MP2 and DFT calculations on circulenes and an attempt to prepare the second lowest benzolog, [4]circulene

MP2 and DFT calculations have been carried out for [n]circulenes for n=3 to 20 in order to predict the strain energy and topology of these cyclically condensed aromatic systems. To synthesise [4]circulene (2), 1,5,7,8-tetrakis(bromomethyl)biphenylene (14) was prepared from the corresponding tetramethyl derivative (8) and subjected to various dehalogenation reactions; all attempts to obtain [2.2]biphenylenophane (7) as a precursor for 2 by this route failed. Treatment of 14 with sodium sulfide furnished the thiaphanes 16 and 17, thermal and photochemical desulfurization of which also failed to provide 7. In a second approach [2.2]paracyclophane was converted to the pseudo-geminal dithiol 23, which was subsequently bridged to the thiaphanes 22 and 24. On flash vacuum pyrolysis at 800 degrees C these were converted exclusively into phenanthrene (30). An approach to dehydrochlorinate the commercial product PARYLENE C to the tetrahydro[4]circulene 7 led only to polymerisation. The X-ray structures of the intermediates 8, 14, 17, 23, 24, 26, and 35 are reported.     

Synthesis and Characterization of Geminally Dialkylsubstituted Tetraindanotetraoxa[8]circulenes

A synthetic methodology for the synthesis of 2,2‐dialkyl‐4,7‐dimethoxy‐2,3‐dihydro‐1H‐inden‐1‐ones from 4,7‐dimethoxy‐2,3‐dihydro‐1H‐inden‐1‐one has been developed, and some of these compounds were converted into the corresponding geminally dialkylsubstituted tetraindanotetraoxa[8]circulenes with the expectation of obtaining discotic liquid crystalline materials.     

FT-Raman and FTIR spectra, assignments and ab initio calculations of 2-aminobenzyl alcohol

The Fourier transform Raman and Fourier transform infrared spectra of 2-aminobenzyl alcohol (2ABA) were recorded in the solid phase. Geometry optimizations were done with out any constraint and harmonic vibrational wave numbers and several thermodynamic parameters were calculated for the minimum energy conformer at ab initio and DFT levels invoking 6-31g** and 6-311+g(2d, p) basis sets and the results were compared with the experimental values. With the help of three specific scaling procedures, the observed vibrational wavenumbers in FTIR and FT-Raman spectra were analyzed and assigned to different normal modes of the molecule. Most of the modes have wavenumbers in the expected range and the error obtained was in general very low. The appropriate theoretical spectrograms for the Raman and IR spectra of 2ABA were also constructed.     

FTIR and FT-Raman spectra, assignments, ab initio HF and DFT analysis of xanthine

The molecular vibrations of xanthine were investigated in polycrystalline sample, at room temperature by Fourier transform infrared (FTIR) and FT-Raman spectroscopies. The spectra of the molecule have been recorded in the regions 4000-50 cm(-1) and 3500-100 cm(-1), respectively. Theoretical information on the optimized geometry, harmonic vibrational frequencies, infrared and Raman intensities were obtained by means of ab initio Hartree-Fock (HF) and density functional theory (DFT) gradient calculations with complete relaxation in the potential energy surface using 6-311++G(d,p) basis set. The vibrational frequencies which were determined experimentally from the spectral data are compared with those obtained theoretically from ab initio and DFT calculations. A close agreement was achieved between the observed and calculated frequencies by refinement of the scale factors. The infrared and Raman spectra were also predicted from the calculated intensities. Thermodynamic properties like entropy, heat capacity, zero point energy have been calculated for the molecule. Unambiguous vibrational assignment of all the fundamentals was made using the potential energy distribution (PED).     

FTIR and FT-Raman spectra, molecular geometry, vibrational assignments, first-order hyperpolarizability, ab initio and DFT calculations for 3,4-dimethoxybenzonitrile

Quantum chemical calculations of energies, geometrical structure and vibrational wave numbers of 3,4-dimethoxybenzonitrile (DMBN) were carried out by the ab initio Hartree-Fock (HF) and density functional theory (DFT) with complete relaxation in the potential energy surface using 6-311++G(d,p) basis set. The computed values of frequencies are scaled using a suitable scale factor to yield good coherence with the observed values. Making use of the recorded data, the complete vibrational assignments are made and analysis of the observed fundamental bands of molecule is carried out. The geometries and normal modes of vibrations obtained from ab initio HF and B3LYP calculations are in good agreement with the experimentally observed data. The electric dipole moment (μ) and the first hyperpolarizability (β) values of the investigated molecule have been computed using ab initio quantum mechanical calculations. The calculated HOMO and LUMO energies show that charge transfer occur within the molecule. The theoretical FTIR and FT-Raman spectra for the title molecule have been constructed.     

DFT calculations on [6.8]cyclacenes and CpCo-capped [4.8]cyclacenes

Two different types of cyclacenes, utilizing eight-membered and six-/four-membered rings as building blocks ([6.8](n) and CpCo-capped [4.8](n)cyclacenes), have been theoretically investigated with respect to their geometries, relative energies, and magnetic properties (aromaticity).     

Vibrational spectra and fundamental structural assignments from HF and DFT calculations of methyl benzoate

The Fourier transform Raman and Fourier transform infrared spectra of methyl benzoate (MB) were recorded in the liquid phase. The equilibrium geometry, harmonic vibrational frequencies, infrared intensities and Raman scattering activities, depolarization ratios, reduced masses were calculated by Hartree-Fock (HF) and density functional B3LYP method with the 6-311+G(d,p) basis set. The scaled theoretical wavenumbers showed very good agreement with the experimental values. The thermodynamic functions of the title compound were also performed at HF/6-311+G(d,p) and B3LYP/6-311+G(d,p) levels of theory. A detailed interpretations of the infrared and Raman spectra of methyl benzoate is reported. The theoretical spectrograms for FT-IR spectra of the title molecule have been constructed.     

FTIR and FTRaman spectra,assignments, ab initio HF and DFT analysis of 4-nitrotoluene

In this work, the experimental and theoretical study on molecular structure and vibrational spectra of 4-nitrotoluene are studied. The FTIR and FTRaman experimental spectra of the molecule have been recorded in the range of 4000–100 cm^?1. Making use of the recorded data, the complete vibrational assignments are made and analysis of the observed fundamental bands of molecule is carried out. The experimental determinations of vibrational frequencies are compared with those obtained theoretically from ab initio HF and DFT quantum mechanical calculations using HF/6-31G (d, p), B3LYP/6-31++G* (d, p) and B3LYP/6-311++G* (d, p) methods. The differences between the observed and scaled wave number values of most of the fundamentals are very small in B3LYP than HF. The geometries and normal modes of vibrations obtained from ab initio HF and B3LYP calculations are in good agreement with the experimentally observed data. Comparison of the simulated spectra provides important information about the ability of the computational method (B3LYP) to describe the vibrational modes. The vibrations of NO₂ and CH₃ groups coupled with skeletal vibrations are also investigated.     

Vibrational spectra and structure of methyl-derivatives of imidazo[4,5-c]pyridine based on DFT quantum chemical calculations and XRD studies

The molecular structures, vibrational energy levels and potential energy distribution of 4-methyl-imidazo[4,5-c]pyridine (4MIPc) and 7-methyl-imidazo[4,5-c]pyridine (7MIPc) are derived from the quantum chemical calculations and compared to the experimental results obtained from the X-ray diffraction (XRD), IR and Raman studies. The B3LYP/6-311G(2d,2p) quantum model and PED contributions have been applied for the assignment of the vibrational modes. 4MIPc crystallizes in an orthorhombic structure, space group Pna2₁ and Z = 4 and 7MIPc crystallizes in a triclinic structure, space group P−1 and Z = 4. The almost planar conformation of the molecules and presence of the N–H?N hydrogen bonds formed with the pyridine and imidazole nitrogen atoms was found to be characteristic for the studied systems. The presence of hydrogen bonds is also confirmed by the results of IR studies.     

An alternative approach to the synthesis of [1,2,4]triazolo[1,5-a]pyridine-8-carbonitriles,their crystal structure,and DFT calculations

New representatives of [1,2,4]triazolo[1,5-a]pyridine-8-carbonitriles were synthesized via the condensation of β-diketones or β-dialdehydes and characterized using MS spectrometry, ¹H, ¹³C and, ¹⁹F NMR and IR spectroscopy. Crystal structures of two compounds were established using X-ray analysis and showed that title compounds are prone to the formation of planar molecules. The absence of band responsible for CN stretching vibration in trifluoromethyl-containing compounds was explained using the DFT calculations method, which also showed a significant influence of fluorines introducing on the energy gap between HOMO and LUMO.     

Simulation of IR and Raman spectra of p-hydroxyanisole and p-nitroanisole based on scaled DFT force fields and their vibrational assignments

This work deals with the vibrational spectroscopy of p-hydroxyanisole (PHA) and p-nitroanisole (PNA) by means of quantum chemical calculations. The mid and far FT-IR and FT-Raman spectra were recorded in the condensed state. The fundamental vibrational frequencies and intensity of vibrational bands were evaluated using density functional theory (DFT) with the standard B3LYP/6-31G* method and basis set combination and were scaled using various scale factors which yield a good agreement between observed and calculated frequencies. The vibrational spectra were interpreted with the aid of normal coordinate analysis based on scaled density functional force field. The results of the calculations were applied to simulate infrared and Raman spectra of the title compounds, which showed excellent agreement with the observed spectra.     

Raman and infrared spectra, ab initio and DFT calculations, and vibrational assignments for 2,3-cyclopentenopyridine

The structural properties of 2,3-cyclopentenopyridine (pyrindan) have been investigated using several spectroscopic and computational techniques. The Raman and infrared spectra of the molecule have been recorded and a full vibrational assignment was proposed on the basis of experimental and theoretical results. The vapor-phase Raman spectrum was successfully obtained at 260 degrees C without sample decomposition. Density functional theory (DFT) and M?ller-Plesset (MP2) calculations predict that the presence of the nitrogen atom in the six-membered ring has almost no effect on the barrier to inversion (587 cm(-1)) and puckering frequency (139 cm(-1)) as compared to the values previously determined (488 cm(-1) and 143 cm(-1)) for the indan molecule.     

Facile Synthesis of Azahelicenes and Diaza[8]circulenes through the Intramolecular Scholl Reaction

Carbazole-based aza[7]helicenes and hetero[9]helicenes were successfully obtained via the intramolecular Scholl reaction of 3,6-bis(biphenyl-2-yl)carbazole congeners, while the reaction of 3,6-bis(naphthylphenyl)-appended carbazole gave a triple helicene via an unexpected simultaneous double aryl rearrangement. DFT calculations suggested that the rearrangement proceeded via an arenium cation intermediate. In addition, the reaction of methoxy-appended substrate gave an azahepta[8]circulene via the concurrent C−C bond formation. These helical dyes showed circularly polarized luminescence. The azahepta[8]circulene was further transformed into deeply saddle-distorted dibenzodiaza[8]circulenes as the first example of its solution-based synthesis and unambiguous structural determination.     

DFT calculations,microsynthesis and characterization of isopropyl methylphosphonoselenofluoridate [sarin-Se]

Abstract

Isopropyl methylphosphonoselenofluoridate (sarin-Se) was synthesized in order to determine its analytical data and to compare them as well as its reactivity parameters with those of sarin. After synthesis, sarin-Se was characterized using ¹ Mesilaakso, M. In: Mesilaakso, M. (Ed.), Introduction, Chemical Weapons Convention Analysis, Sample Collection, Preparation and Analytical Methods, Wiley, Chichester, 2005.[Crossref] , [Google Scholar]H, ¹³ Rayman, M. P.; Infante, H. G.; Sargent, M. Food-Chain Selenium and Human Health: spotlight on Speciation. Br. J. Nutr. 2008, 100, 238–253.[Crossref], [PubMed], [Web of Science ®] , [Google Scholar]?C and ³¹P NMR spectroscopy and high resolution mass spectrometry (HRMS). ¹ Mesilaakso, M. In: Mesilaakso, M. (Ed.), Introduction, Chemical Weapons Convention Analysis, Sample Collection, Preparation and Analytical Methods, Wiley, Chichester, 2005.[Crossref] , [Google Scholar]H and ¹³ Rayman, M. P.; Infante, H. G.; Sargent, M. Food-Chain Selenium and Human Health: spotlight on Speciation. Br. J. Nutr. 2008, 100, 238–253.[Crossref], [PubMed], [Web of Science ®] , [Google Scholar]?C NMR chemical shifts were also calculated using density functional theory (DFT) and compared with experimental data, showing a close agreement. Electrophilicity indices of sarin and sarin-Se were calculated at B3LYP/6-31++G (2d, 2p) level of theory. HOMO-LUMO analysis provides a basis to explain electrophilic nature of sarin-Se and sarin, which are almost similar. Based on calculated data, ³¹P NMR chemical shift and the reactivity of sarin-Se towards some enzymes such as acetylcholinesterase and albumin were explained.     

Trapping intermediates in an [8 + 2] cycloaddition reaction with the help of DFT calculations

DFT calculations predict that the [8 + 2] cycloaddition reaction between ketenes and 8-azaheptafulvenes occurs stepwise through antiaromatic zwitterionic intermediates. With adequate modifications of both the electronic properties of the ketene and the reaction conditions, these elusive intermediates have been successfully trapped and fully characterized (X-ray), thus confirming the predicted stepwise nature of the transformation.     

FT-IR, FT-Raman, NMR and UV-vis spectra, vibrational assignments and DFT calculations of 4-butyl benzoic acid

The solid phase FTIR and FT-Raman spectra of 4-butyl benzoic acid (4-BBA) have been recorded in the regions 400-4000 and 50-4000cm(-1), respectively. The spectra were interpreted in terms of fundamentals modes, combination and overtone bands. The structure of the molecule was optimized and the structural characteristics were determined by density functional theory (DFT) using B3LYP method with 6-311++G(d,p) as basis set. The vibrational frequencies were calculated for monomer and dimer by DFT method and were compared with the experimental frequencies, which yield good agreement between observed and calculated frequencies. The infrared and Raman spectra were also predicted from the calculated intensities. (13)C and (1)H NMR spectra were recorded and (13)C and (1)H nuclear magnetic resonance chemical shifts of the molecule were calculated using the gauge independent atomic orbital (GIAO) method. UV-visible spectrum of the compound was recorded in the region 200-400nm and the electronic properties HOMO and LUMO energies were measured by time-dependent TD-DFT approach. The geometric parameters, energies, harmonic vibrational frequencies, IR intensities, Raman intensities, chemical shifts and absorption wavelengths were compared with the available experimental data of the molecule.     

Quadruply BN-Fused Tetrathia[8]circulenes with Flexible Frameworks: Synthesis,Structures and Properties

Quadruply BN-fused tetrathia[8]circulenes were synthesized through four-fold electrophilic borylation. The single-crystal X-ray diffraction analysis revealed that the BN-fused tetrathia[8]circulene with peripheral phenyl groups exhibits crystal polymorphism, in which the circulene core adopts both planar and saddle conformations in the solid state. The experimental and theoretical studies revealed that the weaker aromaticity of azaborine compared with benzene renders the flexibility of the BN-fused tetrathia[8]circulenes.     

Revised vibrational band assignments for the experimental IR and Raman spectra of 2,3,4-trifluorobenzonitrile based on ab initio, DFT and normal coordinate calculations

In the present study, a systematic vibrational spectroscopic investigation for the experimental IR and Raman spectra of 2,3,4-trifluorobenzonitrile (TFB), aided by electronic structure calculations has been carried out. The electronic structure calculations – ab initio (RHF) and hybrid density functional methods (B3LYP) – have been performed with 6-31G* basis set. Molecular equilibrium geometries, electronic energies, IR intensities, harmonic vibrational frequencies, depolarization ratios and Raman activities have been computed. The results of the calculations have been used to simulate IR and Raman spectra for TFB that showed excellent agreement with the observed spectra. Potential energy distribution (PED) and normal mode analysis have also been performed. The assignments proposed based on the experimental IR and Raman spectra have been reviewed. A complete assignment of the observed spectra has been proposed.