Frequency enhancement in coupled noisy excitable elements: effects of network topology

Coupled excitable elements in the presence of noise can exhibit oscillatory behavior with non-trivial frequency dependence as the coupling strength of the system increases. The phenomenon of frequency enhancement (FE) occurs in some coupling regime, in which the elements can oscillate with a frequency higher than their uncoupled frequencies. In this paper, details of the FE are investigated by simulations of the FitzHugh-Nagumo model with different network topologies. It is found that the characteristics of FE, such as the maximal enhancement coupling, enhancement level etc, are functions of the network topology and spatial dimensions. The effect of excitability and the spatio-temporal patterns during FE are investigated to provide an intuitive picture for the enhancement mechanism. Interestingly, some of these characteristics of FE can be described by scaling laws; suggesting the existence of universality in the FE phenomenon. The relevance of these results to biological rhythms are also discussed.     

Dynamical quorum sensing and synchronization in collections of excitable and oscillatory catalytic particles

We present experimental studies of interacting excitable and oscillatory catalytic particles in well-stirred and spatially distributed systems. A number of distinct paths to synchronized oscillatory behavior are described. We present an example of a Kuramoto type transition in a well-stirred system with a collective rhythm emerging on increasing the number density of oscillatory particles. Groups of spatially distributed oscillatory particles become entrained to a common frequency by organizing centers. Quorum sensing type transitions are found in populations of globally and locally coupled excitable particles, with a sharp transition from steady state to fully synchronized behavior at a critical density or group size.     

Termination of spiral wave breakup in a Fitzhugh-Nagumo model via short and long duration stimuli

Rotating spiral waves have been observed in a variety of nonlinear biological and physical systems. Spiral waves are found in excitable and oscillatory systems and can be stationary, meander, or even degenerate into multiple unstable rotating waves (a process called "spiral wave breakup"). In the heart, spiral wave breakup is thought to be the underlying mechanism of cardiac fibrillation. The spatiotemporal complexity of multiple unstable spiral waves is difficult to control or terminate. Here, the mechanisms of the termination of spiral wave breakup in response to global stimulation are investigated. A modified Fitzhugh-Nagumo model was used to represent cellular kinetics to study the role of the fast (activation) and slow (recovery) variables. This simplified model allows a theoretical analysis of the termination of spiral wave breakup via both short and long duration pulses. Simulations were carried out in both two-dimensional sheets and in a three-dimensional geometry of the heart ventricles. The short duration pulses affected only the fast variable and acted to reset wave propagation. Monophasic pulses excited tissue ahead of the wave front thus reducing the amount of excitable tissue. Biphasic shocks did the same, but they also acted to generate new wave fronts from the pre-existing wave tails by making some active regions excitable. Thus, if the short duration stimuli were strong enough, they acted to fill in excitable tissue via propagating wave fronts and terminated all activity. The long duration wave forms were selected such that they had a frequency spectrum similar to that of the pseudoelectrocardiograms recorded during fibrillation. These long duration wave forms affected both the recovery and activation variables, and the mechanism of unstable multiple spiral wave termination was different compared to the short duration wave forms. If the long duration stimuli were strong enough, they acted to alter the "state" (i.e., combination of fast and slow variables) of the tissue throughout 1.5 cycles, thus "conditioning" the tissue such that by the end of the stimuli almost no excitable tissue remained. The peak current, total energy, and average power of stimuli required to terminate spiral wave breakup were less for the long duration wave forms compared to the short duration wave forms. In addition, closed loop feedback via stimulation with a wave form that was the difference of the pseudoelectrocardiogram and a strongly periodic chaotic signal was successful at terminating spiral wave breakup. These results suggest that it may be possible to improve cardiac defibrillation efficacy by using long duration wave forms to affect recovery variables in the heart as opposed to the traditional brief duration wave forms that act only on the fast variables. (c) 2002 American Institute of Physics.     

Improved functional-weight approach to oscillatory patterns in excitable networks

Studies of sustained oscillations on complex networks with excitable node dynamics received much interest in recent years. Although an individual unit is non-oscillatory, they may organize to form various collective oscillatory patterns through networked connections. An excitable network usually possesses a number of oscillatory modes dominated by different Winfree loops and numerous spatiotemporal patterns organized by different propagation path distributions. The traditional approach of the so-called dominant phase-advanced drive method has been well applied to the study of stationary oscillation patterns on a network. In this paper, we develop the functional-weight approach that has been successfully used in studies of sustained oscillations in gene-regulated networks by an extension to the high-dimensional node dynamics. This approach can be well applied to the study of sustained oscillations in coupled excitable units. We tested this scheme for different networks, such as homogeneous random networks, small-world networks, and scale-free networks and found it can accurately dig out the oscillation source and the propagation path. The present approach is believed to have the potential in studies competitive non-stationary dynamics.     

Spiking dynamics of interacting oscillatory neurons

Spiking sequences emerging from dynamical interaction in a pair of oscillatory neurons are investigated theoretically and experimentally. The model comprises two unidirectionally coupled FitzHugh-Nagumo units with modified excitability (MFHN). The first (master) unit exhibits a periodic spike sequence with a certain frequency. The second (slave) unit is in its excitable mode and responds on the input signal with a complex (chaotic) spike trains. We analyze the dynamic mechanisms underlying different response behavior depending on interaction strength. Spiking phase maps describing the response dynamics are obtained. Complex phase locking and chaotic sequences are investigated. We show how the response spike trains can be effectively controlled by the interaction parameter and discuss the problem of neuronal information encoding.     

Properties of elastic waves in quasiregular structures with planar defects

We have studied the elastic waves in quasiregular structures following the Fibonacci and Rudin–Shapiro sequences, and having planar defects, that is breaks of the quasiregular structure in different parts of the system. It is seen that the different kinds of defects produce effects on different ranges of the frequency spectrum, and can introduce more localized states in the gaps, or modify the frequencies of the states in the gaps. We have also studied the phase time and transmission coefficients, thus seeing how these localized modes can be used as frequency filters.     

Anomalous pulse interaction in dissipative media

We review a number of phenomena occurring in one-dimensional excitable media due to modified decay behind propagating pulses. Those phenomena can be grouped in two categories depending on whether the wake of a solitary pulse is oscillatory or not. Oscillatory decay leads to nonannihilative head-on collision of pulses and oscillatory dispersion relation of periodic pulse trains. Stronger wake oscillations can even result in a bistable dispersion relation. Those effects are illustrated with the help of the Oregonator and FitzHugh-Nagumo models for excitable media. For a monotonic wake, we show that it is possible to induce bound states of solitary pulses and anomalous dispersion of periodic pulse trains by introducing nonlocal spatial coupling to the excitable medium.     

Nonlinear dynamics of the membrane potential of a bursting pacemaker cell

This article presents the results of an exploration of one two-parameter space of the Chay model of a cell excitable membrane. There are two main regions: a peripheral one, where the system dynamics will relax to an equilibrium point, and a central one where the expected dynamics is oscillatory. In the second region, we observe a variety of self-sustained oscillations including periodic oscillation, as well as bursting dynamics of different types. These oscillatory dynamics can be observed as periodic oscillations with different periodicities, and in some cases, as chaotic dynamics. These results, when displayed in bifurcation diagrams, result in complex bifurcation structures, which have been suggested as relevant to understand biological cell signaling.     

Structure of a Phase-Separating System in the Presence of Oscillatory Particles

We numerically simulate the processing of the phase separation of the polymer blend-particle system under fluctuating fields by new discretization‘s form. Due to the presence of oscillatory particles which have an affinity for one of the components, the ordering mechanism of phase separation will be changed. By changing the oscillatory frequency ω and amplitude γ, we can find the formation of the striped structures either parallel or perpendicular to the oscillatory direction and obtain a diagram describing the orientational ordering of the domain structures.     

Discrete coherent amplification of oscillations by nonresonant forcing

A new mechanism of generation of oscillations in a linear forced oscillatory system is found. Natural oscillations may be generated at a "sharp" pulse (rapid variation) of the natural frequency. In this process oscillations are generated by nonresonant forcing, e.g., by the action of a constant, nonperiodic or periodic force (with driving frequency much less than the natural one). Repetitive pulses of the natural frequency result in emergence of oscillations that interfere and may give a powerful resultant output. These phenomena relate to a basis of the theory of open linear oscillatory systems.     

Oscillatory traveling waves in excitable media

A new type of waves in an excitable medium, characterized by oscillatory profile, is described. The excitable medium is modeled by a two-component activator-inhibitor system. Reaction-diffusion systems with diagonal and cross diffusion are examined. As an example, a front (kink) represented by a heteroclinic orbit in the phase space is considered. The wave shape and velocity are analyzed with the use of exact analytical solutions for wave profiles.     

Chemical turbulence and standing waves in a surface reaction model: The influence of global coupling and wave instabilities

Among heterogeneously catalyzed chemical reactions, the CO oxidation on the Pt(110) surface under vacuum conditions offers probably the greatest wealth of spontaneous formation of spatial patterns. Spirals, fronts, and solitary pulses were detected at low surface temperatures (T<500 K), in line with the standard phenomenology of bistable, excitable, and oscillatory reaction-diffusion systems. At high temperatures (T greater, similar 540 K), more surprising features like chemical turbulence and standing waves appeared in the experiments. Herein, we study a realistic reaction-diffusion model of this system, with respect to the latter phenomena. In particular, we deal both with the influence of global coupling through the gas phase on the oscillatory reaction and the possibility of wave instabilities under excitable conditions. Gas-phase coupling is shown to either synchronize the oscillations or to yield turbulence and standing structures. The latter findings are closely related to clustering in networks of coupled oscillators and indicate a dominance of the global gas-phase coupling over local coupling via surface diffusion. In the excitable regime wave instabilities in one and two dimensions have been discovered. In one dimension, pulses become unstable due to a vanishing of the refractory zone. In two dimensions, turbulence can also emerge due to spiral breakup, which results from a violation of the dispersion relation.     

Chaotic patterns in a coupled oscillator-excitator biochemical cell system

In this paper we examine dynamical modes resulting from diffusion-like interaction of two model biochemical cells. Kinetics in each of the cells is given by the ICC model of calcium ions in the cytosol. Constraints for one of the cells are set so that it is excitable. One of the constraints in the other cell - a fraction of activated cell surface receptors-is varied so that the dynamics in the cell is either excitable or oscillatory or a stable focus. The cells are interacting via mass transfer and dynamics of the coupled system are studied as two parameters are varied-the fraction of activated receptors and the coupling strength. We find that (i) the excitator-excitator interaction does not lead to oscillatory patterns, (ii) the oscillator-excitator interaction leads to alternating phase-locked periodic and quasiperiodic regimes, well known from oscillator-oscillator interactions; torus breaking bifurcation generates chaos when the coupling strength is in an intermediate range, (iii) the focus-excitator interaction generates compound oscillations arranged as period adding sequences alternating with chaotic windows; the transition to chaos is accompanied by period doublings and folding of branches of periodic orbits and is associated with a Shilnikov homoclinic orbit. The nature of spontaneous self-organized oscillations in the focus-excitator range is discussed. (c) 1999 American Institute of Physics.     

Mechanism for spiral wave breakup in excitable and oscillatory media

We study spiral wave breakup using a Fitzhugh-Nagumo-type system. We find that spiral wave breakup can occur near the core or far from it in both excitable and oscillatory regimes. There is a faraway breakup scenario in both excitable and oscillatory media that depends on long wavelength modulation modes. We observed three distinct scenarios, including one that involves breakup that does not develop into turbulence. However, we find that the mechanisms behind these three scenarios are the same: they are caused by the interaction between the dispersion relation and the asymptotic behavior of the modulation mode. The difference in phenomenology is due to the asymptotic behavior of the modulation mode.     

Controlling Chaos in a Semiconductor Laser via Weak Optical Positive Feedback and Modulating Amplitude

Numerical analysis of weak optical positive feedback (OPF) controlling chaos is studied in a semiconductor laser.The physical model of controlling chaos produced via modulating the current of semiconductor laser is presented under the condition of OPF.We find the physical mechanism that the nonlinear gain coefficient and linewidth enhancement factor of the laser are affected by OPF so that the dynamical behaviour of the system can be efficiently controlled.Chaos is controlled into a single-periodic state,a dual-periodic state,a fri-periodic state,a quadr-periodic state,a pentaperiodic state,and the laser emitting powers are increased by OPF in simulations.Lastly,another chaos-control method with modulating the amplitude of the feedback light is presented and numerically simulated to control chaotic laser into multi-periodic states.     

Coherence resonance and stochastic synchronization in a nonlinear circuit near a subcritical Hopf bifurcation

We analyze noise-induced phenomena in nonlinear dynamical systems near a subcritical Hopf bifurcation. We investigate qualitative changes of probability distributions (stochastic bifurcations), coherence resonance, and stochastic synchronization. These effects are studied in dynamical systems for which a subcritical Hopf bifurcation occurs. We perform analytical calculations, numerical simulations and experiments on an electronic circuit. For the generalized Van der Pol model we uncover the similarities between the behavior of a self-sustained oscillator characterized by a subcritical Hopf bifurcation and an excitable system. The analogy is manifested through coherence resonance and stochastic synchronization. In particular, we show both experimentally and numerically that stochastic oscillations that appear due to noise in a system with hard excitation, can be partially synchronized even outside the oscillatory regime of the deterministic system.     

对史密斯-帕塞尔自由电子激光光栅的研究

为了研究史密斯-帕塞尔自由电子激光的输出频率和光栅槽深、光栅槽长、光栅槽宽的关系,对于基于矩形光栅的史密斯-帕塞尔自由电子激光利用粒子模拟软件进行模拟和理论分析。首先,利用粒子模拟软件模拟对于基于矩形光栅的史密斯-帕塞尔自由电子激光进行了研究,发现史密斯-帕塞尔自由电子激光的输出频率随光栅槽深、光栅槽长、光栅槽宽的增大而减少。接着,对史密斯-帕塞尔自由电子激光的光栅槽进行了理论分析,发现每个光栅槽都可以等效为一个LC谐振电路,并发现在史密斯-帕塞尔自由电子激光中存在两种辐射,一种是史密斯-帕塞尔辐射,另一种是LC振荡辐射。最后,对光栅槽的LC振荡辐射进行了估算,发现史密斯-帕塞尔自由电子激光输出频率的模拟值与光栅槽的LC振荡辐射估算值的数量级均为102 GHz,且变化规律上一致。据此推测决定史密斯-帕塞尔自由电子激光输出频率的应该是光栅槽,而不是谐振腔。     

Cooperative behavior between oscillatory and excitable units: the peculiar role of positive coupling-frequency correlations

We study the collective dynamics of noise-driven excitable elements, so-called active rotators. Crucially here, the natural frequencies and the individual coupling strengths are drawn from some joint probability distribution. Combining a mean-field treatment with a Gaussian approximation allows us to find examples where the infinite-dimensional system is reduced to a few ordinary differential equations. Our focus lies in the cooperative behavior in a population consisting of two parts, where one is composed of excitable elements, while the other one contains only self-oscillatory units. Surprisingly, excitable behavior in the whole system sets in only if the excitable elements have a smaller coupling strength than the self-oscillating units. In this way positive local correlations between natural frequencies and couplings shape the global behavior of mixed populations of excitable and oscillatory elements.     

Phase Space Compression in One-Dimensional Complex Ginzburg-Landau Equation

The transition from stationary to oscillatory states in dynamical systems under phase space compression is investigated. By considering the model for the spatially one-dimensional complex Ginzburg-Landau equation, we find that defect turbulence can be substituted with stationary and oscillatory signals by applying system perturbation and confining variable into various ranges. The transition procedure described by the oscillatory frequency is studied via numerical simulations in detail.     

Travelling waves in a model of quasi-active dendrites with active spines

Dendrites, the major components of neurons, have many different types of branching structures and are involved in receiving and integrating thousands of synaptic inputs from other neurons. Dendritic spines with excitable channels can be present in large densities on the dendrites of many cells. The recently proposed Spike-Diffuse-Spike (SDS) model that is described by a system of point hot-spots (with an integrate-and-fire process) embedded throughout a passive tree has been shown to provide a reasonable caricature of a dendritic tree with supra-threshold dynamics. Interestingly, real dendrites equipped with voltage-gated ion channels can exhibit not only supra-threshold responses, but also sub-threshold dynamics. This sub-threshold resonant-like oscillatory behaviour has already been shown to be adequately described by a quasi-active membrane. In this paper we introduce a mathematical model of a branched dendritic tree based upon a generalisation of the SDS model where the active spines are assumed to be distributed along a quasi-active dendritic structure. We demonstrate how solitary and periodic travelling wave solutions can be constructed for both continuous and discrete spine distributions. In both cases the speed of such waves is calculated as a function of system parameters. We also illustrate that the model can be naturally generalised to an arbitrary branched dendritic geometry whilst remaining computationally simple. The spatio-temporal patterns of neuronal activity are shown to be significantly influenced by the properties of the quasi-active membrane. Active (sub- and supra-threshold) properties of dendrites are known to vary considerably among cell types and animal species, and this theoretical framework can be used in studying the combined role of complex dendritic morphologies and active conductances in rich neuronal dynamics.