Studies on phosphatidylserine by tandem quadrupole and multiple stage quadrupole ion-trap mass spectrometry with electrospray ionization: Structural characterization and the fragmentation processes

Low-energy CAD product-ion spectra of various molecular species of phosphatidylserine (PS) in the forms of [M−H]⁻ and [M−2H+Alk]⁻ in the negative-ion mode, as well as in the forms of [M+H]⁺, [M+Alk]⁺, [M−H+2Alk]⁺, and [M−2H+3Alk]⁺ (where Alk=Li, Na) in the positive-ion mode contain rich fragment ions that are applicable for structural determination. Following CAD, the [M−H]⁻ ion of PS undergoes dissociation to eliminate the serine moiety (loss of C₃H₅NO₂) to give a [M−H−87]⁻ ion, which equals to the [M−H]⁻ ion of a phoshatidic acid (PA) and give rise to a MS³-spectrum that is identical to the MS²-spectrum of PA. The major fragmentation process for the [M−2H+Alk]⁻ ion of PS arises from primary loss of 87 to give rise to a [M−2H+Alk−87]⁻ ion, followed by loss of fatty acid substituents as acids (R_xCO₂H, x=1,2) or as alkali salts (e. g., R_xCO₂Li, x=1,2). These fragmentations result in a greater abundance of [M−2H+Alk−87−R₂CO₂H]⁻ than [M−2H+Alk−87−R₁CO₂H]⁻ and a greater abundance of [M−2H+Alk−87−R₂CO₂Li]⁻ than [M−2H+Alk−87−R₁CO₂Li]⁻; while further dissociation of the [M−2H+Alk−87−R_{2(or 1)}CO₂Li]⁻ ions gives a preferential formation of the carboxylate anion at sn-1 (R₁CO₂⁻) over that at sn-2 (R₂CO₂⁻). Other major fragmentation process arises from differential loss of the fatty acid substituents as ketenes (loss of R_x′CH=CO, x=1,2). This results in a more prominent [M−2H+Alk−R₂′CH=CO]⁻ ion than [M−2H+Alk−R₁′CH=CO]⁻ ion. Ions informative for structural characterization of PS are of low abundance in the MS²-spectra of both the [M+H]⁺ and the [M+Alk]⁺ ions, but are abundant in the MS³-spectra. The MS²-spectrum of the [M+Alk]⁺ ion contains a unique ion corresponding to internal loss of a phosphate group probably via the fragmentation processes involving rearrangement steps. The [M−H+2Alk]⁺ ion of PS yields a major [M−H+2Alk−87]⁺ ion, which is equivalent to an alkali adduct ion of a monoalkali salt of PA and gives rise to a greater abundance of [M−H+2Alk−87−R₁CO₂H]⁺ than [M−H+2Alk−87−R₂CO₂H]⁺. Similarly, the [M−2H+3Alk]⁺ ion of PS also yields a prominent [M−2H+3Alk−87]⁺ ion, which undergoes consecutive dissociation processes that involve differential losses of the two fatty acyl substituents. Because all of the above tandem mass spectra contain several sets of ion pairs involving differential losses of the fatty acid substituents as ketenes or as free fatty acids, the identities of the fatty acyl substituents and their positions on the glycerol backbone can be easily assigned by the drastic differences in the abundances of the ions in each pair.     

Tandem ESI mass spectrometry of 11α- and 11β-{4-[N,N-bis(2-chloroethyl)amino]phenyl}acetates of the estrane steroids

ESI MS studies showed that the major collision-activated fragmentation pathway of the [M + Na]⁺ ions of the title estranes involves elimination of NaCl and HCl molecules. Fragmentation of the [M + H]⁺ ions involves the functional groups, which provides information on their structures. The fragmentation of the [M + Na]⁺ and [M + H]⁺ ions was estimated by quantum-chemical calculations. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 92–95, January, 2008.     

A new copper containing MALDI matrix that yields high abundances of [Peptide + Cu]+ ions

The dinuclear copper complex (α-cyano-4-hydroxycinnamic acid (CHCA) copper salt (CHCA)₄Cu₂), synthesized by reacting CHCA with copper oxide (CuO), yields increased abundances of [M + xCu − (x−1)H]⁺ (x = 1–6) ions when used as a matrix for matrix-assisted laser desorption ionization (355 nm Nd:YAG laser). The yield of [M + xCu − (x−1)H]⁺ (x = 1∼6) ion is much greater than that obtained by mixing peptides with copper salts or directly depositing peptides onto oxidized copper surfaces. The increased ion yields for [M + xCu − (x−1)H]⁺ facilitate studies of biologically important copper binding peptides. For example, using this matrix we have investigated site-specific copper binding of several peptides using fragmentation chemistry of [M + Cu]⁺ and [M + 2Cu − H]⁺ ions. The fragmentation studies reveal interesting insight on Cu binding preferences for basic amino acids. Most notable is the fact that the binding of a single Cu⁺ ion and two Cu⁺ ions are quite different, and these differences are explained in terms of intramolecular interactions of the peptide-Cu ionic complex.     

In-source decay and fragmentation characteristics of peptides using 5-aminosalicylic acid as a matrix in matrix-assisted laser desorption/ionization mass spectrometry

The use of 5-aminosalicylic acid (5-ASA) as a new matrix for in-source decay (ISD) of peptides including mono- and di-phosphorylated peptides in matrix-assisted laser desorption/ionization (MALDI) mass spectrometry (MS) is described. The use of 5-ASA in MALDI-ISD has been evaluated from several standpoints: hydrogen-donating ability, the outstanding sharpness of molecular and fragment ion peaks, and the presence of interference peaks such as metastable peaks and multiply charged ions. The hydrogen-donating ability of several matrices such as α-cyano-4-hydroxycinnamic acid (CHCA), 2,5-dihydroxybenzoic acid (2,5-DHB), 1,5-diaminonaphthalene (1,5-DAN), sinapinic acid (SA), and 5-ASA was evaluated by using the peak abundance of a reduction product [M + 2H + H]⁺ to that of non-reduced protonated molecule [M + H]⁺ of the cyclic peptide vasopressin which contains a disulfide bond (S-S). The order of hydrogendonating ability was 1,5-DAN > 5-ASA > 2,5-DHB > SA = CHCA. The chemicals 1,5-DAN and 5-ASA in particular can be classified as reductive matrices. 5-ASA gave peaks with higher sharpness for protonated molecules and fragment ions than other matrices and did not give any interference peaks such as multiply-protonated ions and metastable ions in the ISD mass spectra of the peptides used. Particularly, 1,5-DAN and 5-ASA gave very little metastable peaks. This indicates that 1,5-DAN and 5-ASA are more “cool” than other matrices. The 1,5-DAN and 5-ASA can therefore be termed “reductive cool” matrix. Further, it was confirmed that ISD phenomena such as N-Cα bond cleavage and reduction of S-S bond is a single event in the ion source. The characteristic fragmentations, which form a− and (a + 2)-series ions, [M + H − 15]⁺, [M + H − 28]⁺, and [M + H − 44]⁺ ions in the MALDI-ISD are described.     

Electrospray ionization multiple-stage linear ion-trap mass spectrometry for structural elucidation of triacylglycerols: Assignment of fatty acyl groups on the glycerol backbone and location of double bonds

Linear ion-trap multiple-stage mass spectrometric approach (MS ⁿ ) towards nearly complete structural elucidation of triacylglycerol (TAG) including (1) assignment the fatty acid substituents on the glycerol backbone and (2) location of the double bond(s) on the unsaturated fatty acyl groups is reported. The characterization is established by the findings that MS² on the [M+Li]⁺ ions of TAG yields more abundant ions reflecting losses of the outer fatty acid substituents either as free acids (i.e., [M+Li-R₁CO₂H]⁺ and [M+Li-R₃CO₂H]⁺ ions) or as lithium salts (i.e., [M+Li-R₁CO₂Li]⁺ and [M+Li-R₃CO₂Li]⁺ ions) than the ions reflecting the similar losses of the inner fatty acid substituent (i.e., [M+Li-R₂CO₂Li]⁺ and [M+Li-R₂CO₂Li]⁺ ions). Further dissociation (MS³) of [M+Li-R _n CO₂H]⁺ (n=1, 2, or 3) gives rise to the ion series locating the double bonds along the fatty acid chain. These ions arise from charge-remote fragmentations involving β-cleavage with γ-H shift, analogous to those seen for the unsaturated long-chain fatty acids characterized as initiated ions. Significant differences in abundances in the ion pairs reflecting the additional losses of the fatty acid moieties, respectively, were also seen in the MS³ spectra of the [M+Li-R _n CO₂H]⁺ and [M+Li-R _n CO₂Li]⁺ ions, leading to confirmation of the fatty acid substituents on the glycerol backbone. MS ⁿ on the [M+Na]⁺ and [M+NH₄]⁺ adduct ions also affords location of fatty acid substituents on the glycerol backbone, but not the position of the double bond(s) along the fatty acid chain. Unique ions from internal losses of the glycerol residues were seen in the MS³ spectra of [M+Alk-R _n CO₂H]⁺ (n=1, 2, 3) and of [M+Alk-R _n CO₂Alk]⁺ (Alk=Li, Na, NH₄; n=1, 3). They are signature ions for glycerides and the pathways leading to their formation may involve rearrangements.     

Differentiation of α- or β-Aspartic Isomers in the Heptapeptides by the Fragments of [M + Na]<Superscript>+</Superscript> Using Ion Trap Tandem Mass Spectrometry

Electrospray ionization coupled with low energy collision induced dissociation (CID) in an ion trap mass spectrometer was used to examine the fragmentation patterns of the [M + Na]⁺ of eight pairs of heptapeptides containing α- or β-Asp residues in second and sixth amino acid positions, respectively. Selective cleavages at the peptide backbone C-terminal to two Asp residues were observed, which generated a series of C-terminal y₅ ions and N-terminal b₆ ions. Two typical ions: [ \texty₅ + \textNa-\textH ] ⁺ {\left[ {{{\text{y}}_{{5}}} + {\text{Na}}-{\text{H}}} \right]^{ + }} and [ \textb₆ + \textNa + \textOH ] ⁺ {\left[ {{{\text{b}}_{{6}}} + {\text{Na}} + {\text{OH}}} \right]^{ + }} , produced by α-Asp containing peptides were noted to be much more abundant than those of the peptides with β-Asp, which could be used for distinction of the isomers in Asp2 and Asp6, respectively. In addition, a series of internal ions generated by simultaneous cleavages at Asp residues were detected. Competitive reactions of carboxylic groups occurred between Asp6 side chain and C-terminus. Formation mechanisms of most product ions are proposed. The results obtained in this work are significant since low energy CID has been demonstrated to be effective for the distinction of Asp isomers.     

Amino acid influence on copper binding to peptides: Cysteine versus arginine

Matrix assisted laser desorption/ionization (MALDI) time-of-flight (TOF) mass spectrometry (MS) and theoretical calculations [density functional theory (DFT)] were utilized to investigate the influence of cysteine side chain on Cu⁺ binding to peptides and how Cu⁺ ions competitively interact with cysteine (−SH/SO₃H) versus arginine. Results from theoretical and experimental (fragmentation reactions) studies on [M+Cu]⁺ and [M+2Cu−H]⁺ ions suggest that cysteine side chains (−SH) and cysteic acid (−SO₃H) are important Cu⁺ ligands. For example, we show that Cu⁺ ions are competitively coordinated to the −SH or SO₃H groups; however, we also present evidence that the proton of the SH/SO₃H group is mobile and can be transferred to the arginine guanidine group. For [M+2Cu−H]⁺ ions, deprotonation of the −SH/SO₃H group is energetically more favorable than that of the carboxyl group, and the resulting thiolate/sulfonate group plays an important role in the coordination structure of [M+2Cu−H]⁺ ions, as well as the fragmentation patterns.     

Synthesis and crystal structure of one-dimensional heterotrimetallic coordination polymer {[(Dipic)2Cu]4 · Mg(H2O)2Na4(H2O)14}n · nNa2(H2O)10 · 2nCH3OH

A novel heterotrimetallic complex {[(Dipic)₂Cu]₄ · Mg(H₂O)₂Na₄(H₂O)_{14 n} · nNa₂(H₂O)₁₀ · 2nCH₃OH (H₂Dipic = pyridine-2,6-dicarboxylic acid) has been synthesized and structurally determined by X-ray diffraction method. The compound crystallizes in the triclinic system, space group P [`1]\bar 1, with a = 13.5523(13), b = 14.1859(13), c = 14.3213(14) ?, α = 62.6160(10)°, β = 68.2540(10)°, γ = 89.7110(10)°, V = 2224.7(4)?³, F(000) = 1144, M _r = 2237.70, Z = 1, ρ _c = 1.670 g cm⁻³, μ = 1.095 mm⁻¹, final R = 0.0507, wR = 0.1418 for 8042 independent reflections with R _int = 0.0228. According to the structure determination, the complex is composed of novel one-dimensional (1D) alternating chains, dinuclear Na(I) units, and lattice methanol molecules. The infinite 1D chain structure is built up with many of polymeric [(Dipic)₂Cu]₄ · Mg(H₂O)₂Na₄(H₂O)₁₄ units, which consists of four six-coordinated Cu²⁺ ions, one six-coordinated Mg²⁺ ion, two five-coordinated Na⁺ ions, and two six-coordinated Na⁺ ions. The 1D alternating chains are linked with another dinuclear Na(I) units by extensive hydrogen bonds to form a three-dimensional (3D) supramolecular structure in which uncoordinated methanol molecules act as space filling particles.     

Characteristic features of mass-spectra of some nitroxide radicals

Some compounds containing mono- and polynitroxide radicals have been investigated and characterized by electron ionization (EI), chemical ionization (CI), and matrix-assisted laser desorption-ionization (MALDI) mass spectrometry. Some characteristics of the mass spectra of these radicals are demonstrated. It was found that, under CI and MALDI conditions, ions [M+nH]⁺ are formed along with monoprotonated molecules [M+H]⁺, depending on the type of the radical n = 2–5.     

Atmospheric pressure ionization mass spectrometry techniques for the analysis of alkyl ethoxysulfate mixtures

This paper compares two liquid introduction atmospheric pressure ionization techniques for the analysis of alkyl ethoxysulfate (AES) anionic surfactant mixtures by mass spectrometry, i. e., electrospray ionization (ESI) in both positive and negative ion modes and atmospheric pressure chemical ionization (APCI) in positive ion mode, using a triple quadrupole mass spectrometer. Two ions are observed in ESI(+) for each individual AES component, [M + Na]⁺ and a “desulfated” ion [M − SO₃ + H]⁺, whereas only one ion, [M − Na]⁻ is observed for each AES component in ESI(−). APCI(+) produces a protonated, “desulfated” ion of the form [M − NaSO₃ + 2H]⁺ for each AES species in the mixture under low cone voltage (10 V) conditions. The mass spectral ion intensities of the individual AES components in either the series from ESI(+) or APCI(+) can be used to obtain an estimate of their relative concentrations in the mixture and of the average ethoxylate (EO) number of the sample. The precursor ions produced by either ESI(+) or ESI(−), when subjected to low-energy (50 eV) collision-induced dissociation, do not fragment to give ions that provide much structural information. The protonated, desulfated ions produced by APCI(+) form fragment ions which reveal structural information about the precursor ions, including alkyl chain length and EO number, under similar conditions. APCI(+) is less susceptible to matrix effects for quantitative work than ESI(+). Thus APCI(+) provides an additional tool for the analysis of anionic surfactants such as AES, especially in complex mixtures where tandem mass spectrometry is required for the identification of the individual components.     

The nature of ion exchange selectivity of phenol-formaldehyde sorbents with respect to cesium and rubidium ions

The structure of aqua complexes of alkali metal ions Me⁺(H₂O) _n , n = 1−6, where Me is Li, Na, K, Rb, and Cs, and complexes of 2,6-dimethylphenolate anion (CH₃)₂PhO⁻ selected as a model of the elementary unit of phenol-formaldehyde ion exchanger with hydrated alkali metal cations Me⁺(H₂O) _n , n = 0−5, was studied by the density functional method. The energies of successive hydration of the cations and the energies of binding of alkali metal hydrated cations with (CH₃)₂PhO⁻ depending on the number of water molecules n were calculated. It was shown that the dimethylphenolate ion did not have specific selectivity with respect to cesium and rubidium ions. The energies of hydration and the energies of binding of alkali metal cations with (CH₃)₂PhO⁻ decreased in the series Li⁺ > Na⁺ > K⁺ > Rb⁺ > Cs⁺ as n increased. The conclusion was drawn that the reason for selectivity of phenol-formaldehyde and other phenol compounds with respect to cesium and rubidium ions was the predomination of the ion dehydration stage in the transfer from an aqueous solution to the phenol phase compared with the stage of binding with ion exchange groups.     

Toward total structural analysis of cardiolipins: multiple-stage linear ion-trap mass spectrometry on the [M − 2H + 3Li]<Superscript>+</Superscript> ions

ESI multiple-stage linear ion-trap (LIT) mass spectrometric approaches for a near-complete structural characterization of cardiolipins (CLs), including identification of the fatty acyl substituents, assignment of the fatty acid substituents on the glycerol backbone, and location of the double-bond(s) or cyclopropyl group along the fatty acid chain are described. Upon collisionally activated dissociation (CAD) on the [M − 2H + 3Li]⁺ ions of CL in an ion-trap (MS²), two sets of fragment ions (designated as (a + 136) and (b + 136) ions) analogous to those previously reported for the [M − 2H + 3Na]⁺ ions were observed, leading to assignment of the phosphatidyl moieties attached to 1′- or 3′-position of the central glycerol. Further dissociation of the (a + 136) (or (b + 136)) ions (MS³) gives rise to the (a + 136 − R_{1(or 2)}CO₂Li) (or b + 136 − R_{1(or 2)}CO₂Li) ion pairs that identify the fatty acid moieties and their position on the glycerol backbone. This is followed by MS⁴ on the (a + 136 − R_{1(or 2)}CO₂Li) (or b + 136 − R_{1(or 2)}CO₂Li) ion to eliminate a tricylic glycerophosphate ester residue (136 Da) to yield the (a − R_{1(or 2)}CO₂Li) ion, which is then subjected to MS⁵. The MS5 spectrum contains the structural information that locates the double-bond(s) or cyclopropyl group of the fatty acid substituents. Finally, the subsequent MS⁶ on the dilithiated fatty acid ions generated from MS⁵ also yields feature ions that confirm the assignment.     

Theoretical and experimental study of fullerenol molecules and ions C60(OH)24 ? n(OL)n and C60(OH)24 ? n(OL)nL+ successively substituted by Alkali Metal atoms L (n = 1?24)

The equilibrium geometric parameters and the energetic characteristics of fullerenol molecules and ions C₆₀(OH)_{24 − n} (OL) _n and C₆₀(OH)_{24 − n} (OL) _n L⁺ successively substituted by alkali metal atoms L with the number of substitutions n = 1–24 have been calculated by the density functional theory B3LYP/6-31G* method. For all compounds, the structure of the covalent [C₆₀O₂₄] cage in which the oxygen atoms are bound to the C atoms of the six-membered [C₆] rings of the fullerene cage, six O atoms per [C₆] ring. The lithium derivatives have been considered in most detail. Computations have shown that the first four single substitutions of Li for H in the OH groups attached to the same C₆ ring require very low energy inputs, no more than 1 kcal/mol, and can spontaneously occur under common conditions. The further fifth and sixth single substitutions in the same C₆ ring are endothermic, but the required energy inputs are also modest (on the order of few kcal/mol). The first and second cooperative substitutions of Li for H simultaneously in all four hydroxylated C₆ rings require energy inputs of ∼3 and 11.6 kcal/mol, respectively; in the third and fourth fourfold substitutions, the energies increase by ∼15–16 kcal/mol. The mean partial energy per single substitution of Li for H in this series (n = 1−6) is ∼2 kcal/mol. Calculations have predicted that all C₆₀(OH)_{24 − n} (OLi) _n molecules with intermediated degrees of substitution (n = 1−16) can be obtained under the conditions of relatively low energy inputs (for example, under the conditions of the MALDI experiment) and can exist in the isolated state. For the sodium- and potassium-substituted analogues, the qualitative pattern persists, but the H/Na and H/K substitutions are somewhat more endothermic. The computational results are compared with the MALDI mass spectrum of the [C₆₀(OH) _x (ONa) _y -CH₃COONa) system.     

Studies on phosphatidylglycerol with triple quadrupole tandem mass spectrometry with electrospray ionization: Fragmentation processes and structural characterization

Negative-ion low-energy collisionally activated dissociation (CAD) tandem mass spectrometry of electrospray-produced ions permits structural characterization of phosphatidylglycerol (PG). The major ions that identify the structures arise from neutral loss of free fatty acid substituents ([M − H − R _x CO₂H]⁻) and neutral loss of the fatty acids as ketenes ([M − H − R′ _x CH = C = O]⁻), followed by consecutive loss of the glycerol head group. The abundances of the ions arising from neutral loss of the sn-2 substutient as a free fatty acid ([M − H − R₂CO₂H]⁻) or as a ketene ([M − H − R′₂CH = C = O]⁻) are greater than those of the product ions from the analogous losses at sn-1. Nucleophilic attack of the anionic phosphate site on the C-1 or the C-2 of the glycerol to which the carboxylates attached expels the sn-1 (R₁CO₂⁻) or the sn-2 (R₂CO₂⁻) carboxylate anion, resulting in a greater abundance of R₂COO⁻ than R₁COO⁻. These features permit assignments of fatty acid substituents and their position in the glycerol backbone. The results are also consistent with our earlier findings that pathways leading to those losses at sn-2 are sterically more favorable than those at sn-1. Fragment ions at m/z 227, 209 and 171 reflect the glycerol polar head group and identify the various PG molecules. Both charge-remote fragmentation (CRF) and charge-drive fragmentation (CDF) processes are the major pathways for the formation of [M − H − R _x COOH]⁻ ions. The CRF process involves participation of the hydrogen atoms on the glycerol backbone, whereas the CDF process involves participation of the exchangeable hydrogen atoms of the glycerol head group. The proposed fragmentation pathways are supported by CAD tandem mass spectrometry of the analogous precursor ions arising from the H-D exchange experiment, and further confirmed by source CAD in combination with tandem mass spectrometry.     

Quantum chemical analysis of possible fragmentation of [M + H]<Superscript>+</Superscript> and [M + Na]<Superscript>+</Superscript> complexes of monosubstituted methane,cyclohexane, and benzene derivatives in mass spectrometric studies

The formation and fragmentation energies of the proton and sodium cation complexes with monosubstituted methane, cyclohexane, and benzene derivatives in which carbon atoms are bonded to substituents (NH₂, OH, F, Cl, Br, ONO₂, NO₂, COOH, CN, and Ph) were calculated by the B3LYP/6-31G(d) method. For [M + Na]⁺ complexes, the formation energies are much lower (and differ from one another to a much lesser extent), while the dissociation energies are much higher, than the corresponding energies of the [M + H]⁺ complexes. Na⁺ cation shows a lower selectivity toward localization at functional groups in molecules compared to H⁺. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 2, pp. 246–249, February, 2008.     

Processes of dissociative electron capture by 20-hydroxyecdysone molecules

The peculiarities of dissociative electron capture by 20-hydroxyecdysone molecules with the formation of fragment negative ions were studied. In the region of high electron energies (5–10 eV), processes of skeleton bond rupture are accompanied by the elimination of H₂O and H₂ molecules. In the region of thermal energies of electrons (≈0 eV), the mass spectrum is formed mainly by the [M−nH₂O]^.− (n=1–3) and [M−H₂−nH₂O]^.− (n=0−3) ions that are generated exclusively by the rearrangement. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 709–712, April, 2000.     

Infrared Multiple Photon Dissociation Action Spectroscopy and Theoretical Studies of Diethyl Phosphate Complexes: Effects of Protonation and Sodium Cationization on Structure

The gas-phase structures of deprotonated, protonated, and sodium-cationized complexes of diethyl phosphate (DEP) including [DEP − H]⁻, [DEP + H]⁺, [DEP + Na]⁺, and [DEP − H + 2Na]⁺ are examined via infrared multiple photon dissociation (IRMPD) action spectroscopy using tunable IR radiation generated by a free electron laser, a Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) with an electrospray ionization (ESI) source, and theoretical electronic structure calculations. Measured IRMPD spectra are compared to linear IR spectra calculated at the B3LYP/6-31G(d,p) level of theory to identify the structures accessed in the experimental studies. For comparison, theoretical studies of neutral complexes are also performed. These experiments and calculations suggest that specific geometric changes occur upon the binding of protons and/or sodium cations, including changes correlating to nucleic acid backbone geometry, specifically P–O bond lengths and ∠OPO bond angles. Information from these observations may be used to gain insight into the structures of more complex systems, such as nucleotides and solvated nucleic acids.     

Nonlinear modeling of equilibrium sorption of selected anionic adsorbates from aqueous solutions on cellulosic substrates. Part 1: model development

A new nonlinear isothermal sorption model, incorporating Donnan equilibrium and electrical neutrality in the classical sorption model of direct dyes onto cellulosic substrates, as model adsorbates, is proposed. The nonlinear isothermal model was used to simulate equilibrium sorption of adsorbates containing ionic charges (z) of −2 to −4 on cellulose adsorbents at various temperature (T) and sodium chloride concentrations ([NaCl]). A detailed analysis of simulation results demonstrates that results based on the nonlinear sorption model highly agree with those based on the log-linear sorption model when the deviation in the concentration of sodium ions in the aqueous solution ([Na⁺] _S ) relative to [NaCl] used in the sorption system is restricted to <5.0%. Compared to the log-linear model, the nonlinear model avoids using graphical techniques that are relatively insensitive for determining important sorption parameters such as the internal accessible volume (V) and the standard affinity associated with sorption (−Δμ°). The nonlinear sorption model was used to examine the correlation of fit for previously reported sorption data. The model parameters V and −Δμ° based on curve fits were used to estimate V for cellulose as well as −Δμ°. The values were found to match those based on the conventional log-linear model when deviations of [Na⁺] _S relative to [`([\textNa ⁺ ]_S )] \overline{{[{\text{Na}}^{ + } ]_{S} }} were below 5%. The nonlinear model therefore provides a convenient and accurate technique to interpret the sorption of a range of anionic adsorbates on cellulosic substrates.     

A mass spectrometry study of alkanes in air plasma at atmospheric pressure

The positive APCI-mass spectra in air of linear (n-pentane, n-hexane, n-heptane, n-octane), branched [2,4-dimethylpentane, 2,2-dimethylpentane and 2,2,4-trimethylpentane (i-octane)], and cyclic (cyclohexane) alkanes were analyzed at different mixing ratios and temperatures. The effect of air humidity was also investigated. Complex ion chemistry is observed as a result of the interplay of several different reagent ions, including atmospheric ions O₂^+•, NO⁺, H₃O⁺, and their hydrates, but also alkyl fragment ions derived from the alkanes. Some of these reactions are known from previous selected ion/molecule reaction studies; others are so far unreported. The major ion formed from most alkanes (M) is the species [M − H]⁺, which is accompanied by M^+• only in the case of n-octane. Ionic fragments of C _n H_2n ^+1/+ composition are also observed, particularly with branched alkanes: the relative abundance of such fragments with respect to that of [M − H]⁺ decreases with increasing concentration of M, thus suggesting that they react with M via hydride abstraction. The branched C₇ and C₈ alkanes react with NO⁺ to form a C₄H₁₀NO⁺ ion product, which upon collisional activation dissociates via HNO elimination. The structure of t-Bu⁺(HNO) is proposed for such species, which is reasonably formed from the original NO⁺(M) ion/molecule complex via hydride transfer and olefin elimination. Finally, linear alkanes C₅–C₈ give a product ion corresponding to C₄H₇⁺(M), which we suggest is attributed to addition of [M − H]⁺ to C₄H₈ olefin formed in the charge-transfer-induced fragmentation of M. The results are relevant to applications of nonthermal plasma processes in the fields of air depuration and combustion enhancement.     

Simultaneous Determination of Tramadol and Acetaminophen in Human Plasma by LC–ESI–MS

This study presents a high-performance liquid chromatography–electrospray ionization–mass spectrometric (LC–ESI–MS) method for the simultaneous determination of tramadol and acetaminophen in human plasma using phenacetinum as the internal standard. After alkalization with saturated sodium bicarbonate, both compounds were extracted from human plasma with ethyl acetate and were separated by HPLC on a Hanbon LiChrospher CN column with a mobile phase of 10 mM ammonium acetate buffer containing 0.5% formic acid–methanol (40:60, v/v) at a flow rate of 1 mL min⁻¹. Analytes were determined using electrospray ionization in a single quadrupole mass spectrometer. LC–ESI–MS was performed in the positive selected-ion monitoring (SIM) mode using target ions at [M+H]⁺ m/z 264.3 for tramadol, [M+H]⁺ m/z 152.2 for acetaminophen and [M+H]⁺ m/z 180.2 for phenacetinum. Calibration curves were linear over the range of 5–600 ng mL⁻¹ for tramadol and 0.03–16 μg mL⁻¹ for acetaminophen. The inter-run relative standard deviations were less than 14.4% for tramadol and 12.3% for acetaminophen. The intra-run relative standard deviations were less than 9.3% for tramadol and 7.9% for acetaminophen. The mean plasma extraction recovery for tramadol and acetaminophen were in the ranges of 82.7–85.9 and 83.6–85.3%. The method was applied to study the pharmacokinetics of a new formulation of tramadol/acetaminophen tablet in healthy Chinese volunteers.