Energy dependence of the fragmentation of some isomeric [C6H12]+˙ ions

The charge exchange mass spectra of 14 C₆H₁₂ isomers have been determined using [CS₂]^+˙, [COS]^+˙, [Xe]^+˙, [CO]^+˙, [N₂]^+˙ and [Ar]^+˙ as the major reactant ions covering the recombination energy range from ∼10.2 eV to ∼15.8 eV. From the charge exchange data breakdown graphs have been constructed expressing the energy dependence of the fragmentation of the isomeric [C₆H₁₂]^+˙ molecular ions. The electron impact mass spectra are discussed in relation to these breakdown graphs and approximate internal energy distribution functions derived from photoelectron spectra.     

Structural characterization of isomeric triazolocoumarins by high- and low-energy collision spectrometry of M+˙, [M + H]+ and [M − H]− species

Two monometayl- and four dimethyl-triazolocoumarin isomers were characterized by their electron impact mass spectra and by low-energy collision experiments performed on molecular ions M⁺˙ and other fragment ions with an ion-trap mass spectrometer. High-energy collision-activated dissociation measurements were performed on the protonated [M + H]⁺ and deprotonated [M ? H]^? molecular ion obtained by fast atom bombardment and M⁺˙ species produced by electron impact ionization on a double-focusing, reverse-geometry instrument. The data obtained allowed unequivocal structural identification of all the compounds investigated.     

Comparative studies of MCs+-SIMS and e?-beam SNMS for quantitative analysis of bulk materials and layered structures

For the quantification of heterostructure depth profiles the knowledge of relative sensitivity factors (RSF) and the influence of matrix effects on the measured profiles is necessary. Matrix dependencies of the measured ion intensities have been investigated for sputtered neutral mass spectrometry (SNMS) and MCs⁺-SIMS. The use of Cs as primary ions for SNMS is advantageous compared to Ar because the depth resolution is improved without changing RSFs determined under Ar bombardment. No significant amount of molecules has been found in the SNMS spectra under Cs bombardment. Using MCs⁺-SIMS the RSFs are matrix dependent. An improvement of depth resolution can be achieved by biasing the sample against the primary ion beam for SNMS due to a reduction of the net energy of the primary ions and a resulting more gracing impact angle.     

Ion chemistry of phthalamic acids. 2—mass spectral retrosynthesis of phthalanilic acids and structure analysis of [C8H6NO2]+ ions from N-cyclohexylphthalamic acid and [MH]+ of N-cyclohexylphthalimide

Under electron impact o-phthalanilic acids show the retrosynthetic reaction previously described for other phthalamic acids. As primary amine derivatives they undergo thermal and electron impact induced water loss. Like the molecular ions of the related phthalimides, their [M? H₂O]^+˙ do not give [C₈H₆NO₂]⁺ fragments, which are obtained from the N-cyclohexyl derivative. The structure of such fragments is investigated by collisionally activated mass analysed ion kinetic energy spectra, and compared with the [MH]⁺ of phthalimide, obtained by chemical ionization with CH₄ or NH₃ and assumed to be possible models.     

Mass spectra of aliphatic dicarboxylic acids and their dimethyl esters: Cyclic structures for the [M − H2O]+˙ ions from the diacids and [M − MeOH]+˙ ions from the dimethyl esters

Methyl 2-oxocycIoalkane carboxylate structures are proposed lor the [M ? MeOH]^+˙ ions from dimethyl adipate, pimelate, suberate and azelate. This proposal is based on a comparison of the metastable ion mass spectra and the kinetic energy releases for the major fragmentation reaction of these species with the same data for the molecular ions of authentic cyclic β-keto esters. The mass spectra of α,α,α′,α′-d₄-pimelic acid and its dimethyl ester indicate that the α-hydrogens are involved only to a minor extent in the formation of [M ? ROH]^+˙ and [M ? 2ROH]^+˙ ions, while these α-hydrogens are involved almost exclusively in the loss of ROH from the [M ? RO˙]⁺ ions (R = H or CH₃). The molecules XCO(CH₂)₇COOMe (X = OH, Cl) form abundant ions in their mass spectra with the same structure as the [M ? 2MeOH]^+˙ ions from dimethyl azelate.     

Isomer differentiation in 7, 12-dimethylbenz[a]anthracene-pyridine adducts by fast atom bombardment tandem mass spectrometry

Three isomeric 7,12-dL-nethylbenz[α]anthracene-pyridine adduct salts, namely.. the 5-N-pyridinium-7,12-dimethylbenz[α]anthracene perchlorate, the 7-N-pyridiniummethylene-12methylbenz[ α]anthracene picrate, and the 7-methyl-12-N-pyridiniummethylenebenz[ α]anthracene picrate, were studied by fast atom bombardment tandem mass spectrometry using high energy collisional-activated dissociation (CAD). The CAD mass spectra of the molecular cations and the (M – pyridine)⁺ ions allow one to distinguish positional isomers on the basis of daughter ion peak height ratios. The differences in the CAD mass spectra of the (M – pyridine)⁺ ions are probably due in part to formation of isomer-specific fused-ring tropyliumions.     

Formation of doubly positively charged diatomic ions of Mo2(2+) produced by Ar+ sputtering of an Mo metal surface

Long-lived metastable doubly positively charged diatomic ions of Mo2(2+) have been produced by Ar+ bombardment of a molybdenum metal surface. These exotic molecular dications, such as for example 92,95Mo2(2+) at m/z 93.5, could be observed in positive ion mass spectra for ion flight times of approximately 17 micros in a Cameca IMS-3f secondary ion mass spectrometer, when the ion extraction field was adjusted for detection of ions that are formed in the gas phase several micrometers in front of the sputtered surface. Mo2(2+) was observed at high primary current densities for projectile ions of Ar+, but could not be detected under very similar bombarding conditions for projectile ions of Xe+. Such a dependence of ion production by inert gas sputtering on the primary ion species [ionization energies: IP1(Ar) = 15.76 eV and IP1(Xe) = 12.13 eV] is unusual. It is shown that formation of Mo2(2+) dications takes place by resonant charge transfer in grazing gas-phase collisions between incoming projectile ions of Ar+ and sputtered molecular ions of Mo2+. The efficiency for such a resonant electron capture (Mo2+ + Ar+ --> Mo2(2+) + Ar) is of the order of 10(-5) for the bombarding conditions in our mass spectrometer and corresponds to a cross section of a few 10(-15) cm2.     

Fast atom bombardment (FAB) mass spectrometry of piperidine N-oxide derivatives and free radical quenching under FAB conditions

Mechanisms are proposed for the formation of M⁺, [M + 2H]⁺ and [M + 3H]⁺ ions in the fast atom bombardment (FAB) mass spectra of 4-(2,2,6,6-tetramethyl-1-oxyl)-piperidol and its carboxylates. Free radical quenching induced by the fast atom beam has been observed. The effects of temperature on the radical quenching and of acid on the FAB mass spectra are discussed. The experiment showed that the volatile liquid samples with vapour pressures higher than that for glycerol produced M⁺ even-electron molecular ions, and the FAB mass spectra were similar to the corresponding electron ionization mass spectra. For the solid samples, it was found that the free radicals were quenched during the FAB process so that the mononitroxide and dinitroxide compounds produced [M + 2H]⁺ and [M + 3H]⁺ ions, respectively. Further experiments showed that the intensities and stabilities of [M + 2H]⁺ and [M + 3H]⁺ ions could be improved by addition of acids.     

Structural and substituent effects on [M]+. vs. [MH]+ formation in fast atom bombardment mass spectra of simple organic compounds

The peak intensity ratios of [M]^+. vs. [MH]⁺ were measured in the fast atom bombardment (FAB) mass spectra of readily available test compounds with 3-nitrobenzyl alcohol as the matrix. For simple aromatic amines, the ratio increases as the ionization energy of the substrate decreases. 4-Substituted benzophenones showed preferential formation of [MH]⁺ ions, regardless of the nature of the substituents. This is probably due to the fact that the benzophenoes have carbonyl groups which can form hydrogen bonds with the matrix molecule. The peak intensity ratio is roughly proportional to the Hammett σ^+. Among 4-substituted biphenyls, both bromo and chloro substituents afforded abnormally high peak intensity ratios. The effects of the substituents in these compounds are discussed semi-quantitatively in terms of the Hammett correlation and the hard and soft acids and bases principle. The mechanism of ion formation in FAB and chemical ionization (CI) ion sources appeared to be different because some of the compounds studied showed an intense [M]^+. peak with a relatively weak [MH]⁺ peak in FAB spectra but exhibited a strong [MH]⁺ peak in ordinary CI spectra.     

Use of fast atom bombardment mass spectrometry for the characterization of nitroaromatic isomers

Positive and negative ion fast atom bombardment (FAB) mass spectra of some monosubstituted nitroaromatic isomers are reported. Generally ions carresponding to [M + H]⁺ and M⁺ are observed in the positive ion FAB spectra; ions such as [M ? H] ^? and M^?˙ are observed in the negative ion FAB spectra. The use of FAB mass spectra to distinguish the isomers is discussed. Comparisons of FAB, chemical ionization and electron impact mass spectra of the same isomers (wherever possible) are reported. The structural information obtained in the negative ion FAB spectra complement those obtained in the positive ion FAB spectra.     

Collisional activation spectra of [M + Li]+, [M + Na]+ and [M + K]+ ions formed by field desorption of some monosaccharides

The collisional activation spectra of monosaccharide ions formed by [Li]⁺, [Na]⁺ and [K]⁺ ion attachment under field desorption conditions are reported. It is shown that the elimination of the alkali ions is determined by the alkali ion affinities of the molecules (M) and competes with a fragmentation of M which is almost independent of the alkali ion attached. Correspondingly the alkali ion is predominantly retained in the fragment ions. The usefulness of this method for the differentiation of underivatized isomers is demonstrated.     

Characterization of five [C4H7O]+ Ion structures. Fragmentation of the 2-pentanone molecular ion

The [C₄H₇0]⁺ ions [CH₂?CH? C(?OH)CH₃]⁺ (1), [CH₃CH?CH? C(?OH)H]⁺ (2), [CH₂?C(CH₃)C(?OH)H]⁺ (3), [Ch₃CH₂CH₂C?O]⁺ (4) and [(CH₃)₂CHC?O]⁺ (5) have been characterized by their collision-induced dissociation (CID) mass spectra and charge stripping mass spectra. The ions 1–3 were prepared by gas phase protonation of the relevant carbonyl compounds while 4 and 5 were prepared by dissociative electron impact ionization of the appropriate carbonyl compounds. Only 2 and 3 give similar spectra and are difficult to distinguish from each other; the remaining ions can be readily characterized by either their CID mass spectra or their charge stripping mass spectra. The 2-pentanone molecular ion fragments by loss of the C(1) methyl and the C(5) methyl in the ratio 60:40 for metastable ions; at higher internal energies loss of the C(1) methyl becomes more favoured. Metastable ion characteristics, CID mass spectra and charge stripping mass spectra all show that loss of the C(1) methyl leads to formation of the acyl ion 4, while loss of the C(5) methyl leads to formation of protonated vinyl methyl ketone (1). These results are in agreement with the previously proposed potential energy diagram for the [C₅H₁₀O]⁺˙ system.     

Formation and fragmentation of the [M + Na]+ ion of glycosides in fast atom bombardment mass spectrometry

Positive-ion fast atom bombardment (FAB) mass spectra of flavonol and steroid glycosides with sodium chloride added showed well known characteristic features; of the appearance of [M + Na]⁺ peaks, disappearance of [M + H]⁺ peaks and a significant decrease in the peak heights of fragment ions. Compared with the features in the FAB mass spectra of crown ethers with addition of salt, and above features suggest a complexation between Na⁺ and the glycosides in matrix solution. The B/E-constant linked scanning technique was used to obtain structural information of the [M + Na]⁺ ion of the glycosides. The B/E spectra gave the daughter-ion peaks, suggesting that coordination of Na⁺ with the biosides and triosides occurs at the sugar moiety, whereas the coordination with the monoglycosides occurs at the aglycone moiety, except for monoglycosides in which the aglycone moiety does not contain significant oxygen functional groups such as OH and CO.     

The [M?OH]+ ions of m- and p-ethylnitrobenzene: A common structure?

The structures of the [M? OH]⁺ ions of m- and pethylnitrobenzene have been compared by measurements of metastable ion spectra, collisional activation spectra, kinetic energy releases and critical energies for the formation of these ions and their subsequent decomposition. Normalized rates of fragmentation of metastable molecular ions and metastable [M? OH]⁺ ions have been compared for ion lifetimes up to 30 μs. The energy measurements fail to distinguish between the structures of the [M? OH]⁺ ions, but the normalized fragmentation rates and the collisional activation spectra show their structures to be different.     

A structural investigation of [C6H6]2+ and [C6H6]+˙ ions involved in charge exchange reactions

Mass-analysed ion kinetic energy spectra for collisional activation (CA) of [C₆H₆]⁺˙ formed via electron capture by [C₆H₆]²⁺ ions in collision with neutral benzene molecules have been compared for the C₆H₆ isomers benzene, 1,5-hexadiyne and 2,4-hexadiyne. Comparisons of fragment abundance and total CA fragment yields were also made for [C₆H₆]⁺˙ ions generated by electron ionization (EI). CA conditions of ion velocity and collision gas pressure were identical in these comparisons. In general the fragment abundance patterns for the ions formed by charge exchange were very similar to those for singly charged benzene ions generated by EI. However, significant variations in CA fragment yield (the ratio of the total CA fragment ion abundance to the abundance of the incident unfragmented ions) were observed. It is not clear from the results whether these variations reflect structurally different ions or ions of different internal energies. The CA spectra of [C₆H₆]⁺˙ ions derived from charge exchange reactions between the benzene dication and the target gases He, Ne, Ar, Kr and Xe have also been recorded and, once again, very similar fragment abundance patterns were observed along with large variations in total CA fragment yields. Charge exchange efficiency measurements are reported for reactions between the benzene dication and the targets He, Ne, Ar, Kr, Xe and C₆H₆ (benzene) and also for the doubly charged ions derived from the linear C₆H₆ isomers. In the latter case Xe and benzene targets were used. The energetics and efficiency measurements for the former reactions suggest that for targets such as He and Ne the processes probably involve excited states of the doubly charged ions. The efficiencies measured for the latter reactions were distinctly different for the three C₆H₆ isomers and may indicate a strong dependence of charge exchange cross-section on doubly charged ion structure.     

Gas-phase ion-molecule bimolecular and clustering reactions in dilute solutions of acetonitrile in xenon,krypton, argon,neon and helium

Gas-phase bimolecular and clustering reactions of acetonitrile in Xe, Kr, Ar, Ne and He were studied at high chemical ionization pressures in the new coaxial ion source at Auburn. With electron energies near the ionization threshold, the mass spectra are exceedingly simple and are comprised of [CH₄CH]⁺ and clusters of [CH₄CN]⁺ with various ligands such as H₂O and CH₃CN. At higher electron energies many other peaks appear. The intensities of the new peaks depend upon the ionization potential of the charge transfer gas, the ionizing electron energy and the ion source conditions, and are due to reactions of fragment ions. Residence time distributions at electron energies above the ionization threshold (∼ 30 eV) demonstrate that two molecular structures are present in the ion beam at m/z 42, one presumably is protonated acetonitrile ([CH₃CNH]⁺) while the evidence indicates that the second species does not contain acidic hydrogens. With ionizing electron energies near threshold (∼ 10. 5 eV) only one structure is observed. Studies with electron energies near the ionization threshold under high-pressure chemical ionization conditions result in greatly simplified mass spectra and are possible only because of the coaxial geometry of the ion source.     

Time of flight secondary ion mass spectrometric determination of molecular weight distributions of low polydispersity poly(dimethyl siloxane) with polyatomic primary ions

This work reports a comparison of oligomer and fragment ion intensities resulting from primary ion bombardment with several primary ion sources (Bi_n⁺, C₆₀⁺, and Cs⁺) at various energies in secondary ion mass spectrometry (SIMS). Although the use of polyatomic primary ions are of great interest due to increased secondary ion efficiency and yield, we demonstrate that monatomic primary ions result in increased oligomer ion yield for polymers prepared as submonolayer films on silver substrates. The enhancement of oligomer secondary ion yield with monatomic ions is evidence that monatomic primary ions have a shallower sampling depth than polyatomic ions, resulting from a collision cascade that is less energetic at the sample surface. The results are also consistent with a lower degree of fragmentation of the resultant secondary ions, which is observed when evaluating the fragmentation data and the spectral data.     

A fast atom bombardment and field ionization/field desorption study of some isomeric unsaturated dicarboxylic acids

Geometrically isomeric dicarboxylic acids, such as maleic and fumaric acid and their methyl homologues, and the isomeric phthalic acids, have been investigated using fast atom bombardment, field ionization and field desorption mass spectrometry. The most intense peak in the positive ion fast atom bombardment spectra corresponds with the [M + H]⁺ ion. This ion, when derived from the E -acids, tragments either by successive loss of water and carbon monoxide or by elimination of carbon dioxide. In the case of the Z -acids only elimination of water from the [M + H]⁺ ions is observed to occur to a significant extent. The same is true for the [M + H]⁺ ions of the isomeric phthalic acids, that is the [M + H] ions derived from iso- and terephthalic acid exhibit more fragmentation than those of phthalic acid. All these acids undergo much less fragmentation upon field ionization, where not only abundant [M + H]⁺ ions, but also abundant [M]^+· ions, are observed. Upon field desorption only the [M + H]⁺ and [M + Na]⁺ ions are observed under the measuring conditions. Negative ion fast atom bombardment spectra of the acids mentioned have also been recorded. In addition to the most abundant [M? H]^? ions relatively intense peaks are observed, which correspond with the [M]^?˙ ions. The fragmentations observed for these ions appear to be quite different from those reported in an earlier electron impact study and in a recent atmospheric pressure ionization investigation.     

The correlation of the intensities of the M+˙ and [M − H]+ ions in electron impact mass spectra of cyclic acetals and thioacetals containing a phenylalkoxyester group

The correlation between the intensities of the M^+˙ and [M ? H]⁺ ions of 47 cyclic acetals and thioacetals of alkyl formylphenoxyacetates and propionates as well as the fragmentation patterns in the vicinity of the molecular ion are discussed. The characteristic differences between the spectra of 1,3-dioxolanes, 1,3-oxathiolanes, 1,3-dithiolanes and 1,3-dioxanes are presented.     

Fast atom bombardment and secondary ion mass spectra of thiamine hydrochloride

The ratio of the fragment ions at m/z 122 and m/z 123 in the positive ion fast atom bombardment or secondary ion mass spectra of thiamine hydrochloride varies with sample preparation and experimental conditions. For all mass spectra that contained significant abundances of matrix (S) ions [S + H]⁺, the fragment at m/z 123 is the more abundant of the two ions. If [S + H]⁺ ions are not observed in the mass spectrum under the conditions selected, the ion at m/z 122 is more abundant. This correlation suggests that hydrogen transfer to the fragment ion occurs in the gas phase, with the composition of the ion-solvent cluster ions in the selvedge region being the key factor. The ratio of the fragment ions at m/z 123 and m/z 122 is thus an indicator of the extent of protonation in the selvedge, the region immediately above the solvent surface created by primary particle bombardment.