Unusual neutral and radical losses in 2′-substituted N-phenylanthranilic acids on electron impact

Unusual expulsions of [H₂O + CO₂] from the M⁺˙ of N-(o-carboxyphenyl)anthranilic acid, [H₂O + CH₂O] from the M⁺˙ of N-(o-methoxyphenyl)anthranilic acid and [H₂O + ˙NO₂] from the M⁺˙ of N-(o-nitrophenyl) anthranilic acid were observed under electron impact conditions. These processes are stepwise in the corresponding para-substituted N-phenylanthranilic acids. The proposed fragmentation pathways and their mechanisms are supported by B/E linked-scan spectra, collision-activated decomposition (CAD)–mass-analysed ion kinetic energy (MIKE) spectra, high-resolution data, deuterium labelling and chemical substitution.     

Mass-spectrometric study of the cyclization of diazo ketones. 4. Cyclization of N'-phenyl-3-ureido- and N'-phenyl-3-thioureido-1-diazoalkan-2-ones. 2-Anilino-5,6-dihydro-4H-1,3-thiazin-5-ones

A comparison of the mass spectra of N'-phenyl-3-thioureido-1-diazo-alkan-2-ones (I) with the mass spectra of 2-anilino-5,6-dihydro-4H-1,3-thiazin-5-ones (II) and N'-phenyl-3-ureido-1-diazoalkan-2-ones (III) makes it possible to conclude that under the influence of electron impact the molecular ions of the diazo ketones, through the loss of a molecule of nitrogen, undergo only partial cyclization to the corresponding thiazinones (oxazinones in the case of III). In the case of diazo ketones III virtually all of the [M-N₂]⁺ ions undergo fragmentation without cyclization. Under chemical-ionization conditions (with isobutane as the gas-reactant) the principal fragmentation of the protonated ions of I and III entails cleavage of the C-N bonds. Only a small part of these ions lose a molecule of nitrogen, but it is impossible to establish the structures of the resulting [MH-N₂]⁺ ions from the mass-spectrometric data.See [1], for communication 3.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 4, pp. 473–480, April, 1983.     

Low-energy mass spectra of some aliphatic ketones

The charge exchange mass spectra of a selection of C₅-C₇ ketones have been measured using [CS₂]⁺˙, [COS]⁺˙ and [N₂O]_+. as reagent ions. The low energy charge exchange with [CS₂]⁺˙ or [COS]⁺˙ provides simple primary ion mass spectra, which readily permit structure elucidation in contrast to metastable ion spectra. In several cases, isomer distinction is easier from the charge exchange mass spectra than from the electron impact mass spectra. The energy transfer from [N₂O]⁺˙ is sufficiently high for complex spectra resembling electron impact mass spectra to be obtained.     

Mass-analysed ion kinetic energy and collisionally induced dissociation mass spectra of clusters of acetylated xylo-oligosaecharides with protonated ammonia and methylannine

Per-O-acetylated methyl glycosides of D -xylan-type di- and trisaccharides were studied by mass-analysed ion kinetic energy (MIKE) and collisionally induced dissociation (CID) mass Spectrometry using protonated ammonia and methylamine, respectively, as reaction gases in chemical ionization (CI). The oligosaccharides form abundant cluster ions, [M + NH₄]⁺ or [M + CH₃NH₃]⁺, and the main fragmentation of these ions in the MIKE and CID spectra is the cleavage of interglycosidic linkages. Thus, CI (NH₃) or CI (CH₃NH₂) spectra in combination with the MIKE or CID spectra allow the molecular masses, the masses of monosaccharide units and the branching point in oligosaccharides to be established. In the case of disaccharides, it is possible to distinguish the (1 → 2) linkage from the other types of linkages.     

Metastable ion decomposition and collisional activation mass spectra of 1,2,3-triarylpropen-1-ones

Substituents have been found to have a marked influence on the metastable ion decompositions and collisionally activated (CA) fragmentations of the M⁺˙ ion of a number of 1,2,3-triarylpropen-1-ones. An attempt has been made to confirm the structures of the rearrangement ions, [C₁₄H₁₀]⁺˙, [C₁₃H₁₁]⁺˙, [C₁₃H₉]⁺ and [C₁₂H₈]⁺˙ by comparison of their CA spectra with those of the corresponding ions produced from reference compounds. The results imply that [C₁₄H₁₀]⁺˙ and the M⁺˙ ions of phenanthrene and diphenylacetylene have a common structure, [C₁₃H₉]⁺ and the fluorenyl cation have a common structure and [C₁₂H₈]⁺˙ and biphenylene molecular ion have a common structure. The available data indicate that the ion at m/z 167 consists of a mixture of structures, likely possibilities being diphenylmethyl, phenyltropylium and dihydrofluorenyl cations.     

Chemical ionization and collisional activation spectra of α,β-unsaturated nitriles

A study of the chemical ionization (CI) and collisional activation (CA) spectra of a number of α, β-unsaturated nitriles has revealed that the even-electron ions such as [MH]⁺ and [MNH₄]⁺ produced under chemical ionization undergo decomposition by radical losses also. This results in the formation of M ⁺˙ ions from both [MH]⁺ and [MNH₄]⁺ ions. In the halogenated molecules losses of X˙ and HX compete with losses of H˙ and HCN. Elimination of X˙ from [MH]⁺ is highly favoured in the bromoderivative. The dinitriles undergo a substitution reaction in which one of the CN groups is replaced with a hydrogen radical and the resulting mononitrile is ionized leading to [M ? CN + 2H]⁺ under CI(CH₄) or [M ? CN + H + NH₄] and [M ? CN + H + N₂H₇]⁺ under CI(NH₃) conditions.     

A comparison of three experimental techniques for ion structure studies via collision-induced reactions: The [C5H8]+˙ example

Structure differentiation between [C₅H₈]⁺˙ ions, formed by electron ionization of various precursors, has been used as a test case for comparison of three experimental techniques involving collision-induced dissociation (CID). Low-energy CID in an rf-only quadrupole collision cell has been studied in the range 1–150 eV laboratory collision energy. These data have been compared with those obtained using mass-analyzed ion kinetic energy spectroscopy at 8 keV energy, and with results from dissociative charge-stripping (DCS) coupled with a second electron capture collision (EC) in order to remove intense interferences (DCS/EC). The greatest degree of structure differentiation was possible using the DCS/EC technique. The other two methods were comparable in this regard, although effects of pre-collision internal energy was apparent for collision energies much below 30 eV. Day-to-day reproducibility of spectra was most difficult to obtain for the low-energy CID technique. Of the [C₅H₈]⁺˙ ions thus tested, the isoprene molecular ion was clearly the best match to the fragment ion formed from limonene.     

Fragmentation of certain substituted azadispiro(5.1.5.2)pentadec-9-ene and azadispiro(4.1.4.2)tridec-8-ene derivatives under electron ionization

A study of the electron ionization mass spectra of certain azadispiro(5.1.5.2)pentadec-9-ene-7,15-diones and azadispiro(4.1.4.2)tridec-8-ene-6,13-diones and their derivatives has revealed that these molecules undergo fragmentation primarily by two routes, viz. loss of CO and elimination of the substituent on the pyrrolidine nitrogen. Under positive ionization conditions loss of CO is the predominant process in the diones as it releases the ring strain, while in the 6- or 7-ols loss of the substituent on nitrogen is the favoured pathway. The further decomposition pathways of these primary fragments [M ? CO]⁺˙ and [M ? OR³]⁺ have been delineated with the help of high-resolution mass measurements, D₂O exchange and metastable spectra, These compounds give very simple negative ion spectra showing only [M ? OR³]^? and [NCO]^? ions except the N-hydroxy compounds which show [M ? H]^? ions as well.     

Destabilized carbenium ions: α-carbomethoxy-α,α-dimethyl-methyl cations

Tertiary α-carbomethoxy-α,α-dimethyl-methyl cations a have been generated by electron impact induced fragmentation from the appropriately α-substituted methyl isobutyrates 1–4. The destabilized carbenium ions a can be distinguished from their more stable isomers protonated methyl methacrylate c and protonated methyl crotonate d by MIKE and CA spectra. The loss of I^— and Br˙ from the molecular ions of 1 and 2, respectively, predominantly gives rise to the destabilized ions a, whereas loss of Cl˙ from [3]^{+ ˙} results in a mixture of ions a and c. The loss of CH₃˙ from [4]⁺˙ favours skeletal rearrangement leading to ions d. The characteristic reactions of the destabilized ions a are the loss of CO and elimination of methanol. The loss of CO is associated by a very large KER and non-statistical kinetic energy release (T₅₀ = 920 meV). Specific deuterium labelling experiments indicate that the α-carbomethoxy-α,α-dimethyl-methyl cations a rearrange via a 1,4-H shift into the carbonyl protonated methyl methacrylate c and eventually into the alkyl-O protonated methyl methacrylate before the loss of methanol. The hydrogen rearrangements exhibit a deuterium isotope effect indicating substantial energy barriers between the [C₅H₉O₂]⁺ isomers. Thus the destabilized carbenium ion a exists as a kinetically stable species within a potential energy well.     

Rearrangements in aryl substituted α, β-unsaturated nitriles. A collisional activation study

The rearrangement reactions following electron ionization in a number of aryl substituted conjugated nitriles have been studied using labelled compounds and collisional activation (CA) spectroscopy. The results indicate that α-phenyl cinnamonitriles and 9,10-dihydro-9-cyanophenanthrene rearrange to a common intermediate which loses CH₃˙ or CH₂CN˙ to give the ions at m/z 190 and 165. The CA spectrum of the deuterated analogue (compound 2) shows that there is a complete hydrogen scrambling prior to the loss of the CH₃˙ radical. The fluoroderivatives (compounds 5 and 6) behave similarly to the parent nitrile. The introduction of chlorine or bromine into the aromatic ring alters the fragmentation pattern and the only favoured decomposition pathway is the loss of a halogen radical. The CA spectra of the doubly charged ions at m/z 102 and 88 are also discussed. The CA spectrum of the M ⁺˙ ion 1,1-dicyano-2-phenyl ethylene is characterized by the presence of a rearrangement ion atm/z 103 (PhCN^{+ ˙}).     

Structure of gas phase [C5H6]+˙ ions

Charge-stripping spectra have been used to differentiate ionized cyclopentadiene from its acyclic isomers. The minimum amounts of translational energy lost during the charge-stripping processes and the relative charge-stripping efficiencies, which are also structurally important parameters, have been measured for these ionic species. [C₅H₆]⁺˙ ions, formed by dissociative ionization of various precursors in the ion source are found, usually, to be a mixture of cyclic and acyclic ions. In contrast, [C₅H₆]⁺˙ ions, derived from the dissociation of metastable molecular ions from a series of organic compounds, have the cyclopentadienyl structure. This structure was confirmed by collision-induced dissociation of ions formed in the first field-free region of a triple sector mass spectrometer.     

Characterization of N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives using electrospray ionization multi‐stage mass spectrometry

N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives, intermediates particularly useful in the synthesis of partially modified retro‐inverso peptides, have been characterized by both positive and negative ion electrospray ionization (ESI) ion‐trap multi‐stage mass spectrometry (MSⁿ). The MS² collision induced dissociation (CID) spectra of the sodium adduct of the formamides derived from the corresponding N‐Fmoc/Z‐amino acids, dipeptide and tripeptide acids show the [M + Na‐NH₂CHO]⁺ ion, arising from the loss of formamide, as the base peak. Differently, the MS² CID spectra of [M + Na]⁺ ion of all the N‐Boc derivatives yield the abundant [M + Na‐C₄H₈]⁺ and [M + Na‐Boc + H]⁺ ions because of the loss of isobutylene and CO₂ from the Boc protecting function. Useful information on the type of amino acids and their sequence in the N‐protected dipeptidyl and tripeptidyl‐N′‐formamides is provided by MS² and subsequent MSⁿ experiments on the respective precursor ions. The negative ion ESI mass spectra of these oligomers show, in addition to [M‐H]^?, [M + HCOO]^? and [M + Cl]^? ions, the presence of in‐source CID fragment ions deriving from the involvement of the N‐protecting group. Furthermore, MSⁿ spectra of [M + Cl]^? ion of N‐protected dipeptide and tripeptide derivatives show characteristic fragmentations that are useful for determining the nature of the C‐terminal gem‐diamino residue. The present paper represents an initial attempt to study the ESI‐MS behavior of these important intermediates and lays the groundwork for structural‐based studies on more complex partially modified retro‐inverso peptides. Copyright © 2013 John Wiley & Sons, Ltd.     

Evaluation of methane negative ion chemical ionization mass spectra of polycyclic aromatic hydrocarbons and related compounds

Negative ion chemical ionization (NICI) mass spectra with methane as reagent gas and the ion abundance ratios of the negative to the positive base peak for 51 polycyclic aromatic hydrocarbons and related compounds were measured and evaluated for highly sensitive detection and isomer differentiation. Either [M ? H]^?, M^?˙ or MH^? was the base peak, except for one compound with [M ? H₂]^?˙ as its base peak. The numbers of compounds with [M ? H]^?, M^?˙ or MH^? as their base peaks were 17, 26 and 7, respectively. Many of the compounds with [M ? H]^? as the base peak had an aliphatic part in their structure. The average value of N/P (negative/positive ion abundance ratio at the base peaks) was < 1. Many of the compounds with M^?˙ as the base peak had a relatively high electron affinity. A correlation between electron affinities and ion abundances was found. In most cases, the N/P ratios were > 1, and even reached 400 in benzo [a] pyrene. Many of the compounds with MH^? as their base peaks had a phenyl group, in which cases the N/P ratios were < 1. In the case of compounds with 18 or fewer carbon atoms, in particular, it was easy to distinguish isomers by comparing their NICI mass spectra. The N/P values served as a guideline in sensitive detection. Nine compounds achieved an N/P of ≥50.     

Ortho effects in schiff bases of diaminodicyanoethene

In the electron impact mass spectra of azomethines derived from various substituted aromatic aldehydes and diarninodicyanoethene the superposition of two ortho effects concurring with the azomethine group is apparent: one involving the amino group of the diaminodicyanoethene part accounts for the cyclization to [C₅H₃N₄]⁺ ions and the other involving ortho substituents of the benzylidene part which can interact with the azomethine moiety is responsible for specific fragment ions, suppressing the typical fragmentations of azomethines. The ortho effect was studied for the o-nitro derivative by labelling experiments, analysis of metastable transitions and collisional activation comparing model ions, demonstrating that the specific [M-H₂O]⁺˙ and [C₇H₅NO₂]⁺˙ ions are the result of cyclization processes.     

Mass spectral behavior of n-alkynes

The 70 e V-electron impact mass spectra of the C₇–C₁₀ n-alkynes have been determined as well as the metastable ion spectra of the molecular ions and the [CS₂]⁺ and [N₂O]⁺ charge exchange mass spectra of the C₇-C₉ n-alkynes. The metastable ion mass spectra provide only a limited opportunity to distinguish between isomers; however, the 70-eV EI mass spectra of isomeric compounds permit a ready distinction between isomers. The [CS₂]⁺ charge exchange mass spectra of isomeric compounds also show substantial differences. The [N₂O]⁺ charge exchange mass spectra do not show the enhancement of β-fission fragments observed in field ionization experiments, despite representing ions of similar internal energy, and it is concluded that field dissociation is responsible for the β-fission fragments in the field ionization experiments.     

Charge stripping mass spectra: A method for identifying isomeric [C5H8]+˙ and [C3H6]+˙ ions

Charge stripping (collisional ionization) mass spectra are reported for isomeric [C₅H₈]⁺˙ and [C₃H₆]⁺˙ ions. The results provide the first method for adequately quantitatively determining the structures and abundances of these species when they are generated as daughter ions. Thus, loss of H₂O from the molecular ions of cyclopentanol and pentanal is shown to produce mixtures of ionized penta-1,3- and -1,4-dienes. Pent-1-en-3-ol generates [penta-1,3-diene]⁺˙. [C₃H₆]⁺˙ ions from ionized butane, methylpropane and 2-methylpropan-1-ol are shown to have the [propene]⁺˙ structure, whereas [cyclopropane]⁺˙ is produced from ionized tetrahydrofuran, penta-1,3-diene and pent-1-yne.     

Massenspektrometrie isomerer Diazaphenanthrene—I

The mass spectra of five diazaphenanthrenes formed by photochemical cyclodehydrogenation of styryl diazines are investigated. It is shown that fragmentation of these compounds starts almost exclusively at the heterocyclic part of the molecule and proceeds by competitive α-cleavage. From the intensity ratios of the ions [M ? H˙]⁺, [M ? HCN]⁺˙, [M ? N₂]⁺˙ and [M ? 2 HCN]⁺˙ generated in this way, each isomer can unequivocally be identified.     

Characterization of five [C4H7O]+ Ion structures. Fragmentation of the 2-pentanone molecular ion

The [C₄H₇0]⁺ ions [CH₂?CH? C(?OH)CH₃]⁺ (1), [CH₃CH?CH? C(?OH)H]⁺ (2), [CH₂?C(CH₃)C(?OH)H]⁺ (3), [Ch₃CH₂CH₂C?O]⁺ (4) and [(CH₃)₂CHC?O]⁺ (5) have been characterized by their collision-induced dissociation (CID) mass spectra and charge stripping mass spectra. The ions 1–3 were prepared by gas phase protonation of the relevant carbonyl compounds while 4 and 5 were prepared by dissociative electron impact ionization of the appropriate carbonyl compounds. Only 2 and 3 give similar spectra and are difficult to distinguish from each other; the remaining ions can be readily characterized by either their CID mass spectra or their charge stripping mass spectra. The 2-pentanone molecular ion fragments by loss of the C(1) methyl and the C(5) methyl in the ratio 60:40 for metastable ions; at higher internal energies loss of the C(1) methyl becomes more favoured. Metastable ion characteristics, CID mass spectra and charge stripping mass spectra all show that loss of the C(1) methyl leads to formation of the acyl ion 4, while loss of the C(5) methyl leads to formation of protonated vinyl methyl ketone (1). These results are in agreement with the previously proposed potential energy diagram for the [C₅H₁₀O]⁺˙ system.     

Ion–molecule reaction in the gas phase 4—Stereospecific nucleophilic substitution under ammonia chemical ionization conditions from diastereomeric methyl and benzyl ethers of 3-hydroxy steroids

The ammonia chemical ionization (CI/[NH₄⁺]) mass spectra of a series of diastereomeric methyl and benzyl ethers derived from 3-hydroxy steroids (unsaturated in position 5 and saturated) have been studied. The adduct ions [M+NH₄]⁺ and [MH]⁺ and the substitution product ions [M+NH₄? ROH]⁺ (thereafter called [M_sH]⁺) are characterized by an inversion in their relative stabilites in relation to their initial configuration. [M+NH₄]_α⁺ and [MH]_α⁺ formed from the α-Δ⁵-steroid isomers are stabilized by the presence of a hydrogen bond which is not possible for the β-isomers. This stereochemical effect has also been observed in the mass analysed ion kinetic energy (MIKE) spectra of [M+NH₄]⁺ and [MH]⁺. The MIKE spectra of [M_sH]⁺ indicate that those issued from the β-isomers are more stable than the one originating from the α-isomers. This behavior is also observed in the first field free region (HV scan spectra) for [MH]⁺, [M_sH]⁺ and [M+NH₄]⁺ which are precursors of the ethylenic carbocations (base peak in the conventional CI/[NH₄]⁺ spectra). Mechanisms, such as S_N1 and S_Ni, have been ruled out for the formation of [M_sH]⁺, but instead the data support an S_N2 mechanism during the ion-molecule reaction between [M+NH₄]⁺ and NH₃.     

Positive electron impact and chemical ionization mass spectra of some nitramine nitrates

The positive electron impact (EI) and isobutane chemical ionization (CI) mass spectra of six nitramine nitrates were studied with the aid of some accurate mass measurements. In the EI spectra, β fission relative to both the nitramine and nitrate ester is important. In the CI spectra a major ion occurs at [MH – 45]⁺ and was found to be mainly due to [M + 2H ? NO₂]⁺. All of the compounds except N-(2 hydroxyethyl)-N-(2′,4′,6′-trinitrophenyl)nitramine nitrate gave an [MH]⁺ ion. The [MH – 45]⁺ ion in the isobutane CI mass spectra of tetryl is also due to [M + 2H ? NO₂]⁺.