Adsorption of tetramethylsilane molecules on the basal face of graphite

The thermodynamic adsorption characteristics of tetramethylsilane (TMS) molecules on graphitized carbon black (GCB) were for the first time determined experimentally and by molecular statistics methods. The potential function parameters of pair molecular interactions (φ(r)) between Si and C atoms on the basal face of graphite were calculated in the atom-atom approximation of the semiempirical molecular-statistical theory of adsorption. The contributions of Si and C atoms to thermodynamic adsorption characteristics are compared for the example of nonspecific adsorption of TMS and isostructural neopentane molecules on the flat surface of GCB.     

Structure of solid monolayers and multilayers of n -hexane on graphite

We present all-atom molecular dynamics simulations ofn-hexane on the basal plane of graphite at monolayer and multilayer coverages. In keeping with experimental data, we find the presence of ordered adsorbed layers both at single monolayer coverage and when the adsorbed layer coexists with excess liquid adsorbate. Using a simulation method that does not impose any particular periodicity on the adsorbed layer, we quantitatively compare our results to the results of neutron diffraction experiments and find a structural transition from a uniaxially incommensurate lattice to a fully commensurate structure on increasing the coverage from a monolayer to a multilayer. The zig-zag backbone planes of all the alkane molecules lie parallel to the graphite surface at the multilayer coverage, while a few molecules are observed to attain the perpendicular orientation at monolayer coverage. Dedicated to Professor C N R Rao on his 70th birthday     

Novel technologies for the formation of 2-D and 3-D droplet interface bilayer networks

Droplet interface bilayer (DIB) networks have vast potential in the field of membrane biophysics, synthetic biology, and functional bio-electronics. However a technological bottleneck exists in network fabrication: existing methods are limited in terms of their automation, throughput, versatility, and ability to form well-defined 3-D networks. We have developed a series of novel and low-cost methodologies which address these limitations. The first involves building DIB networks around the contours of a microfluidic chip. The second uses flow rate and droplet size control to influence droplet packing geometries within a microfluidic chamber. The latter method enables the controlled formation of various 3-D network arrays consisting of thousands of interconnected symmetric and asymmetric lipid bilayers for the first time. Both approaches allow individual droplet position and composition to be controlled, paving the way for complex on-chip functional network synthesis.     

Structure and dynamics of a fluid phase bilayer on a solid support as observed by a molecular dynamics computer simulation

Simulations of a 1-palmitoyl-2-oleoyl- sn-glycero-3-phosphocholine lipid bilayer interacting with a solid surface of hydroxylated nanoporous amorphous silica have been carried out over a range of lipid-solid substrate distances. The porous solid surface allowed the water layer to dynamically adjust its thickness, maintaining equal pressures above and below the membrane bilayer. Qualitative estimates of the force between the surfaces leads to an estimated lipid-silicon distance in very good agreement with the results of neutron scattering experiments. Detailed analysis of the simulation at the separation suggested by experiment shows that for this type of solid support the water layer between surfaces is very narrow, consisting only of bound waters hydrating the lipid head groups and hydrophilic silica surface. The reduced hydration, however, has only minor effects on the head group hydration, the orientation of water molecules at the interface, and the membrane dipole potential. Whereas these structural properties were not sensitive to the presence of the solid substrate, the calculated diffusion coefficient for translation of the lipid molecules was altered significantly by the silica surface.     

O- ESD from O2 monolayers physisorbed on graphite: a surface mediated mechanism

We report on electron-stimulated desorption (ESD) of O^- ions from δ phase O₂ physisorbed on graphite. A production of energetic O^- ions is observed with an onset at about 13 eV. The measured onset of the yield of O⁺ ions is however found at about 20 eV. O^- ions yields obtained at different ion kinetic energies and kinetic energy (KE) measurements lead us to postulate a substrate mediated ESD mechanism following direct electronic excitation of physisorbed O₂.     

Distribution of coexisting solid and fluid phases alters the kinetics of collapse from phospholipid monolayers

To determine how coexistence of liquid-expanded (LE) and tilted-condensed (TC) phases in phospholipid monolayers affects collapse from the air/water interface, we studied binary films containing dioleoyl phosphatidylcholine-dipalmitoyl phosphatidylcholine (DPPC) mixtures between 10 and 100% DPPC. Previously published results established that this range of compositions represents the LE-TC coexistence region at the equilibrium spreading pressure of 47 mN/m. When held at 49.5 mN/m on a captive bubble, the extent of total collapse fit with the LE area predicted by the phase diagram. The kinetics of collapse, however, when normalized for changes in the LE area, slowed with increasing mole fraction of DPPC. Surface area expressed as stretched exponential functions of time yielded an Avrami exponent that decreased from 1 for the homogeneously LE film to 0.3 for DPPC > or = 70%. Microscopic studies showed that the largest changes in kinetics occurred when either alterations of the initial composition or the process of collapse induced the films to cross the percolation threshold, so that the LE phase became divided into isolated domains. Our results show that although coexisting solid and fluid phases collapse to extents that are independent, the kinetics of collapse, corrected for differences in LE area, depend on the distribution of the two phases.     

Photoresponsive monolayers on water and solid surfaces

Organic photochromic units and molecules can be regarded as light-driven nano molecular machines. Once such molecules are aligned at a surface, the supramolecular organization provides an efficient macroscopic mechanical response in a collective way. Amphiphilic polymers having an azobenzene (Az) side chain are the favorable materials for observation of such effects since they show marked photomechanical response with essentially full reversibility. An in situ Brewster angle microscopic observation showed marked morphological and rheological photoinduced changes in the molecular films. Moreover, we have newly found that the identical photosensitive molecular film transferred on to a solid mica surface shows large morphological changes under highly humid conditions as proven by atomic force microscopy (AFM). It is supposed that the molecular film is driven in the same mechanism both on water and water-adsorbed mica surfaces. These microscopic observations provide new insights of the photomechanical response in photochromic monolayers.     

Bioluminescence of monolayers of firefly luciferase immobilized on graphite

We report on the immobilization of the firefly protein luciferase on the hydrophobic surface of graphite. Observation by liquid-phase atomic force microscopy of islands with a height consistent with the size of a single molecule confirmed that the protein was contained within a monomolecular layer. The enzyme activity was assayed by single-photon counting of the bioluminescence, which is the catalytic product of luciferase. Attachment to the surface modified the efficiency of the enzyme, but the introduction of the substrates luciferin and ATP resulted in the reactivation of the enzyme. The functionalized graphite surface was employed as a cathode in a bioelectrochemical cell. This demonstrated that the electric field caused a substantial loss of enzyme catalytic activity.     

Tethered bilayer lipid membranes on mixed self-assembled monolayers of a novel anchoring thiol: impact of the anchoring thiol density on bilayer formation

Tethered bilayer lipid membranes (tBLMs) are designed on mixed self-assembled monolayers (SAMs) of a novel synthetic anchoring thiol, 2,3-di-o-palmitoylglycerol-1-tetraethylene glycol mercaptopropanoic acid ester (TEG-DP), and a new short dilution thiol molecule, tetraethylene glycol mercaptopropanoic acid ester (TEG). tBLM formation was accomplished by self-directed fusion of small unilamellar vesicles of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine. The influence of the dilution of the anchoring thiol molecule in the SAM on the vesicle fusion process and on the properties of the resulting tBLMs is studied. It is observed by quartz crystal microbalance that vesicle fusion is a one-step process for a pure TEG-DP SAM as well as for mixed SAMs containing a high concentration of the anchoring thiol. However, upon dilution of the anchoring thiol to moderate concentrations, this process is decelerated and possibly follows a pathway different from that observed on a pure TEG-DP SAM. Electrochemical impedance spectroscopy is used to qualitatively correlate the composition of the SAM to the electrical properties of the tBLM. In this paper we also delineate the necessity of a critical concentration of this anchoring TEG-DP thiol as a requisite for inducing the fusion of vesicles to form a tBLM.     

The crystalline structures of carboxylic acid monolayers adsorbed on graphite

X-ray and neutron diffraction have been used to investigate the formation of solid crystalline monolayers of all of the linear carboxylic acids from C(6) to C(14) at submonolayer coverage and from C(8) to C(14) at multilayer coverages, and to characterize their structures. X-rays and neutrons highlight different aspects of the monolayer structures, and their combination is therefore important in structural determination. For all of the acids with an odd number of carbon atoms, the unit cell is rectangular of plane group pgg containing four molecules. The members of the homologous series with an even number of carbon atoms have an oblique unit cell with two molecules per unit cell and plane group p2. This odd-even variation in crystal structure provides an explanation for the odd-even variation observed in monolayer melting points and mixing behavior. In all cases, the molecules are arranged in strongly hydrogen-bonded dimers with their extended axes parallel to the surface and the plane of the carbon skeleton essentially parallel to the graphite surface. The monolayer crystal structures have unit cell dimensions similar to certain close-packed planes of the bulk crystals, but the molecular arrangements are different. There is a 1-3% compression on increasing the coverage over a monolayer.     

Thermodynamic analysis of ordered and disordered monolayer of argon adsorption on graphite

We presented a detailed thermodynamic analysis of argon adsorption on a graphitized carbon black with a kinetic Monte Carlo scheme. In this study, we particularly paid attention to the formation of a hexagonal two-dimensional molecular layer on a graphite surface and discuss conditions of its stability and thermodynamic properties of the adsorbed phase as a function of loading. It is found that the simulation results are substantially affected by the dimensions of the simulation box when the monolayer forms a hexagonal ordered structure. This is due to the fact that the lattice constant is constrained by the dimensions of the surface. To circumvent this, we presented a thermodynamic technique, which allows for the variation of the box size as a function of loading, to determine the "intrinsic" lattice constant (rather than apparent average value because of the fixed dimensions of the simulation box) and the thermodynamic functions for the adsorbed phase: the Helmholtz free energy, the chemical potential, and the surface tension. The tangential and normal pressures as a function of the distance from the surface are also discussed.     

Infrared spectroscopic study of C(2)F(6) monolayers and bilayers on graphite

We report an experimental study of adsorbed films of C(2)F(6) on graphite by using infrared reflection absorption spectroscopy supplemented by ellipsometry. The vibrational C-F stretch modes nu(5) (parallel to the molecular axis) and nu(7) (perpendicular) in the film are strongly blueshifted by dynamic dipole coupling, and these shifts are sensitive to lattice spacing and molecular tilt. The relative strength of the absorption peaks mainly depends on the tilt angle relative to the surface normal. We use the strength data to estimate the tilt angle across the known monolayer phases, information that is difficult to obtain by other techniques. Although only the surface-normal component of the induced dipole moment appreciably couples to the external infrared field, surface-parallel components contribute to the intralayer coupling and hence to the frequency shifts for tilted molecules. Comparison to model calculations for a range of herringbone tilt configurations allows us to draw conclusions regarding the pattern of tilt azimuths. On this basis, we offer a revised interpretation of the origin of the Ising-type ordering transition found by Arndt et al. [Phys. Rev. Lett. 80, 1686 (1998)] in heat capacity measurements. Our phase boundaries for monolayer phases above 80 K are in good agreement with earlier results of the Saarbrucken group. We identify three distinct bilayer phases near saturation in isothermal pressure scans from ellipsometric steps and spectroscopic signatures. In temperature scans, we find evidence for several monolayer phases more dense than the well-established 2 x 2 commensurate phase and for a stable trilayer phase below about 60 K.     

Low-temperature heat capacity of TMS monolayers adsorbed on graphite and MgO+

The heat capacity obtained below 30 K for the tetramethylsilane monolayers, which are adsorbed either on graphite or on the (100) surface of MgO, is analyzed to investigate the vibrational properties. The 2-D Debye temperatures are approximately 60% of the Debye temperature of the bulk solid (γ -phase), reflecting the dimensionality of lattice vibrations. The contributions from the vibrations perpendicular to the surface as well as the librational motions are determined by fitting the experimental heat capacities. All the results are consistent with those obtained from the incoherent inelastic neutron scattering and the molecular dynamics simulation. This revised version was published online in August 2006 with corrections to the Cover Date.     

Condensation of a non-wetting fluid on a solid surface

Theoretical studies of a drop moving under condensation from the surrounding vapor, have been provided. Two cases are considered. In the first, the rate of condensation is large that the drop "moves" because condensation has changed its dimensions. The model provided here shows that the rate of spreading is a constant, proportional to the heat flux and inversely proportional to the macroscopic contact angle. This compares well with available experimental data. The other model where the rate of condensation is small, is taken from existing results and comes close to explaining one set of experimental data. It is based on the use of viscous forces as the primary rate mechanism. Its shortcomings have been discussed.     

Reactive capture of gold nanoparticles by strongly physisorbed monolayers on graphite

Anthracene Diels Alder adducts (DAa) bearing two long side chains (H-(CH₂)₂₂O(CH₂)₆OCH₂-) at the 1- and 5-positions form self-assembled monolayers (SAMs) at the phenyloctane - highly oriented pyrolytic graphite (HOPG) interface. The long DAa side chains promote strong physisorption of the monolayer to HOPG and maintain the monolayer morphology upon rinsing or incubation in ethanol and air-drying of the substrate. Incorporating a carboxylic acid group on the DAa core enables capture of 1-4 nm diameter gold nanoparticles (AuNPs) provided (i) the monolayer containing DAa-carboxylic acids is treated with Cu²⁺ ions and (ii) the organic coating on the AuNP contains carboxylic acids (11-mercaptoundecanoic acid, MUA-AuNP). AuNP capture by the monolayer proceeds with formation of Cu²⁺ - carboxylate coordination complexes. The captured AuNP appear as mono- and multi-layered clusters at high coverage on HOPG. The surface density of the captured AuNPs can be adjusted from AuNP multi-layers to isolated AuNPs by varying incubation times, MUA-AuNP concentration, the number density of carboxylic acids in the monolayer, the number of MUA per AuNP, and post-incubation treatments.     

Electrostatic control of lipid bilayer self-spreading using a nanogap gate on a solid support

We have demonstrated for the first time that the self-spreading of supported lipid bilayers can be controlled by the temporal switching of an electric field applied between nanogap electrodes. To account for this phenomenon, we propose an electrostatic trapping model in which an electric double layer plays an important role. The validity of this mechanism was verified by the dependence of self-spreading on the nanogap width and the ionic concentration of the electrolyte. Our results provide a promising tool for the temporal and spatial control of lipid bilayer formation for nanobio devices.     

Surface-enhanced infrared ellipsometry of self-assembled undecanethiol and dodecanethiol monolayers on disordered gold nanoisland substrates

Infrared spectroscopic ellipsometry (IRSE) is a powerful optical probe of various chemical and physical properties of molecules adsorbed onto solid surfaces. In particular, IRSE can be useful for detecting adsorption-induced changes in the IR spectra of self-assembled monolayers (SAMs), and unlike traditional IR absorption spectroscopies, IRSE provides useful information about the phase of the reflected radiation from the SAMs. However, in the standard IRSE experimental geometry using flat substrates for SAMs, the detectable signal containing these phase data is considerably weaker than the corresponding absorbance data. In our present work, we demonstrate that enhancing the local optical fields at the sample surface through the use of a disordered Au nanoisland substrate can substantially increase both these absorbance and phase signals. We also demonstrate how this surface-enhanced infrared spectroscopic ellipsometry (SEIRSE) can be utilized for straightforward analysis of absorption peak widths, as well as to obtain information about the orientation of the terminal methyl on adsorbed SAMs. As model SAMs for this study, we use undecanethiol (UDT) containing 10 CH(2) units and a terminal CH(3) group, as well as dodecanethiol (DDT) containing 11 CH(2) units with its terminal CH(3) at a different orientation than UDT. We show that surface-enhanced IRSE is sensitive to subtle vibrational signatures of the differently oriented terminal methyls of these two homologous alkanethiol SAMs.     

Immobilization of paracetamol and benzocaine pro-drug derivatives as long-range self-organized monolayers on graphite

We show here by means of scanning tunneling microscopy (STM) at the liquid/solid interface that paracetamol and benzocaine molecules bearing a long aliphatic chain can be immobilized on highly oriented pyrolitic graphite (HOPG) as perfectly ordered two-dimensional domains extending over several hundreds of nanometers. In both cases, high-resolution STM images reveal that compounds 1 and 2 self-assemble into parallel lamellae having a head-to-head arrangement. The paracetamol heads of 1 are in a zigzag position with entangled n-dodecyloxy side chains while benzocaine heads of compound 2 are perfectly aligned as a double row and have their palmitic side chains on either sides of the head alignment. We attribute the very long-range ordering of these two pro-drug derivatives on HOPG to the combined effects of intermolecular H-bonding on one side and Van der Waals interactions between aliphatic side chains and graphite on the other side. The 2D immobilization of pro-drug derivatives via a non-destructive physisorption mechanism could prove to be useful for applications such as drug delivery if it can be realized on a biocompatible substrate.     

Absorption spectra of disordered solid tetracene and pentacene

Absorption spectra of tetracene and pentacene layers prepared by vapor deposition onto cooled substrates were measured as a function of sample formation temperature T_f, evaporation rate and recording temperature. Profile-analysis indicates that the main absorption peak is of gaussian shape. The width varies between 300 cm^?1 and 650 cm^?1, higher values referring to lower formation temperatures and/or higher evaporation rates and reflecting larger fluctuation of the site-energies. Appearance of a second electronic band equivalent to the upper Davydov component in the crystal spectrum indicates presence of short-range order. The low-energy behavior is dominated by a structural defect. No Urbacht-tail is observed. It is concluded that tetracene and pentacene layers represent examples for intermediate structural disorder.