Synthesis and 13C NMR spectra of cis- and trans-{2-(haloaryl)-2-[(1H-imidazol)-1-yl]methyl]}-1,3-dioxolane-4-methanols

Syntheses and ¹³C nmr spectra of a number of cis and trans 2-(haloaryl)-2-[(1H-imidazol-1-yl)rnethyl]-4-(hydroxymethyl)-1,3-dioxolanes are described. The haloaryl groups are 2,4-dichloro, 2,4-difluoro-, 4-chloro-and 4-bromophenyl. In these series, some of the cis compounds become available through crystalline bromo benzoates 5 . Separations of some trans isomers are achieved through fractional crystallizations of imidazolyl benzoate nitrates 6 . Stereochemical assignments are based primarily on one major ¹³C chemical shift difference, namely that of C-4 of the 1,3-dioxolane ring, the chemical shift of the trans isomers being 1.0-2.5 ppm downfield from that of the cis isomers.     

Conformational isomerism of 2-carboazetidines

A number of 1-alkyl-2-carboazetidines have been prepared from the reaction of primary amines with α,γ-dibromocarbonyl compounds. Several of these new azetidines exhibit doublet carbonyl stretching absorptions in their infrared spectra. A possible explanation of this phenomenon is offered in terms of three rotational conformers which represent various degrees of dipole-dipole and steric interactions. The cis and trans forms of 1-t-butyl-2-carbomethoxy-4-methylazetidine have been obtained from the reaction of t-butylamine with methyl α,γ-dibromovalerate. A detailed examination indicates that the ir and nmr spectra of these epimers are in agreement with the foregoing conformational postulates.     

Stereochemical studies. Part 67. Saturated heterocycles. Part 52. The mass spectra of some condensed skeleton 1,3-oxazin-4-one derivatives

The mass spectrometric behaviour of twenty saturated heterocyclic compounds with a 1,3-oxazin-4-one moiety fused with cis or trans anellation to a cycloalkane ring (C₅-C₈) was studied. The roles of the C-2 and N-3 substituent(s) were found to be characteristic, while the size of the cycloalkane ring seemed to be unimportant. Some fragmentation processes involving breakdown of the oxazinone ring of the cis or trans isomers displayed significant stereoselectivity. A striking new decomposition process involving significant chlorine elimination from the molecular ion of some 2-p-chlorophenyl derivatives was observed and was studied in some detail.     

Solid-state structures of cis- and trans-1-cyclohexyl-2-phenyl-3-(p-toluyl)aziridines

Solid-state structures have been determined for cis- and trans-1-cyclohexyl-2-phenyl-3-(p-toluyl)aziridines using single-crystal X-ray diffraction techniques. The cis isomer crystallizes in the centrosymmetric monoclinic space group P2₁/c (No. 14), with a = 18.669(3)Å, b = 5.709(1)Å, c = 17.412(2)Å, β = 96.29(1)° and Z = 4; the trans isomer crystallizes in the noncentrosymmetric orthorhombic space group Pna2₁ (No. 33), with a = 17.089(2)Å, b = 18.729(3)Å, c = 5.749(1)Å and Z = 4. Full-matrix least-squares refinement of the structural parameters led to the following final agreement factors: R₁ (unweighted, based on F) = 0.040 and R₂ (weighted, based on F) = 0.054 for the 2592 independent reflections of the cis isomer having 2θ_MoK¯α <55° and I>3σ₁, and R₁ = 0.033 and R₂ = 0.031 for the 1504 independent reflections of the trans isomer having 2θ_MoK¯α <55° and I>3σ₁. The statistically significant differences that exist between the two isomers for two bond lengths and ten bond angles (p < 0.05) appear to be the direct result of the p-toluyl group orientation with respect to the cyclohexyl and phenyl substituents. In the cis isomer it is anti with respect to the N-cyclohexyl group and cis with respect to the phenyl group, whereas in the trans isomer it is syn with respect to the N-cyclohexyl and trans with respect to the phenyl group. Three-ring to carbonyl hyperconjugation is correlated with stereoelectronic interactions in the trans isomer. Bonding, determined by X-ray and nmr studies, is discussed for the three-membered aziridine ring proper; while bonding, determined by X-ray studies, is discussed for substituents of the aziridine ring. These aziridinyl ketone compounds are of importance as potential mammalian DNA alkylating anti-tumor agents in solid-state solid-state systems. To date only a trans isomer has demonstrated this biological activity in tumor-bearing rats.     

Chemical and nuclear magnetic resonance studies of 3,3-diphenyltetrahydrofuran derivatives

Pyrolytic cyclization of a- and β-methadol methiodides afforded cis and trans isomers of 2-ethyl-3,3-diphenyl-5-methyltetrahydrofuran, respectively. Catalytic hydrogenation of 2-ethyli-dene-3,3-diphenyl-5-methyltetrahydrofuran yielded the cis and trans isomers in a 2:1 ratio. The nmr spectra of these and structurally related compounds have been analyzed in terms of a half-chair conformation for 2-ethyl-5-methyl, 2-ethyl, and 5-methyl derivatives. An envelope conformation has been suggested for the compounds containing a double bond at C-2.     

12H-dibenzo[d,g][1,3,2]dioxaphosphocins: Synthesis,structures and “through-space” spin-spin coupling in their NMR spectra

A series of 12H-dibenzo[d,g][1,3,2]dioxaphosphocins has been prepared by the reactions of bisphenols with either ethyl phosphorodichloridate or phosphorus pentasulfide. The structures of a pair of cis and trans isomers in this series were elucidated by X-ray crystallography. Both isomers adopt the boat-chair conformation in the solid state with the bulky group at C-12 in the pseudo-equatorial position. Some flattening of the heterocyclic ring due to the pseudo-axial ethoxy group was observed in the cis isomer. A novel transannular cyclisation reaction was observed in the mass spectra of the cis isomers and this has allowed us to assign the configurations of all the isomers in the series. The pmr spectra of the compounds have been explained in terms of the rigid boat-chair conformation; however, as bulky groups were introduced at C-12, signs of mobility were observed for the cis isomers and an equilibrium was established with mobile boat forms. A stereospecific long-range coupling between P and the proton at C-12 could be transmitted “through space” by the antiperiplanar lone-pair electrons on the ring oxygen atoms.     

Benzo- and indoloquinolizine derivatives. VI—configuration and conformation of 4b,5,6,7,8,8a,10,11,16,16b-decahydrodibenz[f,h]indolo[2,3-a]quinolizine diastereoisomers. A 270 MHz 1H NMR study

The synthesis of a D/E cis isomer of the title compound is described. In an attempt to obtain the other D/E cis isomer, epimerisation reactions were studied. The configuration and conformation of the isomers are determined on the basis of their ¹H NMR spectra. The shift of the 16b proton on N-9 protonation indicates the quinolizidine conformation. At 270 MHz, the ABCD system of the C-10 and C-11 methylenes can be analysed. The ²J(C-10H₂), together with the multiplicity of H-8a, allows an unequivocal assignment of a cis-anti-cis structure to the only D/E cis isomer obtained.     

The stereochemistry of 2,4-disubstituted γ-butyrolactones and 2,4,6-trisubstituted-5,6-dihydro-4H-1, 3-oxazines

2,4-Disubstituted butyrolactones and 2,4,6-trisubstituted-5,6 dihydro-4H-1,3-oxazines show similar features in their ¹H and ¹³C- NMR spectra. Two geminal ring hydrogens of cis isomers give rise to a complex ABXY spectra when the substituent is alkyl or aryl. In spectra of trans isomers these patterns are degenerated. When R is OMe(in 4) or OCOMe (in 6) the difference in chemical shifts of geminal protons and vicinal coupling constants cannot be used for diagnosis. In ¹³C spectra ring carbons C-2 and C-3 in lactones and C-4 and C-5 in oxazine of trans isomers show a small but consistent shift to higher fields.     

STEREOCHEMICAL PROPERTIES OF THE 1-CHLORO-1- PHENYL-2,5-DIMETHYL-2-PHOSPHOLENIUM ION AND DERIVED OXIDE AND PHOSPHINE

Abstract

The cycloaddition of phenylphosphonous dichloride and trans, trans-2,4-hexadiene, or the addition of chlorine to trans-1-phenyl-cis-2,5-dimethyl-3-phospholene, gave 1-chloro-1-phenyl-2,5-dimethyl-2-phospholenium chloride. This compound shows no evidence in its ³¹P and ¹H nmr spectra for the existence of cis, trans isomers, yet on hydrolysis or dehalogenation with magnesium the resulting oxide and phosphine, respectively, are seen to be isomer mixtures. This phenomenon is explained by a rapid equilibration of the cis, trans form of the I-chloro ion through a pentacovalent species. Structures of the oxides and phosphines were assigned by ¹H and ¹³C nmr relations. The 1-phenyl-cis-2,5-dimethyl-3-phospholenium ion and related compounds were also characterized.     

Ring opening of pyridines: the pseudo‐cis and pseudo‐trans isomers of tetra‐n‐butylammonium 4‐nitro‐5‐oxo‐2‐pentenenitrilate

The reaction of 2‐chloro‐5‐nitropyridine with two equivalents of base produces the title carbanion as an intermediate in a ring‐opening/ring‐closing reaction. The crystal structures of the tetra‐n‐butylammonium salts of the intermediates, C₁₆H₃₆N⁺·C₅H₃N₂O₃⁻, revealed that pseudo‐cis and pseudo‐trans isomers are possible. One crystal structure displayed a mixture of the two isomers with approximately 90% pseudo‐cis geometry and confirms the structure predicted by the S_N(ANRORC) mechanism. The pseudo‐cis intermediate undergoes a slow isomerization over a period of months to the pseudo‐trans isomer, which does not have the appropriate geometry for the subsequent ring‐closing reaction. The structure of the pure pseudo‐trans isomer is also reported. In both isomers, the negative charge is highly delocalized, but relatively small differences in C—C bond distances indicate a system of conjugated double bonds with the nitro group bearing the negative charge. The packing of the two unit cells is very similar and largely determined by the interactions between the planar carbanion and the bulky tetrahedral cation.     

Configurationally and conformationally homogeneous cyclicN-aryl sulfimides. II.13C-and1H NMR spectra

The configuration and (in case of mobile ring systems) the preferred conformation in a series of thiane- and ofcis-andtrans-1-thiadecalin-1-N-4-chlorophenyl imides were assigned by means of¹³C- and¹H nmr spectroscopy.¹H nmr criteria known to be valid for determination of the stereochemistry of cyclic sulfoxides may be applied (with limitations) to cyclicN-aryl sulfimides, if both isomers (S–N bond equatorial and axial, respectively) are known. The assignments are easier, and unambiguous for single isomers, by comparison of¹³C nmr chemical shifts of ring carbon atoms of sulfimides and sulfides. The influence of equatorially and axially oriented sulfimide groups on the chemical shifts of neighbouring protons, and on the carbon atoms of the heterocyclic rings are discussed in detail.

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Konfigurativ und konformationell einheitliche cyclische N-Aryl-sulfimide. II.¹³C- und¹H-NMR-Spektroskopie

Zusammenfassung Die Konfiguration und (bei beweglichen Ringsystemen) die bevorzugte Konformation einer Reihe von Thian- und voncis- undtrans-1-Thiadekalin-1-N-4-chlorophenylimiden wurde durch¹³C- und¹H-NMR-Spektroskopie bestimmt. Bekannte¹H-NMR-Kriterien zur Festlegung der Stereochemie cyclischer Sulfoxide sind (mit Einschränkungen) auch bei cyclischenN-Arylsulfimiden anwendbar, wenn beide Isomere (S–N-Bindung äquatorial bzw. axial) bekannt sind. Leichter, und auch bei Vorliegen von nur einem Isomeren eindeutig, gelingt die Zuordnung durch Vergleich der¹³C-NMR-Verschiebungen der Ringkohlenstoffatome von Sulfimiden und Sulfiden. Die Einflüsse äquatorial oder axial orientierter Sulfimidgruppen auf die chemischen Verschiebungen benachbarter Wasserstoffe und der Kohlenstoffe des Heterorings werden diskutiert.

     

Ab initio static and molecular dynamics study of 4-styrylpyridine.

We report an in‐depth theoretical study of 4‐styrylpyridine in its singlet S₀ ground state. The geometries and the relative stabilities of the trans and cis isomers were investigated within density functional theory (DFT) as well as within Hartree–Fock (HF), second‐order Møller–Plesset (MP2), and coupled cluster (CC) theories. The DFT calculations were performed using the B3LYP and PBE functionals, with basis sets of different qualities, and gave results that are very consistent with each other. The molecular structure is thus predicted to be planar at the energy minimum, which is associated with the trans conformation, and to become markedly twisted at the minimum of higher energy, which is associated with the cis conformation. The results of the calculations performed with the post‐HF methods approach those obtained with the DFT methods, provided that the level of treatment of the electronic correlation is high enough and that sufficiently flexible basis sets are used. Calculations carried out within DFT also allowed the determination of the geometry and the energy of the molecule at the biradicaloid transition state associated with the thermal cis?trans isomerization and at the transition states associated with the enantiomerization of the cis isomer and with the rotations of the pyridinyl and phenyl groups in the trans and cis isomers. Car–Parrinello molecular dynamics simulations were also performed at 50, 150, and 300 K using the PBE functional. The studies allowed us to evidence the highly flexible nature of the molecule in both conformations. In particular, the trans isomer was found to exist mainly in a nonplanar form at finite temperatures, while the rotation of the pyridinyl ring in the cis isomer was incidentally observed to take place within ≈1 ps during the simulation carried out at 150 K on this isomer.     

Synthesis and epimerization of 1-Alkyl-2-carbomethoxy-4-methyl (or phenyl)azetidines

A number of 1-alkyl-2-carbomethoxyazetidines have been prepared from the reaction of primary amines with α,γ-dibromoearbonyl compounds. A series of base catalyzed reactions performed on selected cis, trans-1-alkyl-2-carbomethoxy-4-alkyl(aryl)azetidines reveal the cis isomer to be of greater thermodynamic stability. Furthermore, base catalyzed deuterium exchange studies suggest this to be the case.     

Molecular and crystal structure of <Emphasis Type="Italic">trans</Emphasis> and <Emphasis Type="Italic">cis</Emphasis> isomers of 3-cyano-4-[2-(4-methoxyphenyl)vinyl]-6,6-dimethyl-5,6-dihydro-2H-pyran

Monocrystals of the trans and cis isomers of 3-cyano-4-[2-(4-methoxyphenyl)vinyl]-6,6-dimethyl-5,6-dihydro-2H-pyran have been obtained and an X-ray structural analysis of them has been carried out. Both compounds have a molecular structure corresponding to symmetry group C₁. The heterocyclic ring is in a distorted envelope conformation. The crystals of the trans isomer are rhombic and have a fir-tree type of packing. The crystal packing of the cis isomer is formed by pairs of molecules, each of which consists of only one enantiomer. *Dedicated to deeply respected Professor Hank van der Plas in connection with his jubilee. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 4, pp. 535-540, April, 2009.     

Mass spectra of azetidines and 2-azetidinones

The mass spectra of twenty three azetidines and seventeen 2-azetidinones are reported and discussed. The majority of spectra contain molecular ions. Fragmentation modes are largely dependent upon the substitution pattern and involve specific cleavage of the four-membered ring. Several hydrogen rearrangement reactions occur, and in some cases, cis and trans isomers may be distinguished by large differences in the relative abundances of certain fragment ions.     

Synthesis,structural and conformational study of N-β(or γ)-acyloxyalkylnortropinones

A series of N-β(γ)-acyloxyalkylnortropinones have been synthesized and studied by ¹H and ¹³C nmr spectroscopy, and the crystal structure of N-[γ-(p-chlorophenylcarbonyloxy)propyl]nortropinone 4 has been determined by X-ray diffraction. The compounds studied display in deuteriochloroform solution the same preferred conformation. The pyrrolidine and piperidone rings adopt a flattened N-8 envelope and distorted chair conformation, puckered at N-8 and flattened at C-3 respectively, with the N-substituent in axial position with respect to the piperidone ring. These results are in close agreement with that found for compound 4 in the crystalline state.     

Protonenresonanz- und Röntgenstrukturuntersuchungen an unsymmetrisch substituierten Aminoboranen. III—Substituentenabhängigkeit der Struktur

A number of unsymmetrically substituted N-methylaminoboranes, each with a phenyl ring at nitrogen and boron, were synthesized. The ratio of the cis-trans isomers has been investigated by means of ¹H NMR spectroscopy and its dependence on the size of the aromatic moieties and the second substituent on boron is discussed. The structures of the compounds were established from the position of the N-methyl signal and were based on X-ray structure determinations of (4-bromophenylmethylamino) chlorophenylborane and (4-bromo-2-methylphenylmethylamino)chloro(2-methylphenyl)borane. In the case of (methylphenylamino)chlorophenylborane, the isomer with the phenyl group in cis position is highly favoured (90%) in the thermal equilibrium. Substitution of one of the phenyl groups by a 2-methyl- or 2,6-dimethylphenyl group decreases the fraction of the cis isomer. The same occurs when the chlorine substituent at boron is replaced by bromine or the methyl group. In absolute terms, the trans isomers are energetically more stable than the cis isomers only if one of the substituents at boron is a methyl or a 2,6-dimethylphenyl group or if there is a 2-methylphenyl substituent both at the nitrogen and the boron atom. Steric hindrance and electronic repulsion are probably responsible for the observed substitution effects. In addition, these experiments show that the isomer favoured in the crystal also predominates in solution.     

13C NMR spectroscopy of [4.n.0] bicyclic compounds: Assignment of the ring junction configuration from ring junction configuration from ring junction 13C chemical shifts—application and limits

Several 6-methyl-9-carbamoyltetrahydro-4H-pyrido[1,2-α]pyrimidin-4-ones have been prepared using phosgene iminium chloride. These compounds can exist in equilibrium as the cis (3A) imine ? (3B) enamine ? trans (3C) imine. ¹H, ¹³C and ¹⁵N NMR prove that the cis- and trans-imine isomers are predominant in the equilibrium. ¹H NMR data reveal that the share of the 3B enamine form is negligible at measurable concentrations. The isomeric ratio 3A:3C is time dependent and can be monitored by measuring the CH₃? C-6 and (CH₃)₂N signals. The ¹³C NMR data show that doublets in the range 42–45 ppm for C-9 are only compatible with the imine forms 3A and 3C. The SCS values of the CH₃? C-6 and OCN(CH₃)₂ groups were calculated and used for identification of the cis and trans isomers. ¹⁵N NMR data show that the N-1 chemical shift of the imine is approximately ? 140 ppm for compound 3, whereas that of a fixed enamine is around ? 267.8. This provides additional support for the predominance of the imine tautomers in the equilibrium 3A ? 3B ? 3C. ¹⁵N data allow the stereoisomers 3A and 3C to be distinguished.     

Synthesis,separation, and resolution of cis- and trans-3-ethylproline

The synthesis, separation, and optical resolution of cis- and trans-3-ethylproline are described. Two different approaches were employed: (1) The Michael addition reaction of 2-pentenal with diethyl-N-carbobenzyloxyaminomalonate gave the intermediate 3-ethyl-5-hydroxy-N-benzyloxypyrrolidine. Hydrogenolysis of this intermediate followed by acid hydrolysis gave a mixture of cis- and trans-3-ethylproline. Separation of the isomers was accomplished by selective saponification of N-(p-toluenesulfonyl)-cis- and trans-3-ethylproline methyl esters using 0.25N methanolic sodium hydroxide. (2) The Michael condensation of diethyl acetamidomalonate with 2-pentenoic acid ethyl ether produced the intermediate 5,5-bis(ethoxycarbonyl)-4-ethylpyrrolidine. Partial saponification followed by decarboxylation afforded a mixture of cis- and trans-isomers of ethyl-3-ethylpyroglutamate. The diastereoisomers were separated using low temperature fractional crystallization. Reduction of these isomers and tosylation in situ afforded the corresponding N-(p-toluenesulfonyl)-cis- and trans-3-ethylprolinols. Chromic acid oxidation gave N-(p-toluenesulfonyl)-cis- and trans-3-ethylproline. Reaction of these tosylates with 30% hydrogen bromide in acetic acid gave cis- and trans-3-ethylproline. Both optically active isomers of D(+)-and L(-)-trans-3-ethylproline were successfully resolved using (+)-dibenzoyl-D -tartaric acid and (-)-dibenzoyl-L -tartaric acid as resolving agents. The absolute configurations of the optically active isomers were determined by circular dichroism spectroscopy.     

13C NMR shifts and conformations of substituted indans

¹³C NMR spectra of indan derivatives bearing substituents in the 1, 2, 5 and 6 positions are reported and assigned by LIS measurements and other techniques. Epimeric indanes bearing vicinal oxygen and phenyl or benzyl substituents show ring carbon shielding in the cis relative to the trans isomers, which is compared with corresponding cyclopentane shifts, and indicates the predominance of envelope conformations with pseudoaxial oxygen substituents for the cis isomers. Acetylation shifts show consistently larger shielding at C-β for the trans compounds. Introduction of oxygen at C-5 leads to asymmetric shielding effects at the ortho carbon atoms as soon as there is a substituent in the para position which can participate in mesomeric forms.