Accumulative charge separation inspired by photosynthesis

Molecular systems that follow the functional principles of photosynthesis have attracted increasing attention as a method for the direct production of solar fuels. This could give a major carbon-neutral energy contribution to our future society. An outstanding challenge in this research is to couple the light-induced charge separation (which generates a single electron-hole pair) to the multielectron processes of water oxidation and fuel generation. New design considerations are needed to allow for several cycles of photon absorption and charge separation of a single artificial photosystem. Here we demonstrate a molecular system with a regenerative photosensitizer that shows two successive events of light-induced charge separation, leading to high-yield accumulation of redox equivalents on single components without sacrificial agents.     

Odd-even effects in charge transport across self-assembled monolayers

This paper compares charge transport across self-assembled monolayers (SAMs) of n-alkanethiols containing odd and even numbers of methylenes. Ultraflat template-stripped silver (Ag(TS)) surfaces support the SAMs, while top electrodes of eutectic gallium-indium (EGaIn) contact the SAMs to form metal/SAM//oxide/EGaIn junctions. The EGaIn spontaneously reacts with ambient oxygen to form a thin (～1 nm) oxide layer. This oxide layer enables EGaIn to maintain a stable, conical shape (convenient for forming microcontacts to SAMs) while retaining the ability to deform and flow upon contacting a hard surface. Conical electrodes of EGaIn conform (at least partially) to SAMs and generate high yields of working junctions. Ga(2)O(3)/EGaIn top electrodes enable the collection of statistically significant numbers of data in convenient periods of time. The observed difference in charge transport between n-alkanethiols with odd and even numbers of methylenes--the "odd-even effect"--is statistically discernible using these junctions and demonstrates that this technique is sensitive to small differences in the structure and properties of the SAM. Alkanethiols with an even number of methylenes exhibit the expected exponential decrease in current density, J, with increasing chain length, as do alkanethiols with an odd number of methylenes. This trend disappears, however, when the two data sets are analyzed together: alkanethiols with an even number of methylenes typically show higher J than homologous alkanethiols with an odd number of methylenes. The precision of the present measurements and the statistical power of the present analysis are only sufficient to identify, with statistical confidence, the difference between an odd and even number of methylenes with respect to J, but not with respect to the tunneling decay constant, β, or the pre-exponential factor, J(0). This paper includes a discussion of the possible origins of the odd-even effect but does not endorse a single explanation.     

Making a molecular wire: charge and spin transport through para-phenylene oligomers

Functional molecular wires are essential for the development of molecular electronics. Charge transport through molecules occurs primarily by means of two mechanisms, coherent superexchange and incoherent charge hopping. Rates of charge transport through molecules in which superexchange dominates decrease approximately exponentially with distance, which precludes using these molecules as effective molecular wires. In contrast, charge transport rates through molecules in which incoherent charge hopping prevails should display nearly distance independent, wirelike behavior. We are now able to determine how each mechanism contributes to the overall charge transport characteristics of a donor-bridge-acceptor (D-B-A) system, where D = phenothiazine (PTZ), B = p-oligophenylene, and A = perylene-3,4:9,10-bis(dicarboximide) (PDI), by measuring the interaction between two unpaired spins within the system's charge separated state via magnetic field effects on the yield of radical pair and triplet recombination product.     

Selectivity of guest-host interactions in self-assembled hydrogen-bonded nanostructures observed by NMR

We studied the incorporation of various small guest molecules into calix[4]hydroquinone nanotubes and nanoclusters using solid-state proton NMR spectroscopy in combination with quantum chemical calculations. While the molecules exhibit different types of hydrogen bonding and van der Waals interactions, they show different affinities to the nanotube host structures. As the guest molecules are located inside the complexes, they experience a shift in the NMR resonance line caused by screening effects from the aromatic electrons of the host superstructure. The abilities to fill the otherwise empty space within the tubes can hence be measured indirectly by the displacement of the NMR lines relative to the free molecules. In this way, we can probe which guest molecules are recognized by the calix[4]hydroquinones as suitable for filling their nanoporous superstructures. Selective guest-host interactions have been successfully achieved for the three component mixture of water and acetone with either 2-methyl-2-propanol or 2-propanol. In both cases, the alcohols were superior to acetone in filling the CHQ tubes.     

Synthesis, characterization, and electrochemical properties of self-assembled leaf-like CuO nanostructures

A simple hydrothermal process was used to synthesize the assembled leaf-like copper oxide (CuO) from copper hydroxide and urea in aqueous solution. The field emission scanning electron microscopy revealed that the individual CuO leaf-like nanostructure has a dimension of about 0.5–1.5 μm in length, 50–70 nm in thickness, and 80–110 nm in width, respectively. These CuO nanostructures were structurally characterized by X-ray diffraction and Raman spectroscopy, which showed that the CuO nanostructures prepared from the hydrothermal process have high crystalline properties with a monoclinic structure. X-ray photoelectron spectroscopy studies confirmed that the as-prepared sample is composed of CuO, which is consistent with X-ray diffraction patterns. The CuO nanostructures were used as electrode materials for lithium-ion batteries, demonstrating electrochemical properties of a high initial discharge capacity of approximately 1,028 mAh/g along with good cycle stability.     

Multiscale charge injection and transport properties in self-assembled monolayers of biphenyl thiols with varying torsion angles

This article describes the molecular structure-function relationship for a series of biphenylthiol derivatives with varying torsional degree of freedom in their molecular backbone when self-assembled on gold electrodes. These biphenylthiol molecules chemisorbed on Au exhibit different tilt angles with respect to the surface normal and different packing densities. The charge transport through the biphenylthiol self-assembled monolayers (SAMs) showed a characteristic decay trend with the effective monolayer thickness. Based on parallel pathways model the tunneling decay factor β was estimated to be 0.27??(-1) . The hole mobility of poly(3-hexylthiophene)-based thin-film transistors incorporating a biphenylthiol SAM coating the Au source and drain electrodes revealed a dependence on the injection barrier with the highest occupied molecular orbital (HOMO) level of the semiconductor. The possible role of the resistivity of the SAMs on transistor electrodes on the threshold voltage shift is discussed. The control over the chemical structure, electronic properties, and packing order of the SAMs provides a versatile platform to regulate the charge injection in organic electronic devices.     

Flexibility and lengths of bis-peptide nanostructures by electron spin resonance

We demonstrate the use of electron spin resonance (ESR) to determine long-range distances and flexibility in water-soluble bis-peptide molecular rods. Bis-peptide oligomers with 4-8 monomer units were synthesized. ESR determined that the end-to-end length of the peptides is linearly proportional to the number of monomers. The linear shape is, therefore, easily interpreted from the data. In addition, the flexibility of the rods was quantified directly from the ESR-determined distance distribution functions. Quantitative information on chain length and flexibility is important to develop the use of these oligomers as rodlike structural elements for applications such as bivalent display of ligands and as elements of future nanoscale devices.     

Nucleic acid amphiphiles: synthesis and self-assembled nanostructures

This review provides an overview of a relatively new class of bio-conjugates, DNA amphiphiles, which consist of oligonucleotides covalently bonded to synthetic hydrophobic units. The reader will find the basic principles for the structural design and preparation methods of the materials. Moreover, the self-assembly into superstructures of higher order will be highlighted. Finally, some potential applications will be described.     

Generation of diversiform gold nanostructures inspired by honey's components: Growth mechanism, characterization, and shape separation by the centrifugation-assisted sedimentation

The green synthesis of irregular-shaped nanomaterials used for various applications in nanoplasmonics, medicine, and biotechnology creates an economical and environmental challenge. We describe the rapid wet-chemical approach to synthesis of stable and water-soluble gold nanostructues at room temperature. In addition to spherical and road-like nanoparticles, gold decahedra and triangular plates were grown using the one-step synthesis process of HAuCl(4) in the presence of honey, in which main components act as reducing (glucose) and stabilizing (fructose) agents; the mechanism of the process is discussed in details. The requirements for anisotropic phase boundaries for generation of polyhedral gold nanocrystals in solutions are highlighted. The synthesis, morphology, and separation procedure of gold nanoparticles are examined using the techniques of optical spectroscopy, transmission electron microscopy, and atomic force microscopy. We demonstrate that centrifugation can be used for efficient separation of nanoparticles with different shapes from a mixture. It was found that while centrifuging, the spheres sediment at the bottom of the tube, segregating from rods that form a deposit on the side wall, whereas polygons remain in the solution.     

Mechanisms of charge separation in bacterial photosynthesis

The physical aspects of the primary charge separation processes in bacterial photosynthesis are discussed. The donor-acceptor model of electron transfer due to participation of protein current states is used. The kinetics of photosynthetic reaction center (PRC ) processes is investigated and the PRC energetic scheme is constructed using the nonequilibrium density matrix method. It is shown that with allowance for the effect of vibrational sublevels of states participating in transitions the theory describes well experimental data.     

Structural aspects in self-assembled systems of polyoxyethylene surfactants, as studied by the spin probe technique

Typical examples of structural characterization of self-assembled systems by the spin probes technique, selected from our representative results accumulated in the last years of systematic studies, are presented. The choice of the examples has aimed at emphasizing the potentiality of this technique in the study of self-assembled systems, in general, and of those of PEO surfactants, in particular. By using specific ESR parameters (the nitrogen hyperfine splitting (hfs), a_N, the rotational correlation time, τ_c, the order parameter, S) of a variety of properly chosen nitroxides, problems such hydration degree and profile of the PEO chains, ordering and order profile along these chains, their penetrability by the oil solvent, role of the terminal OH in the micellization, as well as differences in these quantities vs. the nature of the aggregate (micelle, reverse micelle, lamellar phase, etc.), nature of the surfactants (conventional or triblock copolymer), solubilizates (water in reverse micelles or various alcohols in micelles) and temperature have been discussed.     

Structure-dependent charge transport and storage in self-assembled monolayers of compounds of interest in molecular electronics: effects of tip material, headgroup, and surface concentration

The electrical properties of self-assembled monolayers (SAMs) on a gold surface have been explored to address the relation between the conductance of a molecule and its electronic structure. We probe interfacial electron transfer processes, particularly those involving electroactive groups, of SAMs of thiolates on Au by using shear force-based scanning probe microscopy (SPM) combined with current-voltage (i-V) and current-distance (i-d) measurements. Peak-shaped i-V curves were obtained for the nitro- and amino-based SAMs studied here. Peak-shaped cathodic i-V curves for nitro-based SAMs were observed at negative potentials in both forward and reverse scans and were used to define the threshold tip bias, V(TH), for electric conduction. For a SAM of 2',5'-dinitro-4,4'-bis(phenylethynyl)-1-benzenethiolate, VII, V(TH) was nearly independent of the tip material [Ir, Pt, Ir-Pt (20-80%), Pd, Ni, Au, Ag, In]. For all of the SAMs studied, the current decreased exponentially with increasing distance, d, between tip and substrate. The exponential attenuation factors (beta values) were lower for the nitro-based SAMs studied here, as compared with alkylthiol-based SAMs. Both V(TH) and beta of the nitro-based SAMs also depended strongly on the molecular headgroup on the end benzene ring addressed by the tip. Finally, we confirmed the "memory" effect observed for nitro-based SAMs. For mixed SAMs of VII and hexadecanethiol, I, the fraction of the charge collected in the negative tip bias region that can be read out at a positive tip bias on reverse scan (up to 38%) depended on the film composition and decreased with an increasing fraction of I, suggesting that lateral electron hopping among molecules of VII occurs in the vicinity of the tip.     

Dynamical mean-field theory for molecules and nanostructures

Dynamical mean-field theory (DMFT) has established itself as a reliable and well-controlled approximation to study correlation effects in bulk solids and also two-dimensional systems. In combination with standard density-functional theory (DFT), it has been successfully applied to study materials in which localized electronic states play an important role. It was recently shown that this approach can also be successfully applied to study correlation effects in nanostructures. Here, we provide some details on our recently proposed DFT+DMFT approach to study the magnetic properties of nanosystems [V. Turkowski, A. Kabir, N. Nayyar, and T. S. Rahman, J. Phys.: Condens. Matter 22, 462202 (2010)] and apply it to examine the magnetic properties of small FePt clusters. We demonstrate that DMFT produces meaningful results even for such small systems. For benchmarking and better comparison with results obtained using DFT+U, we also include the case of small Fe clusters. As in the case of bulk systems, the latter approach tends to overestimate correlation effects in nanostructures. Finally, we discuss possible ways to further improve the nano-DFT+DMFT approximation and to extend its application to molecules and nanoparticles on substrates and to nonequilibrium phenomena.     

Computational study of structure,electronic, and microscopic charge transport properties of small conjugated diketopyrrolopyrrole‐thiophene molecules

π‐Conjugated small molecules containing diketopyrrolopyrrole (DPP) and thiophene moieties represent a modern class of functional materials that exhibit promising charge transport properties and therefore have great potential as building blocks of active elements of electronic devices. As a starting point of this computational study, the molecular structure, electronic characteristics, and reorganization energies associated with electron or hole transfer are considered. Prediction of molecular crystal packing is followed by the calculation of couplings between adjacent molecules and detection of the effective charge transfer pathways. Finally, the rates of charge transfer process are evaluated. The obtained results shed light not only on the properties of materials containing low‐molecular species but also serve as a benchmark for further classical force‐field simulations of DPP‐based polymers.     

Deformation of a "rigid" molecule in self-assembled nanostructures

A simple spirobifluorene molecule with pseudotetrahedral structure was investigated for its supposed conformational resilience upon adsorption. Through deposition at room temperature of this molecule on a Cu(111) surface and subsequent observation at 5 K with an ultrahigh vacuum scanning tunneling microscope, this "rigidity" upon physisorption is confirmed. However, an unexpected chemisorbed state was also found with the molecules arranged in trimers. The unique coexistence of physisorbed and chemisorbed states on the same substrate is thus demonstrated at the early stage of self-assembly.     

Photoregulated transmembrane charge separation by linked spiropyran-anthraquinone molecules

Amide-linked spiropyran-anthraquinone (SP-AQ) conjugates were shown to mediate ZnTPPS(4-)-photosensitized transmembrane reduction of occluded Co(bpy)3(3+) within unilamellar phosphatidylcholine vesicles by external EDTA. Overall quantum yields for these reactions were dependent upon the isomeric state of the dye; specifically, 30-35% photoconversion of the closed-ring spiropyran (SP) moiety to the open-ring merocyanine (MC) form caused the quantum yield to decrease by 6-fold in the simple conjugate and 3-fold for an analogue containing a lipophilic 4-dodecylphenoxy substituent on the anthraquinone moiety. Transient spectroscopic and fluorescence quenching measurements revealed that two factors contributed to these photoisomerization-induced changes in quantum yields: increased efficiencies of fluorescence quenching of 1ZnTPPS4- by the merocyanine group and lowered transmembrane diffusion rates of the merocyanine-containing redox carriers. Transient spectrophotometry also revealed the sequential formation and decay of two reaction intermediates, identified as 3ZnTPPS4- and a species with the optical properties of a semiquinone radical. Kinetic profiles for Co(bpy)3(3+) reduction under continuous photolysis in the presence and absence of added ionophores indicated that transmembrane redox mediated by SP-AQ was electroneutral, but reaction by the other quinone-containing mediators was electrogenic. The minimal reaction mechanism suggested from the combined studies is oxidative quenching of vesicle-bound 3ZnTPPS4- by the anthraquinone unit, followed by either H+/e- cotransport by transmembrane diffusion of SP-AQH* or, for the other redox mediators, semiquinone anion-quinone electron exchange leading to net transmembrane electron transfer, with subsequent one-electron reduction of the internal Co(bpy)3(3+). Thermal one-electron reduction of Co(bpy)3(3+) by EDTA is energetically unfavorable; the photosensitized reaction therefore occurs with partial conversion of photonic energy to chemical and transmembrane electrochemical potentials.     

A Co4O4 "cubane" water oxidation catalyst inspired by photosynthesis

Herein we describe the molecular Co(4)O(4) cubane complex Co(4)O(4)(OAc)(4)(py)(4) (1), which catalyzes efficient water oxidizing activity when powered by a standard photochemical oxidation source or electrochemical oxidation. The pH dependence of catalysis, the turnover frequency, and in situ monitoring of catalytic species have revealed the intrinsic capabilities of this core type. The catalytic activity of complex 1 and analogous Mn(4)O(4) cubane complexes is attributed to the cubical core topology, which is analogous to that of nature's water oxidation catalyst, a cubical CaMn(4)O(5) cluster.     

Converting self-assembled gold nanoparticle/dendrimer nanodroplets into horseshoe-like nanostructures by thermal annealing

A simple and effective nonlithographic method to produce a novel organization of noble metal nanoparticles into horseshoe-like nanostructures via self-assembly is described. The adsorption of Au nanoparticles stabilized with the dendrimer 1,2,3,4,5,6-hexakis[(3',5'-bis(benzyloxy)benzyl)sulfanylmethyl]benzene (S(6)G(1)) on hydrophilic surfaces (native oxide-terminated Si(111)) resulted in the formation of spatially correlated droplet aggregates. Annealing of Au/S(6)G(1) in thin films caused amalgamated droplets to form arrays of horseshoe-like nanostructures with an average size of approximately 250 nm and an average height of 13 nm. The mobility and the manner in which the semicapped Au nanoparticles are distributed on the hydrophilic substrate are believed to be the promoters that control the growth of the nucleation to create the horseshoe-like structures. Atomic force microscopy (AFM) measurements demonstrated the changes in height and size of the nanoparticles before and after the annealing process. Oxygen plasma etching was used to remove the S(6)G(1) dendrimer to reveal the orientation of the Au nanocrystals in the nanostructure matrix.