Matrix-assisted laser desorption/ionization-collision induced dissociation of poly(styrene)

Matrix-assisted laser desorption/ionization-collision induced dissociation (MALDI-CID) has been employed for the analysis of poly(styrene) in a tandem hybrid sector-time of flight instrument. Spectra are shown for adducts of poly(styrene) with copper and silver ions. The distributions of fragment ion peaks were found to be consistent from precursor ions containing both metal ions. It is shown how the masses of the end groups of the polymer may be inferred from the mass-to-charge ratios of two of the series of ion peaks that are seen in the MALDI-CID spectra. Mechanisms are proposed for the formation of some of the other series of ion peaks that are observed in the spectra.     

Utilizing matrix-assisted laser desorption/ionization-collision induced dissociation for the generation of structural information from poly(alkyl methacrylate)s

Matrix-assisted laser desorption/ionization-collision induced dissociation (MALDI-CID) has been employed for the analysis of poly(alkyl methacrylate)s in a tandem hybrid sector-time of flight instrument. Spectra are shown for adducts of poly(ethyl methacrylate) and poly(butyl methacrylate) with sodium ions. It is proposed that the masses of the end groups may be inferred from the data for the polymers. Mechanisms are proposed for the formation of some of the series of ion peaks that are observed in the MALDI-CID spectra.     

Ionization and fragmentation of neutral and acidic glycosphingolipids with a Q-TOF mass spectrometer fitted with a MALDI ion source

This paper reports the use of a quadrupole time-of-flight (Q-TOF) mass spectrometer fitted with a matrix-assisted laser desorption/ionization (MALDI) ion source for the analysis of neutral and acidic glycosphingolipids. All compounds gave strong [M + Na]+ ions with 2,5-dihydroxybenzoic acid as the matrix, with no loss of sensitivity with increasing mass as was observed from the corresponding ions produced by electrospray. Neutral glycosphingolipids showed negligible in-source fragmentation but sialylated compounds fragmented by loss of sialic acid. However, these losses were not accompanied by unfocused post-source-decay ions as observed with MALDI-reflectron-TOF instruments. The MS/MS spectra were almost identical to those obtained by electrospray. Fragmentation of all compounds was mainly by glycosidic cleavage to give ions, both with and without the ceramide moiety, which defined the carbohydrate chain sequence. Weak ions which defined the sphingosine chain length and abundant ions, produced by loss of the acyl chain, were present when this chain contained a 2-hydroxy group. The technique was applied to the identification of ceramide-trihexosides present in tissues from mice genetically modified to model one of the glycolipid storage diseases (Fabry disease).     

Mass spectra of chloro-, aminochloro- and ethylaminochloro-s-triazines

The mass spectra of cyanuric chloride and all of the possible amino-and ethylaminochloro-s-triazines have been investigated. The simpler compounds provide evidence for the structures of low mass fragment ions found in the spectra of the more complex derivatives. Fragmentation patterns are presented which account for most of the major ions. These pathways involve either the initial loss of a chlorine atom (important for the simple aminochlorotriazines) or ring cleavage with expulsion of cyanogen chloride (important for cyanuric chloride). The ethyl derivatives undergo cleavage of the side chain prior to either ring cleavage or chlorine expulsion.     

Characteristic fragmentation patterns of the trimethylsilyl and trimethylsilyl-oxime derivatives of various saccharides as obtained by gas chromatography coupled to ion-trap mass spectrometry

The fragmentation patterns of selected glycosidic linkage containing non-reducing (methylmannoside, methylgalactoside, lactitol, sucrose, trehalose, raffinose, erlose, melezitose) and reducing saccharides (maltose, cellobiose, lactose, melibiose, palatinose, primeverose, rutinose) have been compared as their trimethylsilyl and as their trimethylsilyl-oxime derivatives. Fragmentation characteristics of the glycosidic linkage containing trimethylsilyl-oxime derivatives have been investigated at the first time: these spectra are not available in the official libraries (NIST, Wiley). Applying gas chromatography-ion trap mass spectrometry, informative fragments of high masses with high intensities have been obtained. Results confirmed characteristic differences between the simple trimethylsilyl derivative providing non-reducing glycosides and the trimethylsilyl, syn and antioxime species. Fragmentation starts at the glycosidic linkage resulting in the case of the non-reducing di- and trisaccharides in two, identical fragments of ring structure, with the abundant selective fragment ion at m/z=361. In the case of reducing disaccharides fragmentation provides two different moieties: one moiety of ring structure at m/z=361, and one of the open chain trimethylsilyl-oxime moiety with two special fragment ions at m/z=361 and at m/z=538. These fragmentation patterns proved to be independent on the position of the glycosidic linkage. Distribution of the selective fragment ions, obtained from their total ion current elutions, was evaluated on a quantitative basis, expressed in percentages of the total of ions formed. Reproducibility in the formation of these selective fragment ions, depending on their amount to be fragmented, proved to be proper for identification and quantitation purposes, equally. On this basis, in addition to the authentic ones, also two reducing disaccharides (primeverose and rutinose), as authentic compounds not available on the market, were identified and quantified in natural matrices.     

Analysis of oxosteroids by nano-electrospray mass spectrometry of their oximes

A method for the analysis of neutral oxosteroids by electrospray mass spectrometry is described. The oxosteroids are converted into their oximes by treatment with hydroxyammonium chloride in aqueous methanol. Intense peaks corresponding to protonated oxime molecules are observed in nano-electrospray mass spectra. The detection limits for the oximes of progesterone, pregnenolone and dehydroepiandrosterone were 2.5, 5 and 25 pg/microL, respectively, approximately 20 times lower than for the underivatised steroids. The signal intensities were proportional to the concentration of the steroids in the range of 500 to 2.5 pg/microL. Fragmentation by collision-induced dissociation (CID) was studied using oximes of 28 model steroids carrying an oxo group at C-3, C-17 or C-20. Some of the steroid oximes were labelled with deuterium or (15)N. Fragment ions were observed which yielded useful structural information. Upon CID, protonated oximes of 3-oxo-Delta(4)-steroids produced abundant ions by cleavage through the B-ring and by loss of the side chain, while protonated oximes of saturated 3-oxosteroids did not give abundant ions by cleavage through the B-ring. Protonated oximes of 20-oxosteroids unsubstituted at C-21, C-17 or C-16 produced a characteristic ion at m/z 86 containing the side chain, C-16 and C-17. Protonated oximes of steroids containing only a 17-oxo group gave fewer ions of diagnostic value. Coupled with the selective isolation of steroid oximes from a biological matrix this method of derivatisation and CID may be used for the analysis of neutral oxosteroids in biological samples.     

Direct observation of essential DNA dynamics: melting and reformation of the DNA minor groove

The dynamics of bound water and ions present in the minor groove of a dodecamer DNA has been decoupled from that of the long-range twisting/bending of the DNA backbone, using the minor groove binder Hoechst 33258 as a fluorescence reporter in the picosecond-resolved time window. The bound water and ions are essential structural components of the minor groove and are destroyed with the destruction of the minor groove when the dodecamer melts at high temperatures and reforms on subsequent cooling of the melted DNA. The melting and rehybridization of the DNA has been monitored by the changes in secondary structure using circular dichroism (CD) spectroscopy. The change in the relaxation dynamics of the DNA has been studied with picosecond resolution at different temperatures, following the temperature-dependent melting and rehybridization profile of the dodecamer, using time-resolved emission spectra (TRES). At room temperature, the relaxation dynamics of DNA is governed by a 40 ps (30%) and a 12.3 ns (70%) component. The dynamics of bound water and ions present in the minor groove is characterized by the 40 ps component in the relaxation dynamics of the probe bound in the minor groove of the dodecamer DNA. Analyses of the TRES taken at different temperatures show that the contribution of this component decreases and ultimately vanishes with the destruction of the minor groove and reappears again with the reformation of the groove. The dynamical behavior of bound water molecules and ions of a genomic DNA (from salmon testes) at different temperatures is also found to be consistent with that of the dodecamer. The longer component of approximately 10 ns in the DNA dynamics is found to be associated with the long-range bending/twisting of the DNA backbone and the associated counterions. The transition from bound water to free water at the DNA surface, indicative of the change in the hydration number associated with each base pair, has also been ascertained in the case of the genomic DNA at different temperatures by employing densimetric and acoustic techniques.     

Chemical ionisation mass spectra of explosives

The chemical ionisation mass spectra of a number of representative explosives have been obtained using hydrogen as reagent gas. Fragmentation modes of the protonated molecular ions tend to be simple although some rearrangements have been noted. Loss of a radical from an even electron parent ion has been observed. The use of ‘ghost spectra’ for confirmation of the molecular weight of the sample is stressed: these consist of ions of low abundance resulting from reactions between sample ions and sample molecules. Labelling studies were carried out using deuterium as reagent gas.     

Isotope edited product ion assignment by α-N labeling of peptides with [2H3(50%)]2,4-Dinitrofluorobenzene

An isotopic modification of Sanger's method for identifying peptide N-termini has been developed to assist peptide sequencing by tandem mass spectrometry. Tryptic peptides, such as Val-His-Leu-Thr-Pro-Val-Glu-Lys, are derivatized with an equimolar mixture of 2,4-dinitrofluorobenzene and [2H3]2,4-dinitrofluorobenzene. Under optimized derivatization conditions, the alpha-amino group could be derivatized while the epsilon-amine of the lysine side chain and the imidazole of histidine remained underivatized. The alpha-dinitrophenyl modified peptides were characterized by electrospray ionization-tandem mass spectrometry (ESI-MS/MS) and liquid chromatography (LC)-ESI-MS. The [M + H]+ ions showed a doublet pattern with a delta m/z of 3 and the [M + 2H]2+ ions were recognized as doublets with a delta m/z of 1.5. MS/MS was employed where both isotopic [M + 2H]2+ ions were alternately subjected to collision-induced dissociation in the second quadrupole. Fragmentation in the ionization source generated identical product ion patterns that were observed during fragmentation in the second quadrupole. In the product ion mass spectra, the N-terminal a and b ions (no c ion observed) are doublets with a delta m/z of 3 or 1.5, while the C-terminal y and z ions (no x ion observed) are singlets appearing at identical masses. Thus, the product ions containing the N-terminus derivatized with a dinitrophenyl group are unequivocally distinguished from the product ions containing the C-terminus. The dinitrophenyl modification generally enhanced the production of a and b ions without diminishing y and z ion yields.     

Massenspektrometrische Untersuchungen an einigen Halogeniden der 5. Haupt- und Nebengruppe

The mass spectra of fifth group halids and some of their substitution products have been studied. Fragmentation processes, charge distributions as well as relative stabilities of fragment ions and double-charged ions are discussed. Appearance potentials have been measured and discussed, with reference to decomposition reactions and abundance considerations of fragment ions. In some cases polymeric ions were found in mass spectra.     

Lithium and transition metal ions enable low energy collision-induced dissociation of polyglycols in electrospray ionization mass spectrometry

Electrospray ionization tandem mass spectrometry has the potential to be widely used as a tool for polymer structural characterization. However, the backbones or molecular chains of many industrial polymers including functional polyglycols are often difficult to dissociate in tandem mass spectrometers using low energy collision-induced dissociation (CID). We present a method that uses Li+ and transition metal ions such as Ag+ as the cationization reagents for electrospray ionization in an ion trap mass spectrometer. It is shown that lithium and transition metal polyglycol adduct ions can be readily fragmented with low energy CID. Comparative results from different cationization reagents in their abilities of producing both MS spectra and CID spectra are shown. This method opens the possibility of using conventional and readily available low energy CID tandem MS to study polyglycol structures.     

Fragmentation characteristic of glutathione conjugates activated by high-energy collisions

Product ion spectra of fifteen monoglutathione and diglutathione conjugates have been measured using activation by 6000-eV collisions with helium in the third field-free region of a four-sector tandem mass spectrometer of EBEB configuration. Fragmentation patterns in the cation spectra have been analyzed for decompositions of the glutathione moiety that would permit recognition of an unknown as a glutathione conjugate. Five spectra from an earlier study of high-energy collisional activation on a BEEB four-sector instrument have also been included in this analysis. A suite of appropriate ions was found to occur consistently, including ions of m/z 307 comprising the glutathione tripeptide and the complementary ion [MH — 307]⁺ or the ion radical [MH — 306]^+’.     

Effect of metal cationization on the tandem mass spectra of glycosyl dithioacetals

The effect of metal cationization on the tandem mass spectra of glycosyl dithioacetals of glucose, mannose, galactose, rhamnose, arabinose and xylose was studied by electrospray ionization mass spectrometry under ammonium and metal (Li, Na, Ag and Cu) ion cationization conditions. The ammonium-cationized glycosyl dithioacetals fragment by loss of ammonia followed by either two molecules of EtSH or one molecule of EtSH and one molecule of H2O. Lithium cationization leads to additional eliminations such as EtSEt and EtSSEt and C-C cleavages. Elimination of EtSH is not observed under sodium cationization. Silver cationization, on the other hand, leads to additional fragmentations involving the elimination of silver as AgOH and AgSEt. Copper cationization results in adducts where copper has undergone a change of oxidation state from II to I. Li+, Ag+ and Cu+ cationization seem to favour cyclization resulting in elimination of EtSH. However, the mechanisms seem to be differently affected by different metal ions. Li+ and Ag+ cationization appear to be non-specific and favour cyclization involving C2-, C4- and C5-hydroxyl hydrogens, whereas Cu+ cationization seems to favour cyclization involving C4-hydroxyl hydrogen.     

Performances and limits of plasma desorption mass spectrometry in the primary structure determination of proteins.

The resolution, sensitivity, matrix effect, cationization and spectral suppression in plasma desorption mass spectrometry (PD-MS) were investigated in the context of peptide analysis. Excessive cationization may be avoided by the addition of citric acid on the target. The importance of the relative net charge of peptides in PD-MS spectra suppression was confirmed. Esterification of peptides is shown to be an easy way to overcome spectral suppression. Provided that cationization and spectral suppression of peptides are under control, PD-MS is an excellent tool for protein sequence analysis, affording the necessary complement to automated Edman degradation.     

Dual parallel electrospray ionization and atmospheric pressure chemical ionization mass spectrometry (MS), MS/MS and MS/MS/MS for the analysis of triacylglycerols and triacylglycerol oxidation products

Two mass spectrometers, in parallel, were employed simultaneously for analysis of triacylglycerols in canola oil, for analysis of triolein oxidation products, and for analysis of triacylglycerol positional isomers separated using reversed-phase high-performance liquid chromatography. A triple quadrupole mass spectrometer was interfaced via an atmospheric pressure chemical ionization (APCI) interface to two reversed-phase liquid chromatographic columns in series. An ion trap mass spectrometer was coupled to the same two columns using an electrospray ionization (ESI) interface, with ammonium formate added as electrolyte. Electrospray ionization mass spectrometry (ESI-MS) under these conditions produced abundant ammonium adduct ions from triacylglycerols, which were then fragmented to produce MS/MS spectra and then fragmented further to produce MS/MS/MS spectra. ESI-MS/MS of the ammoniated adduct ions gave product ion mass spectra which were similar to mass spectra obtained by APCI-MS. ESI-MS/MS produced diacylglycerol fragment ions, and additional fragmentation (MS/MS/MS) produced [RCO](+) (acylium) ions, [RCOO+58](+) ions, and other related ions which allowed assignment of individual acyl chain identities. APCI-MS of triacylglycerol oxidation products produced spectra like those reported previously using APCI-MS. APCI-MS/MS produced ions related to individual fatty acid chains. ESI-MS of triacylglycerol oxidation products produced abundant ammonium adduct ions, even for those molecules which previously produced little or no intact molecular ions under APCI-MS conditions. Fragmentation (MS/MS) of the [M+NH(4)](+) ions produced results similar to those obtained by APCI-MS. Further fragmentation (MS/MS/MS) of the diacylglycerol fragments of oxidation products provided information on the oxidized individual fatty acyl chains. ESI-MS and APCI-MS were found to be complementary techniques, which together contributed to a better understanding of the identities of the products formed by oxidation of triacylglycerols.     

Mass spectral fragmentation patterns of various 6-substituted 2,4-bis-(m-aminoanilino)-s-triazines

The mass spectra of 6-substituted-2,4-bis-(m-aminoanilino)-s-triazines were determined and found to be dominated by intense molecular ions (base peak), strong M-H peaks and fragment ions diagnostic for the arylamino and C-6 substituents. Mechanisms have been proposed for the formation of the major peaks in the spectra. Fragmentation pathways involving hydrogen transfer reactions have been rationalized by concomitant opening of the triazine ring rather than an amino-imino tautornerization as previously suggested. Fragmentation reactions accompanied by rearrangement modes have also been encountered in some of the compounds studied.     

Metal ion complexes in the structural analysis of phospholipids by electrospray ionization tandem mass spectrometry

The effects of metal cationization on collisionally activated dissociation (CAD) of phospholipids were investigated by electrospray ionization with quadrupole ion trap tandem mass spectrometry. The metal ions include Li(+), Na(+), K(+), Sr(2+), Ba(2+), and the first transition series. CAD of the transition metal ion-bound lipid complexes gave significant yields of product ions that identify the positions of the two fatty acyl substituents on the glycerophospholipid backbone. The cobalt(II) ion, which has a single naturally occurring isotope, was expected to be a better cationization reagent as it produces simpler mass spectra than other transition metal ions. CAD of the cobalt(II) ion complexes of glycerophosphoethanolamines, glycerophosphoglycerols and glycerophosphoserines yielded product ions that revealed information regarding both the lipid classes and the regiospecific positions of the two fatty acyl substituents.     

The mass spectral fragmentation of some substituted 3-Amino-2-salicylideneamino-benzofurans

Electron impact mass spectra of eight of the title compounds are discussed. The important fragment ions are shown by high resolution and deuterium labelling to contain the benzofuran nucleus and to involve extensive rearrangement processes. Fragmentation pathways have been confirmed by measurement of daughter ion spectra (B/E linked scans).     

Fast-atom bombardment mass spectrometry and low energy collision-induced tandem mass spectrometry of tauroconjugated bile acid anions

Fragmentation of negative ions produced by fast-atom bombardment (FAB) from 14 tauroconjugated bile acids and some of their deuterated analogs has been studied by mass spectrometry and by collision-induced dissociation (CED) tandem mass spectrometry at low energy. Low energy collision-induced dissociation of the deprotonated molecules [M - H]^? of these tauroconjugated bile acids leads to both charge-driven and charge-remote fragmentations (CRF). The former yields neutral loss from the side chain with charge migration during the fragmentation process. These fragments dominate the CID spectra, but are absent from the FAB spectra. Their relative abundances are dependent on the number and the positions of the hydroxyl groups in the steroid nucleus and thus permit distinction among some positional isomers. The CRF fragments correspond to cleavages in the side chain up to fragmentations across the steroid rings with charge retention on the sulfonate group. These CRF fragments, which also are useful for structural identification, are less intense in CID than in FAB spectra. It appears that these charge-remote fragments are favored by unsaturation in the steroid rings, either as keto groups or as endocyclic double bonds. Tandem mass spectrometry combined with the use of deuterated analogs demonstrates that the structures of the survivor pseudomolecular ions and of the CRF fragments are not rearranged.     

Spectral (u.v.-vis,i.r.MS), electrochemical and metallochromic properties of 2-hydroxy-benzoylhydrazones of acetylpyridines

The synthesis, electronic, infra-red and mass spectra of salicyloylhydrazones of 2-, 3-, and 4-acetylpyridine are reported. Ultraviolet absorption spectra have been applied to determine the dissociation constants which are ranged between 4.0–4.5 (pyridine nitrogen) and 6.2–6.3 (OH group). Infrared spectra show that strong intramolecular H-bonding exists in the solid compounds. Fragmentation of these compounds were found to undergo skeletal rearrangement in addition to either CON or NN simple bond cleavage; pyridine nitrogen position contributes in the paths leading to ions. These aroylhydrazones exhibit polarograms that show several reduction waves, the positions of which change with the pH value. Of the three compounds, 3-pyridyl derivative was the most difficult to reduce. The chelating properties of the compounds towards metal ions were investigated. The 2-acetylpyridine derivative results to be the most adequate ligand, as well as a good preconcentrating agent for metal ions.