1 H and 13C NMR Assignments of 2.3-Diacetylamido-2,3-Dideoxy-D-Glucopyranose

Abstract

Lipid A exhibits thp most important biological attributes of lipopolysaccharide (LPS) of gram-negative bacteria including endotoxicity, adjuvanticity and antitu-mor activity.′ The lipid A backbone, in general, is found to consist of a pyranosidic β 1,6-linked D-glucosamine disaccharide [β-D-Glc_pN-(1→6)-α-D-Glc_pN] phospho-rylated at 1 and 4′ positions and bearing two amide bound and two ester linked hydroxy and/or acyloxy fatty acids.² However, the lipid A moiety of LPS from var-ious strains of the two gram-negative, photosynthetic bacteria, Rhodopseudomonas virtdia and Rhodopseudomonas palustrts, possesses 2,3-diamino-2,3-dideoxy-D-glucose as a constituent sugar. 3 This diamino sugar has been also reported to occur in LPS from several other bacterial specie^4.5 Recently we found that the lipid X of Brucella abortus contains p(1→6)-linked 2,3-diamino-2,3-dideoxy-D- glucopyranose disaccharide moiety with a phosphate group at the 4′ position and amide bound acyloxy and hydroxy fatty acids.⁶     

1H and 13C NMR spectra of N-vinylpyrroles

The position of the substituants in 2, 3-dialkyl-1-vinylpyrroles and 7-methyl-1 vinyl-4,5,6,7-tetrahydroindole was established on the basis of the ¹H and ¹³C NMR spectra. It was found that the S-trans conformation of the N-vinyl group is preferred. It is shown that the condensation of ketoximes with acetylene proceeds through the formation of free pyrroles and that vinyl oximes are not intermediates in the condensation.     

1H and 13C NMR spectra of N-substituted morpholines

(1)H and (13)C NMR data for N-substituted morpholines 1-20 were measured using 1D (DEPT, 1D NOE difference) and 2D NMR spectroscopic methods including (1)H-(1)H COSY, long-range (1)H-(1)H COSY, NOESY, gHMBC and gHMQC experiments. At room temperature the (1)H NMR spectra of protonated compounds 2 and 9 show the chair conformation for the morpholine ring. Spin-spin coupling constants were deduced from the resolution-enhanced proton spectra.     

1H and13C NMR spectra of polycyclic compounds

Using 2D¹H and¹³C correlation NMR spectroscopy, all signals in the¹H and¹³C NMR spectra of five stereoisomeric bicyclo[2.2.1]heptadiene trimers, decacyclo[9.9.1.0^2.10.0^3.8.0^4.6.0^5.9.0^12.20.0^13.18.0^14.16.0^15.19]heneicosanes, obtained by Pd-catalyzed codimerization of norbornadiene dimer with quadricyclane followed by homocyclotrimerization of the latter were assigned unambiguously. Independent stereochemical identification of the trimers was performed using data on the nuclear Overhauser effect.     

1H and 13C NMR spectra of benzyl compounds

Proton and carbon-13 spectra of benzyl compounds of the general formula (C₆H₅CH₂)_nX with a large variety of X substituents have been measured. While a linear relationship between the CH₂ chemical shift and the substituent electronegativity was found both for ¹H and ¹³C, large deviations from linearity were observed for transition metals such as titanium and zirconium. These later results are correlated with the X-ray studies of the latter compounds.     

1H and13C NMR spectra of C- and N-substituted oxazolidines

An interrelationship between the structure of oxazolidines and the character of their¹H and¹³C NMR spectra was ascertained, and the most characteristic signals of the individual groups, which make it possible to establish the structure of the investigated compounds, were found.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 7, pp. 900–903, July, 1982.     

Characterisation of the 1H and 13C NMR spectra of methylcitric acid

Methylcitric acid (MCA) was synthesised in Reformatsky reaction (2RS, 3RS stereoisomers) and in the nucleophilic addition (2RS, 3SR stereoisomers). The stereoselectivity of these reactions was analysed. (1)H and (13)C NMR spectra of diastereoisomers of methylcitric acid were recorded and interpreted. The values of (1)H chemical shifts and (1)H-(1)H coupling constants were analysed. Proton-decoupled high-resolution (13)C NMR spectra of MCA diastereoisomers were measured in a series of dilute water solutions of various acidities. These data may provide a basis for unequivocal determination of the presence of MCA in the urine samples of patients' suffering from propionic acidemia, methylmalonic aciduria, or holocarboxylase synthetase deficiency. NMR spectroscopy enables determination of MCA diastereoisomers in body fluids and can be a complementary and useful diagnostic tool.     

1H and 13C NMR spectra of Strychnos alkaloids: Selected NMR updates

The PBE0/pcSseg-2//pcseg-2 calculations of ¹H and ¹³C NMR chemical shifts were performed for a classical series of 12 Strychnos alkaloids (except for the earlier studied parent strychnine), namely akuammicine, isostrychnine, rosibiline, tsilanine, spermostrychnine, diaboline, cyclostrychnine, henningsamide, strychnosilidine, strychnobrasiline, holstiine, and icajine. It was found that the calculated ¹H and ¹³C NMR chemical shifts show markedly good correlations with available experimental data, as characterized by a mean absolute error of 0.22 ppm for the range of 8 ppm for protons and 1.97 ppm for the range of 180 ppm for carbons. Complementarily, the present results provide essential NMR update and fill a gap in the NMR data of this distinguished group of vitally important natural products.     

Studies in sulphur heterocyles. 2—The 13C NMR spectra of thienocoumarins

¹³C NMR spectra of 3- substituted thieno[2,3-h][1]benzopyran-2-ones and 8-substituted thieno[3,2-f]-[1]benzopyran-7-ones are reported and the substituent dependence of certain ¹³C chemical shifts is noted.     

1H and 13C NMR spectra of condensed benzimidazole and imidazobenzodiazepines

Benzimidazoles are heterocyclic compounds that have awakened great interest during the last few years because of their proven biological activity as antiviral, antimicrobial, and antitumoral agents. For this reason, the development of a systematic NMR study of condensed benzimidazole compounds constitutes a significant tool in understanding the molecular dynamics and the structural parameters that govern their behavior. The ¹H and ¹³C NMR spectra of new imidazobenzodiazepines were investigated. Based on the study of NMR chemical shifts, we discuss the environmental effect of the nucleus ¹³C. The correlation ¹H–¹³C proved to be a useful method for distinguishing the assignment of carbon.     

13C and1H NMR spectra of spiropiperidine alkaloids of Nitraria

A detailed interpretation is given of the¹³C and¹H NMR spectroscopy of the spiropiperidine alkaloids of the nitramine group, and the results are generalized. The assignment has been made of the carbon-13 resonance lines in the spectra of five natural compounds. A dependence of the parameters on the spatial structures of the compounds of this series has been found. The overall PMR spectra of seven natural alkaloids and some of their derivatives are discussed. The conformations of acyl derivatives have been established.Institute of the Chemistry of Plant Substances, Academy of Sciences of the Uzbek SSR, Tashkent. Translated from Khimiya Prirodnykh Soedinenii, No. 1, pp. 82–91, January–February, 1988.     

1H and13C NMR spectra of 1,5-disubstituted 1,3,4-oxadiazoles

The¹H and¹³C NMR spectra of 2, 5-disubstituted 1,3,4-oxadiazoles with aliphatic, aromatic, and hetero-aromatic substituents have been described and interpreted. The electronic effect of the 1,3,4-oxadiazole group as a benzene ring substituent was evaluated using¹³C NMR spectroscopy.N. D. Zelinskii Institute of Organic Chemistry, Russian Academy of Sciences, 117913 Moscow. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 6, pp. 834–842, June, 1994. Original article submitted April 8, 1994.     

1H, 13C and 15N NMR spectra of ciprofloxacin

1H NMR assignment, including the values of delta(H) and J(H,H) for the cyclopropane moiety, and 13C NMR and 15N NMR spectral data for ciprofloxacin are presented.     

Analysis of the 1H and 13C NMR spectra of bicyclo[6.2.1]undecane ring systems

A detailed NMR analysis with full assignment of the ¹H and ¹³C spectral data for two polycyclic compounds is described. These compounds are derivatives of the product obtained from the pericyclic reaction between cyclopentadiene and tropone. Peculiar intriguing conformational features of these molecules are discussed. Copyright © 2003 John Wiley & Sons, Ltd.     

Computer methods of structure elucidation by1H and13C NMR spectra using factographic databanks

Computer methods have been developed for structure elucidation by ¹ H and ¹³ C NMR spectra using factographic databanks containing spectral and structural data of many organic compounds (44,000 for ¹ H NMR and 27,000 for ¹³ C NMR). Information about the structure of compounds under study is obtained from the analysis of reference structures whose spectra are the best matches of the query spectra. This procedure identifies linked fragments composed of the nodes assigned to signals of the query spectrum when comparing it with reference spectra, and of inactive nodes separated from the former by one bond at most. Using many examples, it has been shown that this approach allows one to determine sufficiently large structural fragments of unknowns both by ¹ H and ¹³ C NMR spectra. The most reliable structures are obtained from the combined analysis of ¹ H and ¹³ C NMR spectral search results. Thus the relative occurrences of correct fragments among the n-first (n=1, 3, 5) fragments of the ranked list of candidates, output to the user, are 80, 93, and 96%, respectively.Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 34, No. 3, pp. 51–60, May–June 1993.Translated by L. Smolina     

1H and13C NMR spectra and structure of 2,3,4-trisubstituted sulfolanes

Conclusions The¹H and¹³C NMR spectra were studied for 2,3,4-trisubstituted sulfolanes and the isomerism of these compounds was determined, The use of chemical shift information is more convenient to determine the isomerism of polysubstituted cyclic compounds by PMR spectroscopy, while use of the direct carbon-proton coupling constants is more convenient for this problem when employing¹³C NMR spectroscopy.Deceased.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 11, pp. 2498–2501, November 1984.     

Complete assignments of the 1H and 13C NMR spectra of 15 limonoids

Unambiguous and complete assignments of ¹H and ¹³C NMR chemical shifts for 15 limonoids, eight of them found in natural sources and seven other synthetic derivatives, are presented. The assignments are based on 2D shift‐correlated [¹H,¹H‐COSY, ¹H,¹³C‐gHSQC‐¹J(C,H), ¹H,¹³C‐gHMBC‐ⁿJ(C,H) (n = 2 and 3)] and NOE experiments. Copyright © 2003 John Wiley & Sons, Ltd.