Application of low energy CID in the determination of structures of [M – halogen]+ ions obtained from diethyl halosuccinates under electron impact

Low energy collision induced dissociation (CID) spectra indicate that m/z 173 ions formed by the loss of a halogen atom from diethyl chloro- and bromo-succinate under electron impact are mixtures of O-protonated diethyl maleate (>90%) and fumarate (<10 %). Hydrogen migration precedes the C-halogen bond cleavage in these cases. The low energy CID spectrum of the m/z 173 [M? I]⁺ ion obtained from diethyl iodosuccinate shows that only a small fraction of the [M? I]⁺ ions are the O-protonated species formed by hydrogen migration. The results of this study demonstrate the potential of low energy CID in the determination of structure (including configuration) of gas phase ions.     

Mass spectra of halogenated esters: 8. Methyl esters of 2,3-dichloro-, bromochloro- and dibromopropenoic acids

The mass spectral fragmentation of methyl esters of E and Z isomers of 2,3-dichloro-, 2-bromo-3-chloro-, 3-bromo-2-chIoro- and 2,3-dibromopropenoic acids have been investigated. The M^+˙ peak is shown with all isomers, the [M ? OCH₃]⁺, [M ? X]⁺, [M ? OCH₃ ? CO]⁺, [M ? OCH₃ ? CO ? X]^+˙ and [M ? OCH₃ ? CO ? X ? X]⁺ ions constituting abundant peaks in all spectra. The results, particularly from the bromochloro isomers, show that a halogen atom is eliminated from the 3- rather than the 2- position and from the Z rather than the E isomer. Bromine as a bulky atom is preferentially lost.     

Translational energy release and stereochemistry of steroids. XI—Determination of the configuration of α,β-unsaturated 3-keto steroid alcohols with the hydroxyl group in rings C and D

The elimination of water from metastable molecular ions of epimeric hydroxy steroids of the Δ⁴-3-keto series containing a hydroxyl group in the conformationally rigid rings C and D has been studied. The measurement of translational energy released during the loss of water and collision-induced decomposition (CID) mass-analysed ion kinetic energy (MIKE) spectrometry were the techniques used. It was found that it is possible to determine the configuration of the hydroxy steroids of this series on the basis of the CID MIKE spectra of [M ? H₂O]^+˙ ions formed by dehydration of metastable molecular ions in the first field-free region of a reversed geometry double-focusing mass spectrometer.     

Formation of aniline-like ions by electron-impact-induced elimination of CO from formanilide

The metastable peak intensity ratios for elimination of HNC vs DNC from the [M ? CO]⁺· ion of deuterium labelled analogues of formanilide show that the formyl hydrogen atom migrates to nitrogen prior to or during CO expulsion to form a [C₆H₇N]⁺· ion of aniline-like structure. An examination of metastable peaks does not allow similar conclusions to be reached for methyl substituted formanilides. Low abundance [C₆H₆O]_+· ions are formed by HNC elimination from the formanilide molecular ion in a reaction where three covalent bonds to the formyl carbon are broken.     

The ortho effect in the mass spectra of ortho/para isomers of bisphenol a derivatives and related compounds

New examples of the ortho effect in bisphenol A derivatives including interaction of the hydrogen of the ortho-hydroxy group with the neighbouring aromatic ring have been observed. The characteristic ions [M ? PhOH]^+middot; (m/z = 134) and [M ? CH₃ ? PhOH]⁺ (m/z = 119) were shown to form through the hydrogen transfer from hydroxy and isopropyl groups, respectively. The spectra of cyclic derivatives having ortho-hydroxy functions show [M ? 43]⁺, [M ? C₈H₉O]⁺, m/z = 147, m/z = 135 and [M ? C₉H₁₀O]⁺ ions. The proposed mechanims of the corresponding transformations were supported by mass spectra of deuterated analogues, methyl and trimethyl silyl ethers.     

Behaviour of isomeric methyl ethyl and ethyl methyl halosuccinates under electron impact. Elimination of a halogen atom by a multi-step mechanism

The electron impact mass spectra of isomeric methyl ethyl and ethyl methyl halosuccinates (X = Cl and Br) are surprisingly different. Only the isomers with the ethyl group remote from the halogen give rise to [M - X]⁺ ions. A low-energy collision-induced dissociation study of deuterium-labelled analogues of the former isomers indicates that the [M - X]⁺ ions are mixtures of protonated methyl ethyl maleate (major component, > 85%) and fumarate, and the loss of the halogen atom is a multi-step process including at least two specific hydrogen transfers. Migration of a β-hydrogen atom to the carbonyl oxygen within the ethoxycarbouyl group produces a primary radical site in a distonic intermediate which, by subsequent abstraction of a hydrogen atom from C(3), triggers the ejection of X from C(2) with concomitant double bond formation. Whereas in the other isomer an [M - X]⁺ ion is absent or negligible, a characteristic double loss of C₂H₄ and CO₂ is observed.     

The effect of configuration of gas phase protonated ethenedicarboxylates on their low energy collision induced dissociation behaviour

Low energy collision induced dissociation (CID) spectra were measured by a triple stage quadrupole mass spectrometer for the [MH]⁺ ions of diethyl and dimethyl esters of maleic, fumaric, citraconic and mesaconic acids. A very high degree of stereospecificity was observed for the geometrically isomeric diethyl esters. The cis esters give rise to very abundant [MH? EtOH]⁺ and [MH? EtOH? C₂H₄]⁺ ions, while the trans isomers exhibit very abundant [MH? C₂H₄]⁺ and [MH? 2 C₂H₄]⁺ ions. The highly stereospecific processes indicate that the double bond configuration is retained in the protonated species under the conditions of the experiment.     

A fast atom bombardment and field ionization/field desorption study of some isomeric unsaturated dicarboxylic acids

Geometrically isomeric dicarboxylic acids, such as maleic and fumaric acid and their methyl homologues, and the isomeric phthalic acids, have been investigated using fast atom bombardment, field ionization and field desorption mass spectrometry. The most intense peak in the positive ion fast atom bombardment spectra corresponds with the [M + H]⁺ ion. This ion, when derived from the E -acids, tragments either by successive loss of water and carbon monoxide or by elimination of carbon dioxide. In the case of the Z -acids only elimination of water from the [M + H]⁺ ions is observed to occur to a significant extent. The same is true for the [M + H]⁺ ions of the isomeric phthalic acids, that is the [M + H] ions derived from iso- and terephthalic acid exhibit more fragmentation than those of phthalic acid. All these acids undergo much less fragmentation upon field ionization, where not only abundant [M + H]⁺ ions, but also abundant [M]^+· ions, are observed. Upon field desorption only the [M + H]⁺ and [M + Na]⁺ ions are observed under the measuring conditions. Negative ion fast atom bombardment spectra of the acids mentioned have also been recorded. In addition to the most abundant [M? H]^? ions relatively intense peaks are observed, which correspond with the [M]^?˙ ions. The fragmentations observed for these ions appear to be quite different from those reported in an earlier electron impact study and in a recent atmospheric pressure ionization investigation.     

Highly specific fragmentation processes of isomeric mixed esters of phenylsuccinic acid under electron impact

Isomeric mixed dialkyl phenylsuccinates, PhCH(COOR)CH₂COOR′, undergo a highly specific elimination of ROH under electron impact. A deuterium-labelling study showed that the hydrogen atom from the benzylic position 2 is abstracted in this process. These results suggest the occurrence of a ‘hidden’ hydrogen migration of the benzylic hydrogen atom to the carbonylic oxygen of the remote ester group, followed by the elimination of ROH from the adjacent ester group with the involvement of that hydrogen. Alkoxyl group migrations resulting in the formation of [PhCH?OR]⁺ and [PhCH?OR′]⁺ ions are less specific, although the migration of the remote R′O˙ is significantly preferred in all the pairs of isomers examined. Mechanisms are suggested for the formation of the two ions.     

Stereospecific alcohol elimination from dialkyl mesaconates under electron impact: Another example of a hidden hydrogen transfer

Under electron impact dimethyl and diethyl mesaconates give rise to abundant [M ? MeOH]⁺ and [M ? EtOH]⁺ ions, respectively. The geometrically isomeric citraconates yield [M ? MeO]⁺ and [M ? EtO]⁺ ions. Mixed methyl ethyl mesaconates eliminate both methanol and ethanol. These findings, together with the results of a deuterium labelling study, indicate that the elimination of alcohol from the molecular ions of the mesaconates is partially preceded by a hidden hydrogen transfer step.     

Mechanism of stereospecific alcohol elimination from cyclohexane trans-1,3-dicarboxylates under electron impact ionization

Diesters of cyclohexane trans-1,3-dicarboxylic acid give rise to major [M ? ROH]^+·. ions under electron impact ionization. A mass spectral study of the isomeric mixed methyl ethyl esters of the diacid, substituted by a methyl group at position 1 and deuterium labelled at position 3, indicates a stepwise mechanism for this alcohol elimination; the 3-hydrogen (or deuterium) is transferred to the carbonyl of the 1-ester group in the initial step. Subsequent migration of that hydrogen (or deuterium) to the alkoxyl of position 3 results in the highly site- and stereospecific alcohol elimination. CID spectra of the [M ? ROH]^+. ions obtained from the stereoisomeric diesters clearly show that they have different structures (or are different mixtures of structures).     

Elimination reactions of ions in the gas phase. IV—Comparative investigation of water elimination in odd and even electron hydroxyl cations of 6-undecanol

Reactivity differences between odd ([M]⁺) and even electron ions (α-cleavage product) were studied by comparing water elimination mechanisms in 6-undecanol. The compounds specifically labelled with deuterium in positions 6, 5 + 7, 4 + 8 and 3 + 9 were made, and a detailed investigation of tghe metastable ion transitions carried out. A highly specific 1,4 elimination of water without preceding intramolecular hydrogen exchange occurs from [M]⁺, but equal amounts of 1,3 and 1,4 elimination of water preceded by specific hydrogen exchange between -OH and the hydrocarbon chain occurs from the α-cleavage ion [M – C₅H₁₁]⁺ . To make such distinctions a thorough examination of metastable ions is essential.     

Ion-molecule reactions in the gas phase. part XXII. Reactivity of the cis- and trans-indanediols with dimethyl ether ions

Specific reactivity of cis- and trans-indanediols has been investigated under dimethyl ether (DME) chemical ionization conditions. Several unusual species, such as [M + 29]⁺ and [M + 27]⁺ ions, are produced in high yield. From DME pressure variations and tandem mass spectrometry experiments (low-energy collisions with Ar and NH₃) including some labeled compounds, it appears that [M + 29]⁺ ions are generated by nucleophilic substitution according to a S_Ni pathway from the proton bound[M + DMEH]⁺ adduct ion. On the other hand, [M + 27]⁺ ions are produced from the covalent [M + DME ? H]⁺ adduct ions via a stepwise process inducing a water loss. This latter dehydration occurs from the adducts prepared by [DME ? H]⁺ attachment to the homobenzylic hydroxy site, which allows internal proton transfer from the charged position to the benzylic hydroxy group, promotingthe loss of water. In addition, trans indanediol labeled with ¹⁸O has been used to obtain evidence for the regioselectivity of both water-loss mechanisms from the benzylic site.     

Electron impact mass spectra of polycyclic aromatic compounds with several types of pyridino- and benzobenzanthrone skeletons

Electron impact mass spectra were measured for five isomers of pyridinobenzanthrones and three isomers of benzobenzanthrones. The fragmentation pattern and intensity of M²⁺, [M – H]⁺, [M – CO]ⁱ⁺, [M – CO – H(or 2H)]ⁱ⁺ and [M – CO – HCN]ⁱ⁺ (i = 1, 2) ions indicated remarkable differences and very interesting features according to the isomers with or without nitrogen and condensation positions of a pyridino or benzo ring to the benzanthrone skeleton. Further, the competition of decompositions through [M – H]⁺, [M – CO]^+˙ or [M – HCN]^+˙ ions was confirmed by the observation of metastable ions and the appearance energies of fragment ions. Interesting observations from these results were expulsion of an H atom in close proximity to the area around an O?C group, a weak bonding interaction between sp² C? H and an O?C group, inducing specific hydrogen rearrangement, and characteristic charge localization on heteroatoms.     

High resolution mass spectrometry—V: Cyclic esters of aliphatic α-hydroxy acids

The main fragmentation sequences of glycollide and its homologues are initiated by fission of a CO? O bond, leading to the formation of fragment ions of low, m/e, such as [R¹CO]⁺ and [CR¹R²CCO]⁺. When a hydrogen atom is present on a ring carbon atom, 1,3 hydrogen migration occurs to produce [CHR²OH]⁺. In case where a ring carbon atom carries an alkylchain ? C₂H₅, a McLafferty rearrangement occurs with the adjacent carbonyl group. When both ring carbon atoms are dimethyl substituted, a 1,4 hydrogen migration must be invoked to account for the observed fragmentation sequence.     

A mass spectrometric study of halogenated beryllium μ4-oxohexa-μ-acetates

The electron impact mass spectra of Be₄O(CHal₃CO₂)₆ (Hal = F, Cl) are reported. The compounds give two series of fragment ions, [Be₄OL_x]⁺ and [Be₄OL₊]⁺, where L is an intact ligand or its fragmentation product. The major ligand dissociation path is the elimination of CHal₂CO₂ with halogen transfer to the metal. Other processes of importance are the loss of acid anhydride fragments, CF₂ with fluorine shift to the carboxyl group carbon atom, and halogens. Trinuclear ions also undergo decarboxylation, e.g. to give [Be₂O(CHal₃CO₂)₂(CHal₃)]⁺. Both spectra contain comparatively intense peaks of double-charged ions. The fragmentation patterns are rationalized by stereochemical considerations.     

Gas-Phase Fragmentation of [M + nH + OH]<Superscript>n•+</Superscript> Ions Formed from Peptides Containing Intra-Molecular Disulfide Bonds

In this study, we systematically investigated gas-phase fragmentation behavior of [M + nH + OH]^n•+ ions formed from peptides containing intra-molecular disulfide bond. Backbone fragmentation and radical initiated neutral losses were observed as the two competing processes upon low energy collision-induced dissociation (CID). Their relative contribution was found to be affected by the charge state (n) of [M + nH + OH]^n•+ ions and the means for activation, i.e., beam-type CID or ion trap CID. Radical initiated neutral losses were promoted in ion-trap CID and for lower charge states where mobile protons were limited. Beam-type CID and dissociation of higher charge states of [M + nH + OH]^n•+ ions generally gave abundant backbone fragmentation, which was highly desirable for characterizing peptides containing disulfide bonds. The amount of sequence information obtained from CID of [M + nH + OH]^n•+ ions was compared with that from CID of disulfide bond reduced peptides. For the 11 peptides studied herein, similar extent of sequence information was obtained from these two methods.     

Ortho effects in organic molecules on electron impact. Part 16. Novel oxygen transfers from the nitro group to acetylenic carbons in 2-nitrodiphenylacetylenes

Oxygen transfers to both acetylene carbons are noticed in parallel fragmentation pathways during the electron impact induced decompositions of 2-nitrodiphenylacetylene. The oxygen transfer to β-acetylenic carbon leads to the most abundant ion corresponding to benzoyl cation while transfer to the α-acetylenic carbon affords less intense fragments corresponding to [M? OH]⁺, [M? CO]^{+ ˙} and [M? CO₂]^{+ ˙}. The proposed fragmentation pathways and ion structures are supported by high-resolution data, linked-scan spectra and chemical substitution.     

Ring expansion and hydrogen scrambling in the molecular ion of 3-methylthiophene

The ratio [M ? D]/{[M-D] + [M ? H]} in the 70 eV mass spectra of six deuterated 3-methylthiophenes has been determined. From these values the mole fractions of the molecular ions that lose hydrogen atoms specifically from the various positions of the molecule were calculated, as well as the mole fraction in which the hydrogen atoms are fully scrambled before hydrogen elimination. It appears that hydrogen atoms are mainly lost from a fully scrambled [C₅H₆S]⁺· ion and from the α-position of the original molecular ion. A deuterium isotope effect of 1·60 to 1·72 was calculated for the hydrogen elimination. The reaction was also studied at low electron energies. In order to determine the degree of scrambling in the [C₅H₅S]⁺ ions, some decomposition reactions of this ion were investigated.     

Ion-molecule reactions in alkyl cyanides: Identification of reactive hydrogen in precursor ions

The relative abundance of [M + H]⁺ ions in the spectra of different nitriles depends on the nature of the nitrile. A new method for the identification of ion-molecule reactions has been applied, by determining the [M + D]⁺ ion intensity with respect to the [M + H]+ ion intensity in the spectra of partially deuteriated alkyl cyanides. This intensity ratio is correlated with the hydrogen-deuterium content of the suspected primary ions. In addition not only the reacting primary ions, but also the reactive hydrogen atom in the primary ion could be indicated. There is clear evidence that the proton attached to the nitrogen atom in the H₂C?C?N⁺˙? H rearrangement ion is transferred to the nitrile molecule.