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1.
Abstract— The steady-state intensity and lifetime of the tryptophan phosphorescence from a number of globular proteins in 2:1 (v/v) glycerol buffer were monitored as a function of temperature. The phosphorescence lifetimes are essentially independent of the tryptophan local environment in rigid solution at temperatures < 170K, but vary markedly between proteins at temperatures at which the solutions become fluid. The ratio of steady-state intensity to lifetime P/τ was found to be temperature independent despite the quenching for free tryptophan and the lone residue in myelin basic protein. Heterogeneity in the triplet quenching of the tryptophans in liver alcohol dehydrogenase and alkaline phosphatase were revealed as step-like decreases in the ratio of P/T followed by plateau regions characterizing the homogeneous behavior of the more resistent tryptophans in the proteins. This heterogeneity exists not only between solvent-exposed and buried residues, but reflects variations in the flexibility of the structure surrounding distinct buried tryptophans in the globular proteins.  相似文献   

2.
Binding of sodium dodecyl sulfate (SDS) to bovine serum albumin (BSA) and human serum albumin (HSA) in aqueous solutions at room temperature induces significant changes in the phosphorescence lifetime of tryptophan (Trp) residues. A steep rise of the phosphorescence lifetime from 1.9 ms to 10.0 ms for BSA and from 1.9 ms to 5.5 ms for HSA is observed when the total SDS concentration increased from 0.0 mM to 0.22 mM at 1 mg/mL protein concentration. As the total SDS concentrationis further inccreased to 2.2 mM, a slower increase in the phosphorescence lifetime is observed, from 10.0 ms to 19.5 ms for BSA and from 5.5 ms to 7.2 ms for HSA. It appears that the phosphorescence lifetime modifications are mainly due to an increase of protein matrix rigidity around Trp residues. The observed differences (between HSA and BSA) allow us to distinguish the contribution of the two Trp residues to the BSA phosphorescence.  相似文献   

3.
Abstract— The phosphorescence of five globular proteins containing tryptophan residues was observed in deoxygenated neutral ethylene glycol-phosphate buffer (1:1 by volume) at 293 and 77 K. Their spectral features at 293 K are closely identical to those at 77 K apart from a lack of tyrosine phosphorescence at 293 K. and are independent of the excitation wavelength between 250 and 310 nm. From the present results. it can be concluded that the buried tryptophan residues are the only phosphorescing centers at room temperature. Their phosphorescence lifetimes were measured as a function of temperature in the range from 77 to 293 K. At room temperature, their phosphorescence lifetimes are between about 1 and 500 ms. On the basis of their temperature dependence, the heterogeneous tryptophan environments are discussed in terms of a temperature-activated nonradiative rate. We suggest that the observation of the phosphorescence characteristics of globular proteins containing tryptophan residues buried in the interior of the protein molecule at room temperature is likely to prove useful in probing the protein structure in solution.  相似文献   

4.
We report the observation of the redox state of the blue copper protein azurin on the single-molecule level. The fluorescence of a small fluorophore attached to the protein is modulated by the change in absorption of the copper center via fluorescence resonance energy transfer (FRET). In our model system, the fluorescence label Cy5 was coupled to azurin from Pseudomonas aeruginosa via cysteine K27C. The Cy5 fluorescence was partially quenched by the absorption of the copper center of azurin in its oxidized state. In the reduced state, absorption is negligible, and thus no quenching occurs. We report on single-molecule measurements, both in solution by using fluorescence correlation spectroscopy (FCS) combined with fluorescence intensity distribution analysis (FIDA), and on surfaces by using wide-field fluorescence microscopy.  相似文献   

5.
Fluorescence and phosphorescence resemble each other and in many ways can give the same type of information. Both originate from a dipolar interaction between light and the molecule. In this regard, both are polarized and subject to the same type of quenching phenomena. In other respects the information which they divulge are complementary. The fluorescence quantum yield is higher for exposed tryptophans and this is expressed in longer lifetime (Grinvald and Steinberg, 1976); in contrast long lifetime of phosphorescence appears to correlate with burial. Phosphorescence, spin-disallowed, is much longer lived than fluorescence. This allows the structural/dynamic characterization of proteins to be studied on a new time regime. A really remarkable finding of studies of protein phosphorescence is that there is such variability both in phosphorescence lifetime and quenchability. We would interpret this to indicate that the tryptophan environment can range from essentially a crystal, almost comparable in rigidity as found at 77 K, to tryptophans in a flexible environment, almost as flexible as free in solution. An interesting task will be to examine the relationship between the yield and lifetime of phosphorescence and details of the tryptophan environment in terms of rigidity and adjacent amino acids among the proteins with known three dimensional structure.  相似文献   

6.
An important feature of tryptophan phosphorescence, crucial for probing protein structure and dynamics, is the drastic reduction of the lifetime (tau) in fluid solutions. Initial reports of indole and derivatives showed that tau decreases from 6 s in rigid glasses to about 1 ms in aqueous solutions at ambient temperature. Recently a report by Fischer et al. questioned the validity of the millisecond lifetime, claiming that in millimolar electrolyte solutions tau is about 40 micros, similar to the 12-30 micros of earlier determinations based on flash photolysis. Longer lived phosphorescence was detected in pure water but because it exhibited an initial growing phase and an anomalously large triplet yield, the emission was attributed to an artifact arising from the slow, first-order, geminate recombination of the radical cation and electron generated by photochemistry. In this study, we reexamine both the phosphorescence lifetime and the triplet quantum yield of indole, N-acetyl tryptophanamide (NATA), N-methyl tryptophan and the tryptophan-glycine-glycine tripeptide under the same conditions adopted by Fischer et al. as well as over a wider range of electrolyte and buffering salts concentrations, pH, solvent and temperature. Throughout, the results show that the phosphorescence decay is slow and uniform down to the 12 micros resolution of the instrument, with no evidence of short-lived, 40 micros-like components. Most compelling was the similarity between the fluorescence-normalized triplet yield of indole derivatives in water and that of W59 in the protein ribonuclease T1 or of NATA in rigid glasses. Its invariance over experimental conditions that varied the production of photoproducts several fold and the characteristic susceptibility of the triplet lifetime to O2, proton and ground state quenching demonstrated that the triplet state was formed predominantly through normal intersystem crossing and that its unquenched lifetime was at least 9 ms.  相似文献   

7.
The reduced form of Pseudomonas aeruginosa azurin exhibits an enhanced absorbance in the UV compared to that of the oxidized protein. This enhancement has also been observed for azurins from other bacterial species and for another type I copper protein, plastocyanin. Pulsed laser excitation of the reduced azurin in the region of enhanced absorbance at 308 nm results in single photon, rapid (less than 30 ns) oxidation of the copper center and formation of the hydrated electron with a quantum yield of 0.05. The hydrated electron reacts in the expected manner with scavengers such as nitrous oxide, oxygen, acetone and nitromethane. In the absence of scavengers, the electron reacts with the protein, including the disulfide bond, to form the disulfide radical anion, observed at 410 nm. The overall photophysical event involves a charge-transfer to solvent transition although the existence of intermediate states can not be excluded.  相似文献   

8.
Many proteins in living cells coordinate cofactors, such as metal ions, to attain their activity. Since the cofactors in such cases often can interact with their corresponding unfolded polypeptides in vitro, it is important to unravel how cofactors modulate protein folding. In this review, I will discuss the role of cofactors in folding of the blue-copper protein Pseudomonas aeruginosa azurin. In the case of both copper (Cu(II) and Cu(I)) and zinc (Zn(II)), the metal can bind to unfolded azurin. The residues involved in copper (Cu(II) and Cu(I)) coordination in the unfolded state have been identified as Cys112, His117, and Met121. The affinities of Cu(II), Cu(I), and Zn(II) are all higher for the folded than for the unfolded azurin polypeptide, resulting in metal stabilization of the native state as compared to the stability of apo-azurin. Cu(II), Zn(II), and several apo forms of azurin all fold in two-state kinetic reactions with roughly identical polypeptide-folding speeds. This suggests that the native-state beta-barrel topology, not cofactor interactions or thermodynamic stability, determines azurin's folding barrier. Nonetheless, copper binds much more rapidly (i.e., 4 orders of magnitude) to unfolded azurin than to folded azurin. Therefore, the fastest route to functional azurin is through copper binding before polypeptide folding; this sequence of events may be the relevant biological pathway.  相似文献   

9.
Nickel(II) and cobalt(II) derivatives of the blue copper protein Pseudomonas aeruginosa azurin have been studied by resonance Raman (RR) spectroscopy at liquid-nitrogen temperatures. Vibrational assignments for the observed RR bands of Ni(II)-azurin have been made through a study of (62)Ni-substituted azurin. A comparison of Ni(II)-azurin RR spectra with those of the wild type (Cu-containing) protein showed Ni(II)-S(Cys) stretching vibrations, nu(Ni-S)(Cys), at substantially lower frequencies (approximately 360 versus approximately 400 cm(-1), respectively), indicating that the Ni(II)-S(Cys) bond is much weaker than the corresponding Cu(II)-S(Cys) bond. Resonance enhanced predominantly nu(Ni-N)(His) modes indicate that the metal-N(His) bond distances in the Ni(II) derivative are the same as those in native azurin. The vibrational data also confirm a tetrahedral disposition of ligands about the metal in Ni(II)-azurin found in the protein crystallographic structures. As expected, excitation profile measurements on Ni(II)-azurin show that the nu(Ni-S)(Cys) assignable modes give maxima at the 440-nm absorption band, which confirms a S(Cys) --> Ni(II) charge-transfer origin of the 440-nm electronic transition in Ni(II)-substituted azurin.  相似文献   

10.
Abstract— Phosphorescence measurements of rhodopsin in bovine rod disk membranes were made to study changes in protein conformation on bleaching by probing the environment of tryptophan and tyrosine residues of the protein. Bleaching decreased the tyrosine phosphorescence by about 25% and significantly affected the amplitude of triplet decay when rhodopsin was excited at 280 nm, where both tyrosine and tryptophan absorb. Computer analysis using one or two exponential model functions showed the presence of two components in the decay curve at 410 nm—one with a lifetime of 2.2 s, the other with a lifetime of 4.8 s>—which are typical of tyrosine and tryptophan respectively. When the rod outer segment sample was bleached, there was a significant decrease in the amplitude of the tyrosine component. However, the lifetime values of the two components did not change. Analyses of the fluorescence spectra of dark and bleached membranes at different excitation wavelengths and the phosphorescence change on bleaching suggest energy transfer between tyrosine and tryptophan singlet states, which may result from a conformational change of the opsin moiety on bleaching.  相似文献   

11.
Abstract— The phosphorescence of 1-bromonaphthalene and 1-chloronaphthalene is readily observable in nitrogen purged aqueous solutions containing ß-cyclodextrin. Addition of acetonitrile increases both the phosphorescence intensity and lifetime. The quenching of halonaphthalene phosphorescence in aqueous solution by nitrite is substantially inhibited upon addition of ß-cyclodextrin, as a result of a guest-host complex. The rate constants for formation and dissociation of the l-bromonaphthalene/ß-cyclodextrin complex are evaluated from an analysis of the dependence of phosphorescence lifetimes on nitrite concentration.  相似文献   

12.
Anaerobic solutions of lens alpha-crystallin were subjected to near-UV (greater than 295 nm) irradiation, and the photoproducts were analyzed by fluorescence and room-temperature phosphorescence spectroscopy. The principal photoproduct was excited maximally at 340 nm, fluoresced maximally at 430 nm, and phosphoresced with an emission maximum at 510 nm. The phosphorescence intensity decay of this species was well fit by a sum of two exponentials with lifetimes of 9.2 ms (78%) and 61 ms (22%); this report is the first demonstration of a long-lived triplet state associated with a protein photolysis product. As reported previously, 3trp* is also long-lived in deoxygenated alpha-crystallin solution at room-temperature (Berger and Vanderkooi, 1989, Biochemistry 28, 5501-5508), hence both tryptophan and photoproduct triplet states are good candidates to mediate photodamage. Photolysis experiments in the presence of agents known to alter the tryptophan triplet yield provide evidence for the importance of triplet-state-mediated photodamage of lens crystallins in anaerobic solution. In 30 mM acrylamide where 3trp*, but not 1trp*, is efficiently quenched, anaerobic solutions exhibited marked resistance to protein photodamage, whereas the photoprotection in aerobic solution was minimal. In D2O, where photoionization is suppressed but triplet states are longer-lived, photodamage was accelerated in anaerobic solution but reduced in aerobic solutions. Finally, the anaerobic photodestruction rate was increased in 500 mM Cs+ solution where the triplet yield is increased by a heavy atom effect.  相似文献   

13.
Azurin is a small electron-transfer protein belonging to the cupredoxin family. The Cu atom is located within a trigonal plane coordinated by two histidines (His46 and His117) and a cysteine (Cys112) with two more distant ligands (Gly45 and Met121) providing axial interactions. A Cys112SeCys derivative has been prepared by expressed protein ligation, and detailed UV/vis, EPR and EXAFS studies at the Cu and Se K-edges have been carried out. Marked changes are observed between the EPR parameters of the Cys112SeCys and WT azurin derivatives, which include a 2-fold increase in A(||), a decrease in g-values, and a large increase in rhombicity of the g-tensor. The Cu-Se and Se-Cu bond lengths obtained from analysis of the Cu and Se K-EXAFS of the oxidized protein were found to be 2.30 and 2.31 A, respectively, 0.14 A longer than the Cu-S distance of the WT protein. Unexpectedly, the Cu-Se bond lengths were found to undergo only minor changes during reduction, suggesting a very similar structure in both redox states and extending the "rack" hypothesis to the Se-substituted protein.  相似文献   

14.
Abstract. Tryptophan phosphorescence lifetime and quantum yield are sensitive to the local environment. The phosphorescence from tryptophan analogs, however, has not been studied. We report here data on the room temperature phosphorescence of tryptophan, 4-, 5- and 6-fluoro-DL-tryptophan (4-F-trp, 5-F-trp and 6-F-trp) and 5-bromo-DL-tryptophan (5-Br-trp) embedded in glassy powders of freeze-dried sucrose. In aqueous solution, the absorption of the analogs was either blue-shifted (4-F-trp), red-shifted (5-F-trp and 5-Br-trp) or not shifted (6-F-trp) with respect to tryptophan. The phosphorescence emission spectra of all analogs were red-shifted compared to trp (442 nm) with maxima at 446 nm (5-F-trp), 451 mn (6-F-trp), 452 nm (5-Br-trp) and 469 nm (4-F-trp). The 5-F-trp and 6-F-trp analogs had emission intensities similar to tryptophan (relative quantum yields of 0.68 and 0.91, respectively, compared to tryptophan), while the intensities of the 4-F and 5-Br analogs were lower (relative quantum yields of 0.039 and 0.022, respectively). All analogs exhibited complex decay behavior requiring several exponentials for an adequate fit; the average lifetimes were all lower than that of trp (1039 ms). The average lifetimes of the fluorinated analogs (5-F, 721 ms; 6-F, 482 ms and 4-F, 35 ms) scaled approximately with the relative quantum yields while that of 5-Br (0.53 ms) was significantly lower. Analysis of the individual lifetimes suggested that the fluorinated analogs differ in their sensitivity to environmental interactions, with 5-F- and 6-F-trp quenched 1.5-2-fold and 4-F-trp about 23-fold more efficiently than tryptophan. The red-shifted 5-F-trypto-phan analog, which has been incorporated into proteins, may provide an alternative phosphorescence probe for selective phosphorescence detection of a specific protein in a complex mixture.  相似文献   

15.
The phosphorescence properties, especially the dynamic behavior of metal free and metal complexed porphyrins, have been studied in phosphate buffered saline (PBS) containing 0-3% human serum albumin (HSA). 6,7-Bisaspartyl-2,4-bis (1-hexyloxyethyl)-deutero- porphyrin (DP) and its gallium(III), zinc(II), and indium(III) complexes are used as photosensitizers. Upon irradiation, a solution of porphyrins containing more than 0.1% HSA shows phosphorescence with a lifetime longer than 1 ms. With an increase in irradiation time, phosphorescence intensities and lifetimes of porphyrins increase, depending upon their concentrations and triplet lifetimes, and approach saturated values close to those under deaerated conditions. The experimental results may be interpreted in terms of hypoxia induced by photosensitization in a local environment surrounding the sensitizer. The hypoxia is caused by the reaction between proteins and singlet molecular oxygen generated by photosensitization of porphyrins. Phosphorescence behavior of sensitizers in HSA PBS solution gives significant information for classifying photosensitizers as to their efficacy for photodynamic therapy.  相似文献   

16.
Fourier transform analysis of ramped square-wave voltammograms indicates the availability of a novel form of kinetic selectivity for surface-confined electron-transfer processes. Thus, for all the even harmonic components, quasi-reversible processes are sensitive to the surface coverage, the reversible potential, the electron-transfer rate constant (k(0')), and the electron-transfer coefficient (alpha), as well as to the amplitude (DeltaE) and frequency (f) of the square wave and dc scan rate. Additionally, it is insensitive to background capacitance current. In contrast, reversible processes and background currents are predicted to be absent from the even harmonics and only detectable in the odd harmonic components. The square-wave voltammetry of the surface-confined quasi-reversible azurin process azurin[Cu(II)] + e(-) right arrow over left arrow azurin[Cu(I)] at a paraffin-impregnated graphite electrode has been employed as a model system to test theoretical predictions. Most voltammetric characteristics of the even harmonic components obtained from the Fourier analysis are consistent with electrode kinetic values of k(0') = 90 s(-1) and alpha = 0.48, although some nonideality possibly due to kinetic dispersion also is apparent. Conditions also have been determined under which a readily generated waveform constructed from the Fourier series of sine waves produces voltammograms that are essentially indistinguishable from those predicted when an ideal square wave is employed.  相似文献   

17.
The photoinduced reaction of thioxanthone (TX) with various indolic and phenolic derivatives and amino acids like tryptophan and tyrosine has been monitored in sodium dodecyl sulfate micellar medium. Laser flash photolysis and magnetic field effect (MFE) experiments have been used to study the dynamics of the radical pairs. The quenching rate constant with different quenchers in SDS micellar solution has been measured. For indoles the electron-transfer reaction has been found to be followed by proton transfer from the donor molecule, which gives rise to the TX ketyl radical. On the other hand, the electron-transfer reaction in the case of phenols is preceded with formation of a hydrogen-bonded exciplex. The extent of the MFE and magnitude of the magnetic field corresponding to one-half of the saturation value of MFE ( B 1/2) support the fact that hyperfine mechanism plays the primary role. Quenching of MFE in the presence of gadolinium ions confirms that the radical pair is located near the micellar interface. MFE study has been further extended to protein-like bovine serum albumin in micellar solution. The results indicate loss in mobililty of radical pairs in the protein surfactant complex.  相似文献   

18.
Previous kinetic and electrochemical studies of copper complexes with macrocyclic tetrathiaethers-such as 1,4,8,11-tetrathiacyclotetradecane ([14]aneS4)-have indicated that electron transfer and the accompanying conformational change occur sequentially to give rise to a dual-pathway mechanism. Under appropriate conditions, the conformational change itself may become rate-limiting, a condition known as "gated" electron transfer. We have recently hypothesized that the controlling conformational change involves inversion of two donor atoms, which suggests that "gated" behavior should be affected by appropriate steric constraints. In the current work, two derivatives of [14]aneS4 have been synthesized in which one of the ethylene bridges has been replaced by either cis- or trans-1,2-cyclopentane. The resulting copper systems have been characterized in terms of their Cu(II/I)L potentials, the stabilities of their oxidized and reduced complexes, and their crystal structures. The electron self-exchange rate constants have been determined both by NMR line-broadening and by kinetic measurements of their rates of reduction and oxidation with six or seven counter reagents. All studies have been carried out at 25 degrees C, mu = 0.10 M (NaClO4 and/or Cu(ClO4)2), in aqueous solution. Both Cu(II/I) systems show evidence of a dual-pathway mechanism, and the electron self-exchange rate constants representative of both mechanistic pathways have been determined. The first-order rate constant for gated behavior has also been resolved for the Cu(I)(trans-cyclopentane-[14]aneS4) complex, but only a limiting value can be established for the corresponding cis-cyclopentane system. The rate constants for both systems investigated in this work are compared to values previously determined for the Cu(II/I) systems with the parent [14]aneS4 macrocycle and its derivatives involving phenylene and cis- or trans-cyclohexane substituents. The results are discussed in terms of the influence of the fused rings on the probable conformational changes accompanying the electron-transfer process.  相似文献   

19.
Abstract Recombinant human erythropoietin is a 4-helix bundle, glycosylated cytokine containing three tryptophan residues at positions 51, 64 and 88 whose phosphorescence emission may represent a sensitive probe of the structure at multiple sites near or at the protein surface. This report characterizes the phosphorescence properties (spectral energy, thermal spectral relaxation and phosphorescence lifetime), from low temperature glasses to ambient temperature, of the native protein plus that of three single point mutation analogs where each Trp was replaced by Phe. The structural information inferred from the phosphorescence parameters was essentially in good agreement with the structure of the Escherichia coli-produced nonglycosylated protein determined by nuclear magnetic resonance (Cheetham et al., Nat Struct Biol [1998] 5:861). The results showed that the fluorescence and phosphorescence spectra of the native protein were entirely due to independent contributions of Trp51 and Trp64 and that Trp88 was quenched under all conditions. The phosphorescence emissions of Trp51 and Trp64 were differentiated by their unique spectra at 77 K with Trp64 exhibiting an unusually blueshifted spectrum likely due to the attractive interaction of Arg110 and Lys116 with the ground state dipole of Trp64. In the native protein the room temperature phosphorescence lifetime of Trp64 was relatively short with a time of 1.62 ms whereas the lifetime of Trp51 was five-fold longer. Characterization of the single point mutation analogs showed that each lifetime was composed of multiple components revealing the presence of multiple stable conformations of the protein at these surface sites.  相似文献   

20.
Electron transfer proteins, such as azurin (a blue copper protein), are promising candidates for the implementation of biomolecular nanoelectronic devices. To understand the details of electron transfer in redox active azurin molecules, we performed plane‐wave pseudo‐potential density functional theory (DFT) calculations of the protein active site in the two possible oxidation states Cu(I) and Cu(II). The ab initio results are used to discuss how the electronic spectrum and wavefunctions may mediate the shuttling of electrons through the copper ion. We find that the Cu‐ligand hybridization is very similar in the two charge states of the metal center, but the energy spectrum changes substantially. This result might indicate important effects of electronic correlations in the redox activity and consequent electron transfer through the Cu site. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2005  相似文献   

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