Noise-induced synchronous stochastic oscillations in small scale cultured heart-cell networks

This paper reports that the synchronous integer multiple oscillations of heart-cell networks or clusters are observed in the biology experiment.The behaviour of the integer multiple rhythm is a transition between super-and subthreshold oscillations,the stochastic mechanism of the transition is identified.The similar synchronized oscillations are theoretically reproduced in the stochastic network composed of heterogeneous cells whose behaviours are chosen as excitable or oscillatory states near a Hopf bifurcation point.The parameter regions of coupling strength and noise density that the complex oscillatory rhythms can be simulated are identified.The results show that the rhythm results from a simple stochastic alternating process between super-and sub-threshold oscillations.Studies on single heart cells forming these clusters reveal excitable or oscillatory state nearby a Hopf bifurcation point underpinning the stochastic alternation.In discussion,the results are related to some abnormal heartbeat rhythms such as the sinus arrest.     

Suppression of chaos and other dynamical transitions induced by intercellular coupling in a model for cyclic AMP signaling in Dictyostelium cells

The effect of intercellular coupling on the switching between periodic behavior and chaos is investigated in a model for cAMP oscillations in Dictyostelium cells. We first analyze the dynamic behavior of a homogeneous cell population which is governed by a three-variable differential system for which bifurcation diagrams are obtained as a function of two control parameters. We then consider the mixing of two populations behaving in a chaotic and periodic manner, respectively. Cells are coupled through the sharing of a common chemical intermediate, extracellular cAMP, which controls its production and release by the cells into the extracellular medium; the dynamics of the mixed suspension is governed by a five-variable differential system. When the two cell populations differ by the value of a single parameter which measures the activity of the enzyme that degrades extracellular cAMP, the bifurcation diagram established for the three-variable homogeneous population can be used to predict the dynamic behavior of the mixed suspension. The analysis shows that a small proportion of periodic cells can suppress chaos in the mixed suspension. Such a fragility of chaos originates from the relative smallness of the domain of aperiodic oscillations in parameter space. The bifurcation diagram is used to obtain the minimum fraction of periodic cells suppressing chaos. These results are related to the suppression of chaos by the small-amplitude periodic forcing of a strange attractor. Numerical simulations further show how the coupling of periodic cells with chaotic cells can produce chaos, bursting, simple periodic oscillations, or a stable steady state; the coupling between two populations at steady state can produce similar modes of dynamic behavior.     

Global organization of dynamics in oscillatory heterogeneous excitable media

An oscillatory heterogeneous excitable medium undergoes a transition from periodic target patterns to a bursting rhythm driven by the spontaneous initiation and termination of spiral waves as coupling or density is reduced. We illustrate these phenomena in monolayers of chick embryonic heart cells using calcium-sensitive fluorescent dyes. These results are modeled in a heterogeneous cellular automaton in which the neighborhood of interaction and cell density is modified. Parameters that give rise to bursting rhythms are organized in distinct zones in parameter space, leading to a global organization that should be applicable to the dynamics in a large class of excitable media.     

Cluster synchronization and spatio-temporal dynamics in networks of oscillatory and excitable Luo-Rudy cells

We study collective phenomena in nonhomogeneous cardiac cell culture models, including one- and two-dimensional lattices of oscillatory cells and mixtures of oscillatory and excitable cells. Individual cell dynamics is described by a modified Luo-Rudy model with depolarizing current. We focus on the transition from incoherent behavior to global synchronization via cluster synchronization regimes as coupling strength is increased. These regimes are characterized qualitatively by space-time plots and quantitatively by profiles of local frequencies and distributions of cluster sizes in dependence upon coupling strength. We describe spatio-temporal patterns arising during this transition, including pacemakers, spiral waves, and complicated irregular activity.     

Nonlinear dynamics of the membrane potential of a bursting pacemaker cell

This article presents the results of an exploration of one two-parameter space of the Chay model of a cell excitable membrane. There are two main regions: a peripheral one, where the system dynamics will relax to an equilibrium point, and a central one where the expected dynamics is oscillatory. In the second region, we observe a variety of self-sustained oscillations including periodic oscillation, as well as bursting dynamics of different types. These oscillatory dynamics can be observed as periodic oscillations with different periodicities, and in some cases, as chaotic dynamics. These results, when displayed in bifurcation diagrams, result in complex bifurcation structures, which have been suggested as relevant to understand biological cell signaling.     

Anomalous pulse interaction in dissipative media

We review a number of phenomena occurring in one-dimensional excitable media due to modified decay behind propagating pulses. Those phenomena can be grouped in two categories depending on whether the wake of a solitary pulse is oscillatory or not. Oscillatory decay leads to nonannihilative head-on collision of pulses and oscillatory dispersion relation of periodic pulse trains. Stronger wake oscillations can even result in a bistable dispersion relation. Those effects are illustrated with the help of the Oregonator and FitzHugh-Nagumo models for excitable media. For a monotonic wake, we show that it is possible to induce bound states of solitary pulses and anomalous dispersion of periodic pulse trains by introducing nonlocal spatial coupling to the excitable medium.     

Self-sustained spatiotemporal oscillations induced by membrane-bulk coupling

We propose a novel mechanism leading to spatiotemporal oscillations in extended systems that does not rely on local bulk instabilities. Instead, oscillations arise from the interaction of two subsystems of different spatial dimensionality. Specifically, we show that coupling a passive diffusive bulk of dimension d with an excitable membrane of dimension d-1 produces a self-sustained oscillatory behavior. An analytical explanation of the phenomenon is provided for d=1. Moreover, in-phase and antiphase synchronization of oscillations are found numerically in one and two dimensions. This novel dynamic instability could be used by biological systems such as cells, where the dynamics on the cellular membrane is necessarily different from that of the cytoplasmic bulk.     

Symmetry breaking,bifurcations, quasiperiodicity,and chaos due to electric fields in a coupled cell model

A model for the asymmetric coupling of two oscillatory cells is considered. The coupling between the cells is both through diffusional exchange (symmetric) and through the electromigration of ionic reactant species from one cell to the other (asymmetric) in applied electric fields. The kinetics in each cell are the same and based on the Gray-Scott scheme. Without the electric field, only simple, stable dynamics are seen. The effect of the asymmetry (applying electric fields) is to create a wide variety of stable dynamics, multistability, multiperiodic oscillations, quasiperiodicity and chaos being observed, this complexity in response being more prevalent at weaker coupling rates and at weaker field strengths. The results are obtained using a standard dynamical systems continuation program, though asymptotic results are obtained for strong coupling rates and strong electric fields. These are seen to agree well with the numerically determined values in the appropriate parameter regimes. (c) 2002 American Institute of Physics.     

From simple to complex oscillatory behavior in metabolic and genetic control networks

We present an overview of mechanisms responsible for simple or complex oscillatory behavior in metabolic and genetic control networks. Besides simple periodic behavior corresponding to the evolution toward a limit cycle we consider complex modes of oscillatory behavior such as complex periodic oscillations of the bursting type and chaos. Multiple attractors are also discussed, e.g., the coexistence between a stable steady state and a stable limit cycle (hard excitation), or the coexistence between two simultaneously stable limit cycles (birhythmicity). We discuss mechanisms responsible for the transition from simple to complex oscillatory behavior by means of a number of models serving as selected examples. The models were originally proposed to account for simple periodic oscillations observed experimentally at the cellular level in a variety of biological systems. In a second stage, these models were modified to allow for complex oscillatory phenomena such as bursting, birhythmicity, or chaos. We consider successively (1) models based on enzyme regulation, proposed for glycolytic oscillations and for the control of successive phases of the cell cycle, respectively; (2) a model for intracellular Ca(2+) oscillations based on transport regulation; (3) a model for oscillations of cyclic AMP based on receptor desensitization in Dictyostelium cells; and (4) a model based on genetic regulation for circadian rhythms in Drosophila. Two main classes of mechanism leading from simple to complex oscillatory behavior are identified, namely (i) the interplay between two endogenous oscillatory mechanisms, which can take multiple forms, overt or more subtle, depending on whether the two oscillators each involve their own regulatory feedback loop or share a common feedback loop while differing by some related process, and (ii) self-modulation of the oscillator through feedback from the system's output on one of the parameters controlling oscillatory behavior. However, the latter mechanism may also be viewed as involving the interplay between two feedback processes, each of which might be capable of producing oscillations. Although our discussion primarily focuses on the case of autonomous oscillatory behavior, we also consider the case of nonautonomous complex oscillations in a model for circadian oscillations subjected to periodic forcing by a light-dark cycle and show that the occurrence of entrainment versus chaos in these conditions markedly depends on the wave form of periodic forcing. (c) 2001 American Institute of Physics.     

Network dynamics and its relationships to topology and coupling structure in excitable complex networks

All dynamic complex networks have two important aspects, pattern dynamics and network topology. Discovering different types of pattern dynamics and exploring how these dynamics depend or/network topologies are tasks of both great theoretical importance and broad practical significance. In this paper we study the oscillatory behaviors of excitable complex networks （ECNs） and find some interesting dynamic behaviors of ECNs in oscillatory probability, the multiplicity of oscillatory attractors, period distribution, and different types of oscillatory patterns （e.g., periodic, quasiperiodic, and chaotic）. In these aspects, we further explore strikingly sharp differences among network dynamics induced by different topologies （random or scale-free topologies） and different interaction structures （symmetric or asymmetric couplings）. The mechanisms behind these differences are explained physically.     

A bifurcation analysis of two coupled calcium oscillators

In many cell types, asynchronous or synchronous oscillations in the concentration of intracellular free calcium occur in adjacent cells that are coupled by gap junctions. Such oscillations are believed to underlie oscillatory intercellular calcium waves in some cell types, and thus it is important to understand how they occur and are modified by intercellular coupling. Using a previous model of intracellular calcium oscillations in pancreatic acinar cells, this article explores the effects of coupling two cells with a simple linear diffusion term. Depending on the concentration of a signal molecule, inositol (1,4,5)-trisphosphate, coupling two identical cells by diffusion can give rise to synchronized in-phase oscillations, as well as different-amplitude in-phase oscillations and same-amplitude antiphase oscillations. Coupling two nonidentical cells leads to more complex behaviors such as cascades of period doubling and multiply periodic solutions. This study is a first step towards understanding the role and significance of the diffusion of calcium through gap junctions in the coordination of oscillatory calcium waves in a variety of cell types. (c) 2001 American Institute of Physics.     

Spiking dynamics of interacting oscillatory neurons

Spiking sequences emerging from dynamical interaction in a pair of oscillatory neurons are investigated theoretically and experimentally. The model comprises two unidirectionally coupled FitzHugh-Nagumo units with modified excitability (MFHN). The first (master) unit exhibits a periodic spike sequence with a certain frequency. The second (slave) unit is in its excitable mode and responds on the input signal with a complex (chaotic) spike trains. We analyze the dynamic mechanisms underlying different response behavior depending on interaction strength. Spiking phase maps describing the response dynamics are obtained. Complex phase locking and chaotic sequences are investigated. We show how the response spike trains can be effectively controlled by the interaction parameter and discuss the problem of neuronal information encoding.     

Self-organized transition to coherent activity in disordered media

Synchronized oscillations are of critical functional importance in many biological systems. We show that such oscillations can arise without centralized coordination in a disordered system of electrically coupled excitable and passive cells. Increasing the coupling strength results in waves that lead to coherent periodic activity, exhibiting cluster, local and global synchronization under different conditions. Our results may explain the self-organized transition in a pregnant uterus from transient, localized activity initially to system-wide coherent excitations just before delivery.     

Cytoskeletal turnover and Myosin contractility drive cell autonomous oscillations in a model of Drosophila Dorsal Closure

Oscillatory behaviour in force-generating systems is a pervasive phenomenon in cell biology. In this work, we investigate how oscillations in the actomyosin cytoskeleton drive cell shape changes during the process of Dorsal Closure (DC), a morphogenetic event in Drosophila embryo development whereby epidermal continuity is generated through the pulsatile apical area reduction of cells constituting the amnioserosa (AS) tissue. We present a theoretical model of AS cell dynamics by which the oscillatory behaviour arises due to a coupling between active myosin-driven forces, actin turnover and cell deformation. Oscillations in our model are cell-autonomous and are modulated by neighbour coupling, and our model accurately reproduces the oscillatory dynamics of AS cells and their amplitude and frequency evolution. A key prediction arising from our model is that the rate of actin turnover and Myosin contractile force must increase during DC in order to reproduce the decrease in amplitude and period of cell area oscillations observed in vivo. This prediction opens up new ways to think about the molecular underpinnings of AS cell oscillations and their link to net tissue contraction and suggests the form of future experimental measurements.     

Limit cycles and chaos in realistic models of the Belousov-Zhabotinskii reaction system

Effects of spatial variation in the Belousov-Zhabotinskii reaction is studied numerically by adopting the Field-Noyes kinetics (Oregonator) and the Zhabotinskii-Zaikin-Korzukhin-Kreitser kinetics. This is carried out for a spatially-discrete model composed ofN equivalent cells interacting through gradient coupling. When the system is near the boundary at which a uniform steady state bifurcates into a limit cycle, it is found with the aid of a perturbation expansion that the above models withN=3 exhibit various types of oscillations depending on the interaction strength between cells. Chaotic characteristics are also observed for a certain region of parameters. It is shown that the ZZKK model withN=2 exhibits a different kind of chaos when the size of the limit cycle becomes sensitive to external parameters, e.g., the concentrations of bromate ion or bromomalonic acid. Although each cell is equivalent, symmetry about cell numbers usually breaks down in a periodic state. It is found, however, that symmetry is recovered for the former kind of chaos, while the latter kind of chaos, there exists an asymmetric chaos as well as symmetric chaos. This has been examined by the time evolution of a certain concentration variable and by its Lorenz plot. In the asymmetric chaos, the Lorenz plot constitutes approximately a one-dimensional map. Furthermore, possible connections of the present limit cycles and chaos with the experiments of Zhabotinskii and Vavilin-Zhabotinskii-Zaikin are suggested.     

Cooperative behavior between oscillatory and excitable units: the peculiar role of positive coupling-frequency correlations

We study the collective dynamics of noise-driven excitable elements, so-called active rotators. Crucially here, the natural frequencies and the individual coupling strengths are drawn from some joint probability distribution. Combining a mean-field treatment with a Gaussian approximation allows us to find examples where the infinite-dimensional system is reduced to a few ordinary differential equations. Our focus lies in the cooperative behavior in a population consisting of two parts, where one is composed of excitable elements, while the other one contains only self-oscillatory units. Surprisingly, excitable behavior in the whole system sets in only if the excitable elements have a smaller coupling strength than the self-oscillating units. In this way positive local correlations between natural frequencies and couplings shape the global behavior of mixed populations of excitable and oscillatory elements.     

Noise induced complexity: from subthreshold oscillations to spiking in coupled excitable systems

We study the stochastic dynamics of an ensemble of N globally coupled excitable elements. Each element is modeled by a FitzHugh-Nagumo oscillator and is disturbed by independent Gaussian noise. In simulations of the Langevin dynamics we characterize the collective behavior of the ensemble in terms of its mean field and show that with the increase of noise the mean field displays a transition from a steady equilibrium to global oscillations and then, for sufficiently large noise, back to another equilibrium. In the course of this transition diverse regimes of collective dynamics ranging from periodic subthreshold oscillations to large-amplitude oscillations and chaos are observed. In order to understand the details and mechanisms of these noise-induced dynamics we consider the thermodynamic limit N-->infinity of the ensemble, and derive the cumulant expansion describing temporal evolution of the mean field fluctuations. In Gaussian approximation this allows us to perform the bifurcation analysis; its results are in good qualitative agreement with dynamical scenarios observed in the stochastic simulations of large ensembles.     

Vibrating superconducting island in a Josephson junction

We consider a combined nanomechanical-supercondcuting device that allows the Cooper pair tunneling to interfere with the mechanical motion of the middle superconducting island. Coupling of mechanical oscillations of a superconducting island between two superconducting leads to the electronic tunneling generates a supercurrent that is modulated by the oscillatory motion of the island. This coupling produces alternating finite and vanishing supercurrent as function of the superconducting phases. Current peaks are sensitive to the superconducting phase shifts relative to each other. The proposed device may be used to study the nanoelectromechanical coupling in case of superconducting electronics.