defined as signal/concentration of analyte). The analytical route required 350 s in the overall protocol (employing 130 s in calibration plus 130 s in analysis), an improvement over the times used in both conventional and microchip protocols.     

A valveless switch for microparticle sorting with laminar flow streams and electrophoresis perpendicular to the direction of fluid stream

A simply designed valveless switch for microparticle sorting was fabricated on a glass chip. A successful sorting of 10 μm diameter polystyrene latex beads was performed by the microfluidic system consisted of a unique electrophoretic switch and pair of parallel laminar flow streams. In applying the voltage to the electrodes placed on the banks of the flow through channel, microparticles were electrophoretically diverted across the boundary between two distinct laminar flows.     

A single standard calibration module for flow analysis systems based on solenoid microdevices

Only two computer-controlled microsolenoid devices, namely two micropumps or one micropump and one microvalve, are sufficient for the construction of on-line dilution modules useful in several flow analytical systems for the calibration using single standard. Three simple constructions of such modules were tested and compared. The most promising is the one based on the concept of a microvalve controlling dilution ratio of the standard and a solenoid micropump playing a double role: solution pumping device and mixing segments homogenizer. All investigated modules were tested with paired emitter detector diode (PEDD) as photometric flow-through detector and bromothymol blue as a model analyte. The best module was implemented into more advanced flow-injection system dedicated for optical detection of alkaline phosphatase activity using UV-PEDD-based flow-through detector for the enzyme reaction product.     

基于超高效液相色谱-高分辨质谱和渗透压校正样本浓度变异性的尿液代谢组学分析

尿液是代谢组学研究中主要关注的体液样本之一。尿液样本中的代谢物浓度受饮食、疾病等因素影响变异较大,这极大阻碍了高质量组学数据的获取和可靠生物标志物的鉴定。研究为克服尿液样本的浓度变异性,在原始数据采集前,根据样本渗透压的大小,针对性地调整进样量或者稀释样本,从而确保代谢组学分析样本的渗透压与进样量的乘积相当,再经超高效液相色谱-高分辨质谱技术(UPLC-HRMS)分析,采用总离子丰度或总有用峰面积(MSTUS)对数据集进行归一化处理。研究利用临床样本及其梯度稀释的溶液,对该方法与现有研究普遍使用的方法进行了比较,随后通过先天性肾积水患者及健康志愿者的尿液样本做了进一步的方法学验证。数据集经校正后,峰面积RSD<30%的提取峰数量增加,主成分分析结果较校正前有更高的组内聚集和组间分群效应,正交偏最小二乘判别分析的统计模型更不易过拟合。与肌酐比较,渗透压值与质谱信号间呈现了更好的线性关系。以上结果表明,数据采集前通过样本渗透压进行校正,能有效消除因样本本身代谢物浓度变化引起的组内差异,提高方法的重复性和统计模型的可靠度。以渗透压为基准的校正策略,比肌酐校正法适用范围更广,结果也更准确。研究可对后续各类来源的尿液代谢组学研究提供数据归一化的指导和参考。     

An accurate and reproducible method for the quantitative analysis of isoflavones and their metabolites in rat plasma using liquid chromatography/mass spectrometry combined with photodiode array detection

To study the safety and potential health benefits of soy isoflavones, a rapid and simple method based on liquid chromatography combined with mass spectrometry (LC/MS) and photodiode array detector (PDA) was developed for the determination of isoflavones in rat plasma. The analytes included daidzein, genistein, glycitein, equol, 4-ethyl phenol, and biochanin A over a concentration range of 1.0-4320.0 nM using 75 microL of rat plasma. Rat plasma samples were hydrolyzed by adding an enzyme mixture from Helix pomatia containing glucuronidase and sulfatase to convert the isoflavone beta-glycosides daidzin, genistin, and glycitin to their active aglycone forms. A liquid-liquid extraction method using ethyl acetate as the extraction solvent was used to extract aglycones and the internal standards (phenolphthalein beta-D glucuronide, 4-methylumbelliferyl sulfate, and apigenin) from digested plasma samples. The extract was evaporated to dryness under a nitrogen stream, reconstituted with 0.1% formic acid in water-acetonitrile (85 + 15), and injected into a Zorbax SB-CN reversed-phase column (4.6 x 75 mm, 3.5 microm particle size). The Micromass ZQ detector was operated in the positive ion selected-ion monitoring mode. The flow rate for LC was 1.0 mL/min, with a split where 25% of the effluent was introduced into the electrospray ionization probe of the MS instrument and 75% into the PDA. The chromatographic run time was 16.0 min, with delay of 10 min/injection. The interday precision and accuracy of the standard samples were <2.6% relative standard deviation and <10% relative error, respectively. Recovery of the reported isoflavones with this method varied from 86 to 100%.