7‐Oxanorbornane and Norbornane Mimics of a Distorted β‐D‐Mannopyranoside: Synthesis and Evaluation as β‐Mannosidase Inhibitors

The racemic 7‐oxanorbornanyl and norbornanyl aminoalcohols 3, 4, 42, 45 , and 46 were synthesized and tested as snail β‐mannosidase inhibitors. The amino tetraol 3 was obtained from the known sulfonyl acrylate 9 and furan 10 . Esterification provided 11 that underwent an intramolecular Diels–Alder reaction to the 7‐oxanorbornene 12 . Reduction of 12 to 13 , desulfonylation, isopropylidenation, and cis‐dihydroxylation gave 16 . A second isopropylidenation to 17 , followed by debenzylation and a Mitsunobu–Gabriel reaction provided 19 that was deprotected via 20 to 3 . Diels–Alder cycloaddition of furfuryl acetate and maleic anhydride to 21 , followed by alcoholysis of the anhydride, cis‐dihydroxylation, isopropylidenation, and Barton decarboxylation gave the ester 25 . Deacetylation to 26 and a Mitsunobu–Gabriel reaction led to 27 that was transformed into the N‐Boc analogue 29 , reduced to the alcohol 30 , and deprotected to 4 . The 1‐aminonorbornane 5 was obtained from Thiele's Acid 31 . Diels–Alder cycloaddition of the cyclopentadiene obtained by thermolysis of the diester 32 , methanolysis of the resulting anhydride 33 , dihydroxylation, isopropylidenation, Barton decarboxylation, and Curtius degradation led to the benzyl carbamate 39 that was reduced to the alcohol 40 , transformed into the N‐Boc carbamate 41 , and deprotected to 5 . The alcohol 40 was also transformed into the benzylamine 42 , aniline 45 , and hydroxylamine 46 . Snail β‐mannosidase was hardly inhibited by 3, 4, 42, 45 , and 46 . Only the amino triol 5 proved a stronger inhibitor. The inhibition by 5 depends on the pH value (at pH 3.5: K_i = 1900 μM ; at pH 4.5: K_i = 340 μm; at pH 5.5: K_i = 110 μm). The results illustrate the strong dependence of the inhibition by bicyclic mimics upon the precise geometry and orientation of the amino group as determined by the scaffold. It is in keeping with the hypothesis that the reactive conformation imposed by snail β‐mannosidase is close to a ^1,4B/¹S₃.     

基于杯[4]芳烃和S-联萘酚的荧光传感器的合成及其对N-Boc保护谷氨酸阴离子的对应选择性识别性能研究

合成了一种基于杯[4]芳烃和S-联萘酚单元的新型手性大环受体4,并用荧光光谱和核磁氢谱研究了该受体与阴离子的键合性质。非线性曲线拟合结果表明受体4与N-Boc保护L-和D-谷氨酸阴离子都能通过多重氢键形成1:1的络合物,而且对N-Boc保护谷氨酸阴离子对映体显示了较好的对应选择性识别性能（Kass(L) / Kass(D) = 4.65）。不同的荧光响应表明受体4可以用作N-Boc保护谷氨酸阴离子的对应选择性的荧光化学传感器。     

7‐Halogenated 7‐Deazapurine 2′‐Deoxyribonucleosides Related to 2′‐Deoxyadenosine, 2′‐Deoxyxanthosine,and 2′‐Deoxyisoguanosine: Syntheses and Properties

A series of 7‐fluorinated 7‐deazapurine 2′‐deoxyribonucleosides related to 2′‐deoxyadenosine, 2′‐deoxyxanthosine, and 2′‐deoxyisoguanosine as well as intermediates 4b – 7b, 8, 9b, 10b , and 17b were synthesized. The 7‐fluoro substituent was introduced in 2,6‐dichloro‐7‐deaza‐9H‐purine ( 11a ) with Selectfluor (Scheme 1). Apart from 2,6‐dichloro‐7‐fluoro‐7‐deaza‐9H‐purine ( 11b ), the 7‐chloro compound 11c was formed as by‐product. The mixture 11b / 11c was used for the glycosylation reaction; the separation of the 7‐fluoro from the 7‐chloro compound was performed on the level of the unprotected nucleosides. Other halogen substituents were introduced with N‐halogenosuccinimides ( 11a → 11c – 11e ). Nucleobase‐anion glycosylation afforded the nucleoside intermediates 13a – 13e (Scheme 2). The 7‐fluoro‐ and the 7‐chloro‐7‐deaza‐2′‐deoxyxanthosines, 5b and 5c , respectively, were obtained from the corresponding MeO compounds 17b and 17c , or 18 (Scheme 6). The 2′‐deoxyisoguanosine derivative 4b was prepared from 2‐chloro‐7‐fluoro‐7‐deaza‐2′‐deoxyadenosine 6b via a photochemically induced nucleophilic displacement reaction (Scheme 5). The pK_a values of the halogenated nucleosides were determined (Table 3). ¹³C‐NMR Chemical‐shift dependencies of C(7), C(5), and C(8) were related to the electronegativity of the 7‐halogen substituents (Fig. 3). In aqueous solution, 7‐halogenated 2′‐deoxyribonucleosides show an approximately 70% S population (Fig. 2 and Table 1).     

Stereoselective Preparation of 3‐Amino‐2‐fluoro Carboxylic Acid Derivatives,and Their Incorporation in Tetrahydropyrimidin‐4(1H)‐ones,and in Open‐Chain and Cyclic β‐Peptides

The preparation of (2S,3S)‐ and (2R,3S)‐2‐fluoro and of (3S)‐2,2‐difluoro‐3‐amino carboxylic acid derivatives, 1 – 3 , from alanine, valine, leucine, threonine, and β³h‐alanine (Schemes 1 and 2, Table) is described. The stereochemical course of (diethylamino)sulfur trifluoride (DAST) reactions with N,N‐dibenzyl‐2‐amino‐3‐hydroxy and 3‐amino‐2‐hydroxy carboxylic acid esters is discussed (Fig. 1). The fluoro‐β‐amino acid residues have been incorporated into pyrimidinones ( 11 – 13 ; Fig. 2) and into cyclic β‐tri‐ and β‐tetrapeptides 17 – 19 and 21 – 23 (Scheme 3) with rigid skeletons, so that reliable structural data (bond lengths, bond angles, and Karplus parameters) can be obtained. β‐Hexapeptides Boc[(2S)‐β³hXaa(αF)]₆OBn and Boc[β³hXaa(α,αF₂)]₆‐OBn, 24 – 26 , with the side chains of Ala, Val, and Leu, have been synthesized (Scheme 4), and their CD spectra (Fig. 3) are discussed. Most compounds and many intermediates are fully characterized by IR‐ and ¹H‐, ¹³C‐ and ¹⁹F‐NMR spectroscopy, by MS spectrometry, and by elemental analyses, [α]_D and melting‐point values.     

Synthesis of the Anticodon Hairpin tRNAfMet Containing N‐{[9‐(β‐D‐Ribofuranosyl)‐9H‐purin‐6‐yl]carbamoyl}‐L‐threonine (=N6‐{{[(1S,2R)‐1‐Carboxy‐2‐hydroxypropyl]amino}carbonyl}adenosine,t6A)

As part of our studies on the structure of yeast ^tRNA_f^Met, we investigated the incorporation of N‐{[9‐(β‐D ‐ribofuranosyl)‐9H‐purin‐6‐yl]carbamoyl}‐L ‐threonine (t⁶A) in the loop of a RNA 17‐mer hairpin. The carboxylic function of the L ‐threonine moiety of t⁶A was protected with a 2‐(4‐nitrophenyl)ethyl group, and a (tert‐butyl)dimethylsilyl group was used for the protection of its secondary OH group. The 2′‐OH function of the standard ribonucleotide building blocks was protected with a [(triisopropylsilyl)oxy]methyl group. Removal of the base‐labile protecting groups of the final RNA with 1,8‐diazabicyclo[5.4.0]undec‐7‐ene (DBU) and then with MeNH₂ was done under carefully controlled conditions to prevent hydrolysis of the carbamate function, leading to loss of the L ‐threonine moiety.     

Towards the Synthesis of 1‐Deoxy‐1‐nitropiperidinoses

In the course of the first of several attempts to elaborate methods for the synthesis of 1‐nitropiperidinoses, lincosamine was transformed into lactam 6 via hemiacetal 1 , lactone 2 , amide 3 , oxo amide 4 , and its cyclic tautomer 5 . Treatment of the N‐Boc‐protected lactam oxime 9 , obtained from lactam 6 , with brominating agents failed to provide the bromonitroso carbamate 10 . The N‐Boc‐protected lactam 13 derived from 6 was reduced to hemiacetal 14 , but the corresponding N‐Boc‐aminooxime did not tautomerise to the C(1)‐hydroxylamine, and nitrone 17 , a potential precursor of the nitropiperidine 12 , was not formed. Oxidation of the anomeric azide 20 with HOF?MeCN failed to provide the expected nitropiperidine 21 . The phosphinimines 22 derived from 20 did not react with O₃. In the next approach to 1‐nitropiperidinoses, we treated the N‐Boc‐protected hemiacetal 25 , obtained from the known gluconolactam 23 with N‐benzylhydroxylamine. The resulting nitrone 26 exits in equilibrium with the anomeric N‐benzyl‐glycosylhydroxylamine that was oxidized to the anomeric nitrone 28 . Ozonolysis of 28 led to the hemiacetal 25 , resulting from the desired, highly reactive protected nitropiperidinose 29 , that was evidenced by an IR band at 1561 cm^?1. Similarly to the synthesis of nitrone 26 , reaction of the N‐tosyl‐protected hemiacetal 31 with N‐benzylhydroxylamine and oxidation provided the anomeric N‐benzylhydroxylamines 33 via the p‐toluenesulfonamido nitrone 32 . Their oxidation with MnO₂ led to the anomeric nitrone 34 . Ozonolysis of 34 as evidenced by ¹H‐NMR and ReactIR spectroscopy led to the highly reactive nitropiperidinose 35 . Like 29, 35 was transformed during workup, and only the hemiacetal 31 was isolated. The similarly prepared lincosamine‐derived nitrone 17 was subjected to ReactIR‐monitored ozonolysis that evidenced the formation of the protected nitropiperidinose 12 , but only led to the isolation of 14 . The facile transformation of the nitropiperidinoses to hemiacetals is rationalised by heterolysis of the anomeric C,N bond, recombination of the ion pair, and denitrosation of the resulting anomeric nitrite by a nucleophile. Attempts to convert the 1‐deoxy‐1‐nitropiperidinose 35 to uloses 43 by base‐catalysed Michael additions or Henry reactions were unsuccessful.     

Novel AB crosslinked polymer networks from telechelic 4‐vinylbenzyl carbamate terminated polyurethanes and different vinyl monomers

Novel AB crosslinked polymer (ABCP) networks were synthesized from telechelic 4‐vinylbenzyl carbamate terminated polyurethanes and monomers such as styrene, 4‐vinylpyridine, methyl methacrylate and butyl acrylate. Telechelic 4‐vinylbenzyl carbamate terminated polyurethanes were synthesized from polypropylene glycol‐based NCO‐terminated polyurethane and vinylbenzyl alcohol. Effect of changing the molecular weight of polypropylene glycol on the static and dynamic mechanical properties of ABCP networks from polyurethane‐polymethyl methacrylate was studied in detail. Dynamic mechanical thermal analysis results show that polymethyl methacrylate and polystyrene‐based ABCPs have good damping over a broad temperature range. ABCP networks prepared from 4‐vinylbenzyl carbamate terminated polyurethane and different monomers such as methyl methacrylate, butyl acrylate and styrene exhibit single tan δ_max value which implies excellent interlocking between the two polymers present in the ABCP networks. Static mechanical studies showed that methyl methacrylate and styrene‐based ABCP networks exhibit better tensile properties compared to other ABCP networks from butyl acrylate and 4‐vinyl pyridine monomers. Thermogravimetric analysis results revealed that the ABCP networks showed an improved thermal stability. Copyright © 2009 John Wiley & Sons, Ltd.     

Isotopically Labelled and Unlabelled β‐Peptides with Geminal Dimethyl Substitution in 2‐Position of Each Residue: Synthesis and NMR Investigation in Solution and in the Solid State

The preparation of (S)‐β^2,2,3‐amino acids with two Me groups in the α‐position and the side chains of Ala, Val, and Leu in the β‐position (double methylation of Boc‐β‐HAla‐OMe, Boc‐β‐Val‐OMe, and Boc‐β‐Leu‐OMe, Scheme 2) is described. These β‐amino acids and unlabelled as well as specifically ¹³C‐ and ¹⁵N‐labelled 2,2‐dimethyl‐3‐amino acid (β^2,2‐HAib) derivatives have been coupled in solution (Schemes 1, 3 and 4) to give protected (N‐Boc, C‐OMe), partially protected (N‐Boc/C‐OH, N‐H/C‐OMe), and unprotected β^2,2‐ and β^2,2,3‐hexapeptides, and β^2,2‐ and β^2,2,3‐heptapeptides 1 – 7 . NMR Analyses in solution (Tables 1 and 2, and Figs. 2–4) and in the solid state (2D‐MAS NMR measurements of the fully labelled Boc‐(β^2,2‐HAib)₆‐OMe ([¹³C₃₀, ¹⁵N₆]‐ 1e ; Fig. 5), and TEDOR/REDOR NMR investigations of mixtures (Fig. 6) of the unlabelled Ac‐(β^2,2‐HAib)₇‐OMe ( 4 ) and of a labelled derivative ([¹³C₄,¹⁵N₂]‐ 5 ; Figs. 7–11, and 19), a molecular‐modeling study (Figs. 13–15), and a search in the Cambridge Crystallographic Data Base (Fig. 16) allow the following conclusions: i) there is no evidence for folding (helix or turn) or for aggregation to sheets of the geminally dimethyl substituted peptide chains in solution; ii) there are distinct conformational preferences of the individual β^2,2‐ and β^2,2,3‐amino acid residues: close to eclipsing around the C(O) C(Me₂(CHR)) bond (τ_1,2), almost perfect staggering around the C(2) C(3) ethane bond (τ_2,3), and antiperiplanar arrangement of H(C3) and H(N) (τ_3,N; Fig. 12) in the solid state; iii) the β^2,2‐peptides may be part of a turn structure with a ten‐membered H‐bonded ring; iv) the main structure present in the solid state of F₃CCO(β^2,2‐HAib)₇‐OMe is a nonfolded chain (>30 Å between the termini and >20 Å between the N‐terminus and the CH₂ group of residue 5) with all CO bonds in a parallel alignment (±10°). With these structural parameters, a simple modelling was performed producing three (maybe four) possible chain geometries: one fully extended, two with parallel peptide planes (with zick‐zack and crankshaft‐type arrangement of the peptide bonds), and (possibly) a fourth with meander‐like winding ( D – G in Figs. 17 and 18).     

Synthesis,CD Spectra,and Enzymatic Stability of β2‐Oligoazapeptides Prepared from (S)‐2‐Hydrazino Carboxylic Acids Carrying the Side Chains of Val,Ala, and Leu

β‐Peptides offer the unique possibility to incorporate additional heteroatoms into the peptidic backbone (Figs. 1 and 2). We report here the synthesis and spectroscopic investigations of β²‐peptide analogs consisting of (S)‐3‐aza‐β‐amino acids carrying the side chains of Val, Ala, and Leu. The hydrazino carboxylic acids were prepared by a known method: Boc amidation of the corresponding N‐benzyl‐L ‐α‐amino acids with an oxaziridine (Scheme 1). Couplings and fragment coupling of the 3‐benzylaza‐β²‐amino acids and a corresponding tripeptide (N‐Boc/C‐OMe strategy) with common peptide‐coupling reagents in solution led to β²‐di, β²‐tri‐, and β²‐hexaazapeptide derivatives, which could be N‐debenzylated ( 4 – 9 ; Schemes 2–4). The new compounds were identified by optical rotation, and IR, ¹H‐ and ¹³C‐NMR, and CD spectroscopy (Figs. 4 and 5) and high‐resolution mass spectrometry, and, in one case, by X‐ray crystallography (Fig. 3). In spite of extensive measurements under various conditions (temperatures, solvents), it was not possible to determine the secondary structure of the β²‐azapeptides by NMR spectroscopy (overlapping and broad signals, fast exchange between the two types of NH protons!). The CD spectra of the N‐Boc and C‐OMe terminally protected hexapeptide analog 9 in MeOH and in H₂O (at different pH) might arise from a (P)‐3₁₄‐helical structure. The N‐Boc‐β²‐tri and N‐Boc‐β²‐hexaazapeptide esters, 7 and 9 , were shown to be stable for 48 h against the following peptidases: pronase, proteinase K, chymotrypsin, trypsin, carboxypeptidase A, and 20S proteasome.     

Differentiation of Boc‐protected α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptide positional isomers by electrospray ionization tandem mass spectrometry

Two new series of Boc‐N‐α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptides containing repeats of L ‐Ala‐δ⁵‐Caa/δ⁵‐Caa‐L ‐Ala and β³‐Caa‐δ⁵‐Caa/δ⁵‐Caa‐β³‐Caa (L ‐Ala = L ‐alanine, Caa = C‐linked carbo amino acid derived from D ‐xylose) have been differentiated by both positive and negative ion electrospray ionization (ESI) ion trap tandem mass spectrometry (MS/MS). MSⁿ spectra of protonated isomeric peptides produce characteristic fragmentation involving the peptide backbone, the Boc‐group, and the side chain. The dipeptide positional isomers are differentiated by the collision‐induced dissociation (CID) of the protonated peptides. The loss of 2‐methylprop‐1‐ene is more pronounced for Boc‐NH‐L ‐Ala‐δ‐Caa‐OCH₃ (1), whereas it is totally absent for its positional isomer Boc‐NH‐δ‐Caa‐L ‐Ala‐OCH₃ (7), instead it shows significant loss of t‐butanol. On the other hand, second isomeric pair shows significant loss of t‐butanol and loss of acetone for Boc‐NH‐δ‐Caa‐β‐Caa‐OCH₃ (18), whereas these are insignificant for its positional isomer Boc‐NH‐β‐Caa‐δ‐Caa‐OCH₃ (13). The tetra‐ and hexapeptide positional isomers also show significant differences in MS² and MS³ CID spectra. It is observed that ‘b’ ions are abundant when oxazolone structures are formed through five‐membered cyclic transition state and cyclization process for larger ‘b’ ions led to its insignificant abundance. However, b₁⁺ ion is formed in case of δ,α‐dipeptide that may have a six‐membered substituted piperidone ion structure. Furthermore, ESI negative ion MS/MS has also been found to be useful for differentiating these isomeric peptide acids. Thus, the results of MS/MS of pairs of di‐, tetra‐, and hexapeptide positional isomers provide peptide sequencing information and distinguish the positional isomers. Copyright © 2010 John Wiley & Sons, Ltd.     

Synthesis and Characterization of 2‐Mono‐ and 1,2‐Diaminocarba‐closo‐dodecaborates M[1‐R‐2‐H2N‐closo‐CB11H10] (R=H,Ph, H2N,CyHN)

The first primary 2‐aminocarba‐closo‐dodecaborates [1‐R‐2‐H₂N‐closo‐CB₁₁H₁₀]^? (R=H ( 1 ), Ph ( 2 )) have been synthesized by insertion reactions of (Me₃Si)₂NBCl₂ into the trianions [7‐R‐7‐nido‐CB₁₀H₁₀]^3?. The difunctionalized species [1,2‐(H₂N)₂‐closo‐CB₁₁H₁₀] ( 3 ) and 1‐CyHN‐2‐H₃N‐closo‐CB₁₁H₁₀ (H‐ 4 ) have been prepared analogously from (Me₃Si)₂NBCl₂ and 7‐H₃N‐7‐nido‐CB₁₀H₁₂. In addition, the preparation of [Et₄N][1‐H₂N‐2‐Ph‐closo‐CB₁₁H₁₀] ([Et₄N]‐ 5 ) starting from PhBCl₂ and 7‐H₃N‐7‐nido‐CB₁₀H₁₂ is described. Methylation of the [1‐Ph‐2‐H₂N‐closo‐CB₁₁H₁₀]^? ion ( 2 ) to produce 1‐Ph‐2‐Me₃N‐closo‐CB₁₁H₁₀ ( 6 ) is reported. The crystal structures of [Et₄N]‐ 2 , [Et₄N]‐ 5 , and 6 were determined and the geometric parameters were compared to theoretical values derived from DFT and ab initio calculations. All new compounds were studied by NMR, IR, and Raman spectroscopy, MALDI mass spectrometry, and elemental analysis. The discussion of the experimental NMR chemical shifts and of selected vibrational band positions is supported by theoretical data. The thermal properties were investigated by differential scanning calorimetry (DSC). The pK_a values of 2‐H₃N‐closo‐CB₁₁H₁₁ (H‐ 1 ), 1‐H₃N‐closo‐CB₁₁H₁₀ (H‐ 7 ), and 1,2‐(H₃N)₂‐closo‐CB₁₁H₁₀ (H₂‐ 3 ) were determined by potentiometric titration and by NMR studies. The experimental results are compared to theoretical data (DFT and ab initio). The basicities of the aminocarba‐closo‐dodecaborates agree well with the spectroscopic and structural properties.     

Synthesis of new proton‐ionizable crown ether compounds containing substituted lh‐pyridin‐4‐one subcyclic units

Five novel pyridono‐18‐crown‐6 ( 10‐14 ) and two new benzyloxy‐substituted pyridino‐18‐crown‐6 ( 15 and 16 ) ligands have been prepared. By the catalytic hydrogenative removal of the benzyl group from the benzyloxy moiety at position 4 of the pyridine ring of 15 and 16 , pyridono‐18‐crown‐6 ethers 5 and 12 were obtained. These ligands were transformed to their 3,5‐dibromo ( 10 and 13 ) and 3,5‐dinitro derivatives ( 11 and 14 ) by treatment with bromine in methylene chloride and nitric acid in acetic anhydride, respectively. The latter proton‐ionizable crown ethers have pK_avalues of about 7.5 for 10 and 13 and 4.5 for 11 and 14 . Thus, they are good candidates for complexation and proton‐coupled transport of selected cations.     

Safe,Low‐Cost,Fast‐Kinetics and Low‐Strain Inorganic‐Open‐Framework Anode for Potassium‐Ion Batteries

A key challenge for potassium‐ion batteries is to explore low‐cost electrode materials that allow fast and reversible insertion of large‐ionic‐size K⁺. Here, we report an inorganic‐open‐framework anode (KTiOPO₄), which achieves a reversible capacity of up to 102 mAh g^?1 (307 mAh cm^?3), flat voltage plateaus at a safe average potential of 0.82 V (vs. K/K⁺), a long lifespan of over 200 cycles, and K⁺‐transport kinetics ≈10 times faster than those of Na‐superionic conductors. Combined experimental analysis and first‐principles calculations reveal a charge storage mechanism involving biphasic and solid solution reactions and a cell volume change (9.5 %) even smaller than that for Li⁺‐insertion into graphite (≈10 %). KTiOPO₄ exhibits quasi‐3D lattice expansion on K⁺ intercalation, enabling the disintegration of small lattice strain and thus high structural stability. The inorganic open‐frameworks may open a new avenue for exploring low‐cost, stable and fast‐kinetic battery chemistry.     

Safe,Low‐Cost,Fast‐Kinetics and Low‐Strain Inorganic‐Open‐Framework Anode for Potassium‐Ion Batteries

A key challenge for potassium‐ion batteries is to explore low‐cost electrode materials that allow fast and reversible insertion of large‐ionic‐size K⁺. Here, we report an inorganic‐open‐framework anode (KTiOPO₄), which achieves a reversible capacity of up to 102 mAh g^?1 (307 mAh cm^?3), flat voltage plateaus at a safe average potential of 0.82 V (vs. K/K⁺), a long lifespan of over 200 cycles, and K⁺‐transport kinetics ≈10 times faster than those of Na‐superionic conductors. Combined experimental analysis and first‐principles calculations reveal a charge storage mechanism involving biphasic and solid solution reactions and a cell volume change (9.5 %) even smaller than that for Li⁺‐insertion into graphite (≈10 %). KTiOPO₄ exhibits quasi‐3D lattice expansion on K⁺ intercalation, enabling the disintegration of small lattice strain and thus high structural stability. The inorganic open‐frameworks may open a new avenue for exploring low‐cost, stable and fast‐kinetic battery chemistry.     

Synthesis and Self‐Assembly of NCN‐Pincer Pd‐Complex‐Bound Norvalines

The NCN‐pincer Pd‐complex‐bound norvalines Boc‐D /L ‐[PdCl(dpb)]Nva‐OMe ( 1 ) were synthesized in multigram quantities. The molecular structure and absolute configuration of 1 were unequivocally determined by single‐crystal X‐ray structure analysis. The robustness of 1 under acidic/basic conditions provides a wide range of N‐/C‐terminus convertibility based on the related synthetic transformations. Installation of a variety of functional groups into the N‐/C‐terminus of 1 was readily carried out through N‐Boc‐ or C‐methyl ester deprotection and subsequent condensations with carboxylic acids, R¹COOH, or amines, R²NH₂, to give the corresponding N‐/C‐functionalized norvalines R¹‐D /L ‐[PdCl(dpb)]Nva‐R² 2 – 9 . The dipeptide bearing two Pd units 10 was successfully synthesized through the condensation of C‐free 1 with N‐free 1 . The robustness of these Pd‐bound norvalines was adequately demonstrated by the preservation of the optical purity and Pd unit during the synthetic transformations. The lipophilic Pd‐bound norvalines L ‐ 2 , Boc‐L ‐[PdCl(dpb)]Nva‐NH‐n‐C₁₁H₂₃, and L ‐ 4 , n‐C₄H₉CO‐L ‐[PdCl(dpb)]Nva‐NH‐n‐C₁₁H₂₃, self‐assembled in aromatic solvents to afford supramolecular gels. The assembled structures in a thermodynamically stable single crystal of L ‐ 2 and kinetically stable supramolecular aggregates of L ‐ 2 were precisely elucidated by cryo‐TEM, WAX, SAXS, UV/Vis, IR analyses, and single‐crystal X‐ray crystallography. An antiparallel β‐sheet‐type aggregate consisting of an infinite one‐dimensional hydrogen‐bonding network of amide groups and π‐stacking of PdCl(dpb) moieties was observed in the supramolecular gel fiber of L ‐ 2 , even though discrete dimers are assembled through hydrogen bonding in the thermodynamically stable single crystal of L ‐ 2 . The disparate DSC profiles of the single crystal and xerogel of L ‐ 2 indicate different thermodynamics of the molecular assembly process.     

Ethyl N‐[2‐(hydroxy­acetyl)­phenyl]­carbamate,ethyl N‐[2‐(hydroxy­acetyl)‐4‐iodo­phenyl]­carbamate and ethyl N‐[2‐(hydroxy­acetyl)‐4‐methyl­phenyl]­carbamate

In ethyl N‐[2‐(hydroxy­acetyl)phenyl]carbamate, C₁₁H₁₃NO₄, all of the non‐H atoms lie on a mirror plane in the space group Pnma; the mol­ecules are linked into simple chains by a single C—H⋯O hydrogen bond. The mol­ecules of ethyl N‐[2‐(hydroxy­acetyl)‐4‐iodo­phenyl]carbamate, C₁₁H₁₂INO₄, are linked into sheets by a combination of O—H⋯I and C—H⋯O hydrogen bonds and a dipolar I⋯O contact. Ethyl N‐­[2‐(hydroxy­acetyl)‐4‐methyl­phenyl]carbamate, C₁₂H₁₅NO₄, crystallizes with Z′ = 2 in the space group P; pairs of mol­ecules are weakly linked by an O—H⋯O hydrogen bond and these aggregates are linked into chains by two independent aromatic π–π stacking inter­actions.     

Oligonucleotides Containing 7‐Deaza‐2′‐deoxyxanthosine: Synthesis,Base Protection,and Base‐Pair Stability

Oligonucleotides incorporating 7‐deaza‐2′‐deoxyxanthosine ( 3 ) and 2′‐deoxyxanthosine ( 1 ) were prepared by solid‐phase synthesis using the phosphoramidites 6 – 9 and 16 which were protected with allyl, diphenylcarbamoyl, or 2‐(4‐nitrophenyl)ethyl groups. Among the various groups, only the 2‐(4‐nitrophenyl)ethyl group was applicable to 7‐deazaxanthine protection being removed with 1,8‐diazabicyclo[5.4.0]undec‐7‐ene (DBU) by β‐elimination, while the deprotection of the allyl residue with Pd⁰ catalyst or the diphenylcarbamoyl group with ammonia failed. Contrarily, the allyl group was found to be an excellent protecting group for 2′‐deoxyxanthosine ( 1 ). The base pairing of nucleoside 3 with the four canonical DNA constituents as well as with 3‐bromo‐1‐(2‐deoxy‐β‐D ‐erythro‐pentofuranosyl)‐1H‐pyrazolo[3,4‐d]pyrimidine‐4,6‐diamine ( 4 ) within the 12‐mer duplexes was studied, showing that 7‐deaza‐2′‐deoxyxanthosine ( 3 ) has the same universal base‐pairing properties as 2′‐deoxyxanthosine ( 1 ). Contrary to the latter, it is extremely stable at the N‐glycosylic bond, while compound 1 is easily hydrolyzed under slightly acidic conditions. Due to the pK_a values 5.7 ( 1 ) and 6.7 ( 3 ), both compounds form monoanions under neutral conditions (95% for 1 ; 65% for 3 ). Although both compounds form monoanions at pH 7.0, pH‐dependent T_m measurements showed that the base‐pair stability of 7‐deaza‐2′‐deoxyxanthosine ( 3 ) with dT is pH‐independent. This indicates that the 2‐oxo group is not involved in base‐pair formation.     

Diastereoselective Addition of Allyl Reagents to Variously N‐Monoprotected and N,N‐Diprotected L‐Alaninals

Diastereoselective C₃‐elongation processes of N‐Boc‐, N‐Z‐, N‐Bn‐N‐Boc‐, and N‐Bn‐N‐Z‐L ‐alaninals (Boc=^tBuOCO, Z=PhCH₂OCO, Bn=PhCH₂) using various allyl reagents, such as allyl bromide in the presence of Zn/aqueous NH₄Cl solution, of SnCl₂⋅2 H₂O/NaI or of Mg/CuCl₂⋅2 H₂O, as well as allyltrichlorosilane, are described. A substantially different influence of the N‐protecting groups replacing either one or two amino protons was observed, allowing the selective synthesis of either the syn‐ or anti‐diastereoisomer as a major product.     

Structure‐Reactivity Relationships as Probes to Acetylcholinesterase Inhibition Mechanisms by Aryl Carbamates. II. Hammett‐Taft Cross‐Interaction Correlations

Substituted phenyl‐N‐butyl carbamates ( 1 ) and p‐nitrophenyl‐N‐substituted carbamates ( 2 ) are characterized as “pseudo‐pseudo‐substrate” inhibitors of acetylcholinesterase. Since the inhibitors protonate in pH 7.0 buffer solution, the virtual inhibition constants (K_i's) of the protonated inhibitors can be calculated from the equation, ‐logK_i' = ‐logK_i ‐ pK_a + 14. The ‐logK_i' and logk_c values for acetylcholinesterase inhibitions by carbamates 1 correlate with the Hammett equation (log(k/k₀) = ρσ); moreover, those by carbamates 2 correlate with the Taft equation (log(k/k₀) = ρ* σ*). With modified Hammett‐Taft cross‐interaction variations, multiple linear regressions of the ‐logK_i' and logk_c values of carbamates 1 and 2 give good correlations, and the cross‐interaction constants (ρ_XR) are 0.5 and 0.0, respectively. The ρ_XR value of 0.5 indicates that the carbamate O‐C(O)‐N‐R geometries for the transition states that lead to enzyme‐carbamate tetrahedral intermediates are all pseudo‐trans conformations. Therefore, the carbamate moiety of the inhibitors stretches along the active site gorge of the enzyme but does not bind in the acyl binding site pocket of the enzyme. Overall, the carbamate O‐C(O)‐N‐R geometries for carbamates 1 and 2 , protonated carbamates 1 and 2 , and the tetrahedral intermediate are all retained in pseudo‐trans conformations. The ρ_XR value of 0.0 suggests that the transition states that lead to the carbamyl enzymes are breaking C‐O bonds and are excluding the leaving groups, substituted phenols.     

Structure‐Based Design of Platinum(II) Complexes as c‐myc Oncogene Down‐Regulators and Luminescent Probes for G‐Quadruplex DNA

A series of platinum(II) complexes with tridentate ligands was synthesized and their interactions with G‐quadruplex DNA within the c‐myc gene promoter were evaluated. Complex 1 , which has a flat planar 2,6‐bis(benzimidazol‐2‐yl)pyridine (bzimpy) scaffold, was found to stabilize the c‐myc G‐quadruplex structure in a cell‐free system. An in silico G‐quadruplex DNA model has been constructed for structure‐based virtual screening to develop new Pt^II‐based complexes with superior inhibitory activities. By using complex 1 as the initial structure for hit‐to‐lead optimization, bzimpy and related 2,6‐bis(pyrazol‐3‐yl)pyridine (dPzPy) scaffolds containing amine side‐chains emerge as the top candidates. Six of the top‐scoring complexes were synthesized and their interactions with c‐myc G‐quadruplex DNA have been investigated. The results revealed that all of the complexes have the ability to stabilize the c‐myc G‐quadruplex. Complex 3 a ([Pt^II L2R ] ⁺ ; L2 =2,6‐bis[1‐(3‐piperidinepropyl)‐1H‐enzo[d]imidazol‐2‐yl]pyridine, R =Cl) displayed the strongest inhibition in a cell‐free system (IC₅₀=2.2 μM ) and was 3.3‐fold more potent than that of 1 . Complexes 3 a and 4 a ([Pt^II L3R ]⁺; L3 =2,6‐bis[1‐(3‐morpholinopropyl)‐1H‐pyrazol‐3‐yl]pyridine, R =Cl) were found to effectively inhibit c‐myc gene expression in human hepatocarcinoma cells with IC₅₀ values of ≈17 μM , whereas initial hit 1 displayed no significant effect on gene expression at concentrations up to 50 μM . Complexes 3 a and 4 a have a strong preference for G‐quadruplex DNA over duplex DNA, as revealed by competition dialysis experiments and absorption titration; 3 a and 4 a bind G‐quadruplex DNA with binding constants (K) of approximately 10⁶–10⁷ dm³ mol^?1, which are at least an order of magnitude higher than the K values for duplex DNA. NMR spectroscopic titration experiments and molecular modeling showed that 4 a binds c‐myc G‐quadruplex DNA through an external end‐stacking mode at the 3′‐terminal face of the G‐quadruplex. Intriguingly, binding of c‐myc G‐quadruplex DNA by 3 b is accompanied by an increase of up to 38‐fold in photoluminescence intensity at λ_max=622 nm.