Dynamic molecular movements and aggregation structures of lipids in a liquid state

This paper discusses the molecular conformations and the liquid structures of triacylglycerols (TGs) and fatty acids in their melts. Three models for liquid state ordering have been proposed for TG melts to date: the smectic liquid crystal model, the nematic liquid crystal model, and the discotic model. To completely resolve the liquid structure of TGs, further research is required. However, some information on the molecular level has been obtained for fatty acids that are relatively simple compounds. The combination of various spectroscopic and thermodynamic measurements revealed that the hydrogen-bonded dimers of fatty acids are units of intermolecular and intramolecular movements in the liquids and in non-polar solvents. The dimers that construct the clusters resemble the smectic liquid crystal and determine the physicochemical properties of the liquid of the fatty acid. Cholesterol stabilizes the clusters, while ethanol destroys them. Self-diffusion and neutron diffraction measurements revealed that two kinds of fatty acids exist in their binary liquid mixture exist as the homodimers composed of same species.     

Analysis of anthropogenic and biogenic lipids in the aerosol of a coastal area in East Mediterranean Sea

Summary The concentrations of lipids were determined in atmospheric particle samples, collected seasonally, in an urban coastal area of the Island of Crete. Lipid compound classes, such as n-alkanes, hopanes and steranes, PAH, fatty alcohols, fatty acids and fatty acids selts, were determined by GC-FID and GC-MS analysis. The concentrations ranged between 56–215 ng/m³ for n-alkanes, 10–52 ng/m³ for PAH, 2–31 ng/m³ for fatty alcohols, 13–279 ng/m³ for fatty acids and 24–220 ng/m³ for fatty acid salts. -Oxocarboxylic acids were also determined as salts, indicating the atmospheric oxidation of unsaturated fatty acids.     

MOLECULAR AMD CRYSTAL STRUCTURES OF LIPIDS AND RELATED COMPOUNDS

Molecular-level structures of lipids and related organic long-chain compounds were investigated by means of vibrational spectroscopic and X-ray diffraction methods. Various spectroscopic techniques applicable to structural studies of lipid systems were developed. Various types of solid-state phase transformations were found in even- and odd-numbered saturated fatty acids and their molecular mechanisms were considered. Crystal structures of some modifications of a series of cis-mono-unsaturated fatty acids were determined by the three-dimensional X-ray analysis and new types of molecular conformation as well as of subcell arrangement of the cis-mono-unsaturated acyl chains were found. An order-disorder type phase transformation accompanied with a partial melting at the interface of the molecular layers was found in some modifications of cis-mono-unsaturated fatty acids. Molecular conformations and crystal structures of the polymorphs of methyl oleate and triglycerides containing an oleoyl chain at the 2-position were investigated on the basis of the spectroscopic data.     

Methods for extracting biochemical information from bacterial Raman spectra: focus on a group of structurally similar biomolecules--fatty acids

In this paper we explore the possibilities of Raman spectroscopy in order to deduce information on the fatty acid composition of bacterial cells. Therefore, representative strains of two bacterial taxa were each cultured in different conditions and in parallel analyzed by Raman spectroscopy and gaschromatographic FAME analysis. Raman spectra of pure fatty acids were recorded and used as reference spectra. The culturing conditions for each strain could be easily distinguished by the fatty acid information retrieved from bacterial Raman spectra. Chemometric techniques such as EMSC and PCA allowed to extract information about groups of fatty acids, that was consistent with the results from FAME analysis. Although the information retrieved from Raman spectroscopy is not as refined as that from FAME analysis, the presented methods could be useful to obtain basic information on the fatty acid present in bacteria when performing Raman spectroscopic analysis for fast whole cell profiling, which provides information for different types of cell components (fatty acids, amino acids, primary metabolites, etc.).     

Sampling and quantitation of lipids in aerosols from the remote marine atmosphere

A procedure is described for the determination of organic compounds in aerosols and rain from the remote marine atmosphere. Five classes of naturally occuring lipids (n-alkanes, was esters, fatty alcohols, sterols, and fatty acids) were quantified in the samples. Air samples (4000–10 000 m³) were collected on glass-fiber filters under authomatic control. Rain samples (1–5 l) were collected on an event basis. Filter and rain samples were extracted with dichloromethane and the extracts were fractionated into discrete chemical classes by adsorption chromatography with silica gel. The fractions were derivatized (if necessary) and quantified by high-resolution glass-capillary gas chromatography (HRGC) and HRGC/mass spectrometry. A second filter extraction was required for quantitation of fatty acid salts. On-column injection of the fractions provided identification and quantification of a wide range of homologs within each compound class: C₁₅–C₄₄ for n-alkanes, C₃₆–C₆₂ for was esters, and C₁₃–C₃₆ for fatty alcohols and fatty acids. Internal standards were used to quantify recoveries and concentratins. Mean recoveries relative to the internal standares were 96.5% for C₁₅–C₃₆ n-alkanes, 96.4% for C₂₀–C₃₀ n-fatty acids, 92.5% for C₁₄–C₃₀ n-fatty alcohols and 93.3% for cholesterol. The procedural blanks for the remote marine aerosol samples allow detection limits of 0.1–1.0 pg m^?3 for most compounds. These values are lower than any other method used at coastal marine, rural or suburban sampling locations.     

Infrared spectroscopy studies of the cyclic anhydride as the intermediate for the ester crosslinking of cotton cellulose by polycarboxylic acids. II. Comparison of different polycarboxylic acids

Polycarboxylic acids have been used as crosslinking agents for cotton cellulose. In our previous research, we used Fourier transform infrared (FT-IR) spectroscopy to investigate the formation of five-membered cyclic anhydride intermediates on cotton fabric by different polycarboxylic acids. In this research, we found that those polycarboxylic acids capable of forming both five- and six-membered cyclic anhydrides form only five-membered cyclic anhydrides. We compared the effectiveness of the polycarboxylic acids with different molecular structures for esterifying cellulose. Those polycarboxylic acids, which have their carboxyl groups bonded to the adjacent carbons of their molecular backbones and are capable of forming five-membered cyclic anhydrides, are more effective for esterifying cellulose than those polycarboxylic acids having their carboxyl groups bonded to the alternative carbons. The only six-membered cyclic anhydride identified is the anhydride formed on the cotton fabric treated with poly(acrylic acid). © 1996 John Wiley & Sons, Inc.     

Organic compounds in precipitation

Summary Precipitation samples collected in Hannover (Germany) mainly in 1989 (and in part also in 1988 and 1990) were analyzed for n-alkanes, fatty acids, aldehydes, phenols and polycyclic aromatic hydrocarbons. The analytical methods employed were: GC/FID for alkanes, GC/MS for fatty acids and phenols, HPLC for aldehydes and PAHs.     

Identification of triacylglycerols containing two short-chain fatty acids at sn-2 and sn-3 positions from bovine udder by fast atom bombardment tandem mass spectrometry

Several triacylglycerol (TAG) molecular species, that contain two short-chain fatty acids (C4 to C8) at the sn-2 and sn-3 positions of the glycerol backbone, were isolated from bovine udder by using solvent extraction and silica gel column chromatography. Their structures were identified by fast atom bombardment (FAB) tandem mass spectrometry (MS/MS), based on the information obtained from collision-induced dissociation (CID) spectra of sodium-adducted molecules ([M + Na](+)) of model TAG compounds which had been synthesized from glycerol and appropriate fatty acids. For each species, the relative positions of the three fatty acids on the glycerol backbone, as well as fatty acid composition and double-bond position in the fatty acyl group, were determined. A majority of sodium-adducted molecules observed in the FAB mass spectrum were mixtures of at least two components that have different fatty acid composition but the same molecular mass. In addition, all the components present in mixtures of all the species contain a long-chain fatty acid (C12 to C18) at the sn-1 position, a short-chain fatty acid (C4 to C8) at the sn-2 position, and a butyric acid uniquely at the sn-3 position.     

The structures of Langmuir-Blodgett films of fatty acids and their salts

Recent advances in several experimental techniques have enabled detailed structural information to be obtained for floating (Langmuir) monolayers and Langmuir-Blodgett films. These techniques are described briefly and their application to the study of films of fatty acids and their salts is discussed. Floating monolayers on aqueous subphases have been shown to possess a complex polymorphism with phases whose structures may be compared to those of smectic mesophases. However, only those phases that exist at high surface pressures are normally used in Langmuir-Blodgett (LB) deposition. In single LB monolayers of fatty acids and fatty acid salts the acyl chains are in the all-trans conformation with their long axes normal to the substrate. The in-plane molecular packing is hexagonal with long-range bond orientational order and short-range positional order: known as the hexatic-B structure. This structure is found irrespective of the phase of the parent floating monolayer. The structures of multilayer LB films are similar to the structures of their bulk crystals, consisting of stacked bilayer lamellae. Each lamella is formed from two monolayers of fatty acid molecules or ions arranged head to head and held together by hydrogen bonding between pairs of acids or ionic bonding through the divalent cations. With acids the acyl chains are tilted with respect to the substrate normal and have a monoclinic structure, whereas the salts with divalent cations may have the chains normal to the substrate or tilted. The in-plane structures are usually centred rectangular with the chains in the trans conformation and packed in a herringbone pattern. Multilayer films of the acids show only a single-step order-disorder transition at the melting point. This temperature tends to rise as the number of layers increases. Complex changes occur when multilayer films of the salts are heated. Disorder of the chains begins at low temperatures but the arrangement of the head groups does not alter until the melting temperature is reached. Slow heating to a temperature just below the melting temperature gives, with some salts, a radical change in phase. The lamellar structure disappears and a new phase consisting of cylindrical rods lying parallel to the substrate surface and stacked in a hexagonal pattern is formed. In each rod the cations are aligned along the central axis surrounded by the disordered acyl chains.     

Nonlinear variation of sorption parameters of n-alkane homologsl in temperature-programmed gas chromatography (tpgc) and new equation for calculation of retention indixces

It has been demonstated that the considaerable difference in temperature increments of sorption parameters of n-alkanes under isothermal conditions is the main reason for nonlinear dependence of sorption parameters on molecular mass of homolog in temperaturre programmed gas chromatography (TPGC). A new nonlinear 4th parameter equation has been given for calculation of the retention indices. Coefficients of the equation are calculated from n-alkanes. The equation allows extrapolation and interpolation calculations of retention indices under TPGC conditions with experimental precision. The results obtained; for fatty acidkl methyl esters demonstrate the advantage of ovr equation in comparison with van den Dool and Kratz's equation.     

Structures lamellaires: Syntaxie,polytypie et non-stoechiométrie

The paper recalls elementary principles useful for the understanding of some types of nonstoichiometry in the solid state. The structures of layered compounds are mostly characterized by the existence of layered “molecular” entities exhibiting a simple type of bonding; in between are inserted, depending on the case, cations, anions, structural frameworks, or molecules. The layers have a quaternary or a ternary symmetry; in the last case the structures can be polytypic. The phenomenon of syntaxy occurs between polymorphs or between species with different chemical compositions but with structural affinities (identical atomic planes). In some cases an ordered syntaxy between structural blocks yields the chemical compositions of the multiple phases observed for some nonstoichiometric systems, for instance rare earth ones. Ordered syntaxy and polytypism, which can occur simultaneously, give a regular repetition of structural or chemical elements over very long crystalline distances. Those phenomena of order in solids, as yet unexplained, recall ordering phenomena observed in the scope of biological chemistry.     

Charge-remote fragmentation during FAB-CAD-B/E linked-scan mass spectrometry of aminoethyl-triphenylphosphonium derivatives of fatty acids

The carboxyl group of fatty acids is derivatized by aminoethyl triphenylphosphonium (AETPP) bromide. Fast atom bombardment (FAB) collision-activated dissociation (CAD) B/E linked-scan mass spectrometry of these fixed-charge derivatives shows typical charge-remote fragmentation (CRF). Locations of various structural modifications in fatty acids can be recognized easily from CAD spectra of the AETPP derivatives. Because the triphenylphosphonium group localizes positive charge in the molecule, and because a key requirement for CRF is a tightly localized charge site, these preionized molecules fragment under FAB-CAD conditions more effectively than other derivatives that involve ionic bonding with metal cations or protonation of basic sites. Thus, CAD of AETPP derivatives is likely to produce more structurally informative spectra and provide an opportunity to gain additional under-standing of the CRF process. The most profound difference between the AETPP derivatives and other cations in positive mode FAB-CAD-B/E-MS is reflected in the substantial improvement of detection limits for the AETPP derivatives over those for the metal cation adducts. For several fatty acids (C₁₀-C₂₂) tested, the detectability can be enhanced by one to two orders of magnitude when the analysis is performed on the AETPP derivative. In addition, for the analysis of fatty acid mixtures, the FAB mass spectrum of AETPP derivatives produces a relative intensity of the molecular ion peak for each component of the mixture that more closely represents its mole fraction than does that of metal ion adducts.     

The Intestinal Fatty Acid-Enteroendocrine Interplay,Emerging Roles for Olfactory Signaling and Serotonin Conjugates

Intestinal enteroendocrine cells (EECs) respond to fatty acids from dietary and microbial origin by releasing neurotransmitters and hormones with various paracrine and endocrine functions. Much has become known about the underlying signaling mechanisms, including the involvement of G-protein coupled receptors (GPCRs), like free fatty acids receptors (FFARs). This review focusses on two more recently emerging research lines: the roles of odorant receptors (ORs), and those of fatty acid conjugates in gut. Odorant receptors belong to a large family of GPCRs with functional roles that only lately have shown to reach beyond the nasal-oral cavity. In the intestinal tract, ORs are expressed on serotonin (5-HT) and glucagon-like-peptide-1 (GLP-1) producing enterochromaffin and enteroendocrine L cells, respectively. There, they appear to function as chemosensors of microbiologically produced short-, and branched-chain fatty acids. Another mechanism of fatty acid signaling in the intestine occurs via their conjugates. Among them, conjugates of unsaturated long chain fatty acids and acetate with 5-HT, N-acyl serotonins have recently emerged as mediators with immune-modulatory effects. In this review, novel findings in mechanisms and molecular players involved in intestinal fatty acid biology are highlighted and their potential relevance for EEC-mediated signaling to the pancreas, immune system, and brain is discussed.     

Responsive self-assemblies based on fatty acids

Fatty acids are anionic surfactants under their deprotonated forms. They are surfactants with both biodegrability and low toxicity. Fatty acid molecules can self-assemble under various shapes in an aqueous solution. These self-assembled structures can respond to stimuli such as pH, CO₂ and temperature due to changes occurring at the molecular level. These specificities make them surfactants of special interest to tune the properties at a macroscopic scale. The aim of this article is to review the recent advances in the creation and in the understanding of responsive self-assemblies obtained from fatty acid molecules in an aqueous solution. The links between the microscopic, mesoscopic and macroscopic scales are described. The alkyl chain melting phenomenon triggered by temperature at the molecular level leading to thermoresponsive interfaces and foams at the macroscopic scale is highlighted.     

Hydropyrolysis as a preparative method for the compound-specific carbon isotope analysis of fatty acids

Compound-specific stable carbon isotope analysis by gas chromatography/combustion/isotope ratio mass spectrometry is an effective and risk-free means of investigating fatty acid metabolism. Straightforward analysis, however, leads to poor chromatographic resolution, while derivatization adds carbon thereby corrupting the starting stable isotopic composition. Hydropyrolysis is a new approach which defunctionalizes fatty acids to yield the corresponding n-alkanes thus retaining the carbon skeleton intact and improving chromatography, allowing the faithful measurement of carbon isotope ratios.     

Fatty Acids and Their Metal Salts: A Review of Their Infrared Spectra in Light of Their Presence in Cultural Heritage

In a cultural heritage context, fatty acids are usually found as breakdown products of lipid-containing organic remains in archaeological findings, binders in aged oil paintings, and additives in modern art-related materials. They may further interact with the ionic environment transforming into metal soaps, a process that has been recognized as a threat in aged paintings but has received less attention in archaeological objects. The investigation of the above related categories of materials with infrared spectroscopy can provide an overall picture of the organic components’ identity and demonstrate their condition and prehistory. The capability of investigating and distinguishing fatty acids and their metal soaps through their rich infrared features, such as the acidic carbonyl, the carboxylate shifts, the variable splits of alkyl chain stretching, bending, twisting, wagging, and rocking vibrations, as well as the hydroxyl peak envelopes and acid dimer bands, allows for their direct detailed characterization. This paper reviews the infrared spectra of selected saturated fatty monoacids and diacids, and their corresponding sodium, calcium, and zinc salts and, supported by newly recorded data, highlights the significance of their spectroscopic features.     

New tools for analysing degradation

New tools for analysing degradability are presented. The degradation product patterns and morphology changes are proved to be means to differentiate on the one hand physical/chemical (abiotic) and on the other hand biological (biotic) ageing of polymers. In the biotic environment an assimilation of carboxylic acids occurs and a series of longer n-alkanes (C21–C26) is present. In the abiotic samples carboxylic acids are identified but no n-alkanes. This is in agreement with the biodegradation mechanism of LDPE proposed by us 1987. Morphology changes as manifested by crystallinity (w_c) and lamella thickness (l) revealed a slow decrease of w_c and (l) in biotically aged samples while the corresponding abiotically aged ones show constant or increasing values. Chromatography of low molecular weight compounds and x-ray diffraction analysis of crystallinity and lamellae thickness creates an opportunity for a deeper insight into the degradation mechanisms.     

Preparation, crystal structure and thermal decomposition study of some trimethylsilyl esters of dicarbamic acids

Some new trimethylsilylated dicarbamic acid esters 1–9 and 10 were prepared. Their thermal decomposition was studied in n-alkanes as media. The reactions were monitored by gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS), respectively. Some N-silylated cyclic ureas 11–15 were also prepared from the corresponding esters 2–6 by thermolysis. The crystal structures of 2, 5 and 8 are also discussed. The crystal and molecular structures of 2 and 5 have very similar characteristics. Both molecules are sited via their molecular centre of symmetry on crystallographic inversion centres. The Carbamate groups are planar in all three cases as expected. An analysis of the data showed that the force due to Si---O conjugation which constrains the Si atom into the plane of the carbamate group is comparable to the crystal packing forces with a small out-of-plane movement being not unfavourable.     

Heat conduction in chain polymer liquids: molecular dynamics study on the contributions of inter- and intramolecular energy transfer

In this paper, the molecular mechanisms which determine the thermal conductivity of long chain polymer liquids are discussed, based on the results observed in molecular dynamics simulations. Linear n-alkanes, which are typical polymer molecules, were chosen as the target of our studies. Non-equilibrium molecular dynamics simulations of bulk liquid n-alkanes under a constant temperature gradient were performed. Saturated liquids of n-alkanes with six different chain lengths were examined at the same reduced temperature (0.7T(c)), and the contributions of inter- and intramolecular energy transfer to heat conduction flux, which were identified as components of heat flux by the authors' previous study [J. Chem. Phys. 128, 044504 (2008)], were observed. The present study compared n-alkane liquids with various molecular lengths at the same reduced temperature and corresponding saturated densities, and found that the contribution of intramolecular energy transfer to the total heat flux, relative to that of intermolecular energy transfer, increased with the molecular length. The study revealed that in long chain polymer liquids, thermal energy is mainly transferred in the space along the stiff intramolecular bonds. This finding implies a connection between anisotropic thermal conductivity and the orientation of molecules in various organized structures with long polymer molecules aligned in a certain direction, which includes confined polymer liquids and self-organized structures such as membranes of amphiphilic molecules in water.     

Encapsulation of a Phase‐Change Material in Nanocapsules with a Well‐Defined Hole in the Wall for the Controlled Release of Drugs

As a class of biocompatible and biodegradable phase‐change materials, natural fatty acids have received considerable interest in recent years for temperature‐controlled release of drugs. However, the poor dispersibility and colloidal stability of their nanoparticles under physiological conditions place a major limitation on their applications in biomedicine. Herein, we report a facile method for encapsulating a mixture of two natural fatty acids (with a eutectic melting point at 39 °C) in a biocompatible, silica‐based nanocapsule to achieve both stable dispersion and controllable release of drugs. The nanocapsules have a well‐defined hole in the wall to ensure easy loading of fatty acids, together with multiple types of functional components such as therapeutics and near‐infrared dyes. The payloads can be released through the hole when the fatty acids are melted upon photothermal heating. The release profile can be controlled by varying the size of the hole and/or the duration of laser irradiation.