2-吡咯类酰腙的合成、晶体结构及与小牛胸腺DNA的相互作用

以2-吡咯甲酰肼与2,4-二羟基苯甲醛和2-羟基-3-甲氧基苯甲醛经缩合反应合成2,4-二羟基苯甲醛-2-吡咯甲酰腙C₁₂H₁₁N₃O₃(Ⅰ)和2-羟基-3-甲氧基苯甲醛-2-吡咯甲酰腙C₁₃H₁₅N₃O₄(Ⅱ),并利用红外光谱、元素分析、¹H NMR、X射线单晶衍射和热重分析进行表征,结果表明晶体Ⅰ属单斜晶系,空间群为P2₁/c,Z=4,晶胞参数为a=1.2586(4) nm,b=0.8050(3) nm,c=1.1914(4) nm;晶体Ⅱ为正交晶系,空间群为P2₁2₁2₁,Z=4,晶胞参数为a=0.4756(2) nm,b=1.2491(6) nm,c=2.2145(11) nm。 热重结果显示,化合物Ⅰ和Ⅱ最大热分解峰分别出现在267.59和284.79 ℃,表观活化能分别为176.6和122.9 kJ/mol,表明化合物Ⅰ和Ⅱ具有较高的热稳定性。 利用粘度实验和微量热实验研究了化合物Ⅰ和Ⅱ与CT-DNA的相互作用,均显示两种化合物均与CT-DNA发生了插入作用,且相互作用过程放热,焓变值分别为ΔH(Ⅰ)=4.67 kJ/mol和ΔH(Ⅱ)=4.40 kJ/mol。     

邻菲啰啉并1,2,4-三嗪钴(Ⅲ)配合物的合成及其对小牛胸腺DNA的荧光识别

在4个邻菲啰啉并1,2,4-三嗪新型配体分子(ARTP1ARTP4)合成的基础上,通过ARTP1ARTP4与Co³⁺配位,制备了4个钴(Ⅲ)配合物(Co-ARTP1Co-ARTP4)。 通过傅里叶变换红外光谱仪(FT-IR)、核磁共振波谱仪(NMR)和高分辨质谱(HRMS)仪和紫外-可见分光计(UV-Vis)等技术手段表征了ARTP1ARTP4和Co-ARTP1Co-ARTP4的结构和性能。 结果表明,配合物的紫外吸收峰中出现减色效应,最大吸收峰红移。 配合物以插入的方式与小牛胸腺DNA结合,结合常数K_b分别为4.78×10⁵、6.52×10⁵、5.97×10⁵和6.01×10⁵ L/mol,表明配合物可作为潜在的CT-DNA荧光探针,为探索DNA与有机小分子的作用提供了重要的参考。     

Flow-injection Chemiluminescence Determination of Trace Calf Thymus DNA

A flow injection procedure for the determination of calf thymus DMA (CT DNA) over the range 2.1x10-6~2.1x10-1 B.g mL-1 is described, based on measurement of the enhanced chemiluminescence emission of rhodamine B-Ce(IV) system, activated by imidazole-HCl buffer solution. This method is highly sensitive, with the linearity range broadened to five orders of magnitude. It has been applied to determine CT DNA in synthetic sample with satisfactory results.     

Synthesis of Nitrated Analogs of Distamycin and their DNA Cleaving and Protecting Activities under UV Irradiation

Two nitrated analogs of distamycin were synthesized by a novel haloform reaction and the DCC/HOBT coupling reaction in a convenient and effective way with out amino group protection. Our results have demonstrated that these polyamides show DNA cleaving activity under long UV (LUV 365 nm) irradiation. Furthermore, it is an unexpected discovery that these analogs can prevent DNA dam age under short UV (SUV 302 nm).     

含芘荧光化学敏感器化合物同小牛胸腺DNA分子间的相互作用

研究了含芘荧光化学敏感器分子被ctDNA猝灭的荧光光谱.ctDNA分子对该化学敏感器中芘的激发单体,激基缔合物都有猝灭作用.对激发单体的猝灭速度顺序为;化合物(2)>化合物(1)>芘丁酸>化合物(3);对激基缔合物的猝灭速度顺序为;化合物(2)化合物(3).由得到的荧光猝灭数据,可按公式(2)求得荧光化学敏感器分子与ctDNA分子相互作用的稳定常数.发现化合物(2)与ctDNA分子间有着最强的相互作用能力.按ctDNA和含芘荧光化学敏感器的分子结构、构型以及分子内原子-原子的间距等提出了ctDNA分子与该荧光化学敏感器的作用模型,并对上述结果进行了初步解释.     

Absorption,Fluorescence and Resonance Rayleigh Scattering Spectra of Interaction of Papain with Calf Thymus DNA

In weak acidic medium, interaction between papain and calf thymus DNA (ctDNA) resulted in absorption spectral change, fluorescence quenching of papain and remarkable enhancement of resonance Rayleigh scattering (RRS). The interaction types and binding modes were discussed by characteristics of RRS, absorption, fluorescence and circular dichroism spectra combining thermodynamic data. Four interaction types include electrostatic attraction, hydrophobic force, hydrogen bonding and aromatic stacking interaction. Papain interacted with the major groove of ctDNA. Aromatic stacking interaction is the main reason of change of absorption spectrum and fluorescence quenching of papain. Surface enhanced scattering effect, resonance energy transfer effect, increase of molecular volume and conformational change make contribution to RRS enhancement. The enhanced RRS intensity (ΔI) is directly proportional to the concentration of ctDNA or papain. The detection limit (3σ) is 5.2 ng·mL^?1 for ctDNA and 5.6 ng·mL^?1 for papain. This creates conditions for determination of papain and ctDNA.     

磁性纳米氧化铁与小牛胸腺DNA相互作用研究

以微波辅助共沉淀法合成磁性纳米氧化铁(MNPs), 分别采用紫外-可见吸收光谱(UV-vis)、拉曼光谱(Raman)及琼脂糖凝胶电泳(GE)研究其与小牛胸腺DNA (ct DNA)的相互作用. UV-vis显示出明显的增色效应, 这是由DNA分子受MNPs的干扰碱基外露而引起的|Raman研究表明DNA分子碱基、脱氧核糖以及磷酸骨架均受到MNPs一定程度的干扰|而GE证实了MNPs并未使DNA分子发生断裂、双链解开等本质性变化. 该研究对MNPs在生物医学领域的安全应用具有重要意义.     

Systematical Synthesis of Distamycin Analogues and Their Interaction with Herring Sperm DNA

A simple procedure for the systematical synthesis of eight distamycin analogues containing N‐methylpyrrole (Py) and N‐methylimidazole (Im) has been developed by a chloroform reaction and DCC coupling reaction without amino protection and deprotection, and the interaction of the analogues with Herring Sperm DNA was investigated by fluorescence spectroscopy.     

S-异丙甲草胺与小牛胸腺DNA的相互作用

应用紫外光谱、荧光光谱、DNA热变性法以及黏度法研究了S-异丙甲草胺与小牛胸腺DNA(ctDNA)的相互作用. 结果表明, S-异丙甲草胺使ctDNA在200 nm处的吸收峰发生明显改变, 表现出红移和减色效应, 而对260 nm处的吸收峰产生影响较小, 排除了嵌插作用的可能; ctDNA对S-异丙甲草胺内源性荧光表现出很强的猝灭作用, 且随温度的升高, 其猝灭程度有所下降, 表明S-异丙甲草胺是以形成加合物的方式与ctDNA结合的, 并求得了它们在不同温度下的结合常数; 将不同离子强度条件下S-异丙甲草胺与ctDNA作用以及不同S-异丙甲草胺浓度下ctDNA的热变性温度和黏度变化的研究结果与紫外光谱和荧光光谱相结合, 可以判断S-异丙甲草胺是以沟槽作用的方式与ctDNA结合的.     

农药异丙威与小牛胸腺DNA的作用研究

在生理酸度条件下,采用紫外光谱和荧光光谱法研究异丙威与小牛胸腺DNA的作用表明:DNA对异丙威的荧光有明显的猝灭作用,属于静态猝灭方式;K4[Fe(CN)6]猝灭试验发现DNA对异丙威有明显的保护作用,离子强度的改变对异丙威和异丙威-DNA体系的荧光均无明显影响;异丙威的加入使DNA的熔点升高,并且异丙威能够竞争置换EB与DNA的结合位点。上述实验也表明,异丙威以嵌插方式作用于DNA的结合位点,有可能通过形成DNA加合物的形式造成DNA损伤,从而最终导致基因突变。     

红景天苷与DNA的结合作用研究

在pH=7.4的生理酸度条件下,采用荧光光谱和紫外-可见光谱法,并结合I-效应、离子强度的影响、DNA熔点及粘度测定等实验手段,研究了红景天苷与小牛胸腺DNA的相互作用.结果表明,DNA对红景天苷的内源荧光有明显的猝灭作用,猝灭过程为静态猝灭.由荧光猝灭实验数据,计算出不同温度下红景天苷与DNA之间作用的结合常数和热力...     

The Synthesis of Distamycin Analog Containing Phosphonyl Group

In order to obtain high biological activity compound, a series of distamycin analog containing phosphonyl group were synthesized by chloroform reaction and coupling reaction using DCC/HOBT as promoting additives.     

Synthesis,spectroscopic, thermal properties,Calf thymus DNA binding and quantum chemical studies of M(II) complexes

A new series of transition metal complexes of Cu(II), Co(II), Ni(II), Mn(II) and Cd(II) were prepared from the ligand of 5‐(4‐benzenesulfonic acid azo)‐2‐thioxo‐4‐thiazolidinone (H₂L). The M(II) complexes were structurally elucidated by elemental analysis, infrared spectra, spectral studies, thermal analysis, magnetic measurements and X‐ray diffraction analysis. Elemental analysis and IR result suggested the ligand was bonded to the metal ions in monobasic/neutral bidentate through the nitrogen atom of the hydrazone group and oxygen atom of carbonyl group. The bond length, bond angle, HOMO, LUMO and quantum chemical parameters were calculated to confirm the geometry of the ligand and the M(II) complexes. In vitro antimicrobial behavior of ligand (H₂L) and its M(II) complexes (1‐5) was screened with targeted bacterial and fungal strains. Spectroscopic (UV‐vis) technique was employed in order to study the binding mode and binding strength of the ligand (H₂L) and its M(II) complexes to Calf thymus DNA (CT‐DNA). Intercalation is the most possible mode of interaction of the ligand (H₂L) and its M(II) complexes with CT‐DNA and the determined binding constants. Molecular docking was used to predict the binding between the starts (4‐aminobenzenesulfonic acid (start 1) and 2‐thioxo‐4‐thiazolidinone (start 2)) and tautomers (A‐C) of ligand (H₂L) with the receptors of prostate cancer mutant (PDB code: 2Q7K) and breast cancer mutant (PDB code: 3HB5).     

塑化剂邻苯二甲酸二丁酯与小牛胸腺DNA的沟槽结合

运用多种光谱学方法,结合化学计量学多元曲线分辨-交替最小二乘法(MCRALS),以及分子模拟技术,在人体生理酸度(pH=7.4)条件下研究了邻苯二甲酸二丁酯(DBP)与小牛胸腺DNA(ctDNA)的相互作用。采用MCR-ALS法分析了DBP与ctDNA作用的紫外光谱数据矩阵,结果表明DBP与ctDNA作用形成了DBP-ctDNA复合物。荧光猝灭实验显示,ctDNA对DBP的荧光猝灭属于形成复合物的单一静态猝灭,其主要驱动力为疏水作用和氢键。通过单双链、熔点和粘度等实验证明DBP与ctDNA发生了沟槽结合,结合区域为A、T碱基富集区。圆二色谱和琼脂糖凝胶电泳分析表明,DBP与ctDNA结合导致ctDNA结构变得更为松散,但未造成质粒DNA损伤。分子模拟形象直观地展现了两者的结合姿态,预测结果与实验结果吻合。     

环斑铂立体异构体与DNA的作用

研究了环斑铂的三种立体异构体（RSRR和SS）与小牛胸腺DNA的作用．用等温滴定量热法（ITC）测得三种化合物与DNA在298．15K时相互作用的摩尔烙变分别为-1．1,－7．2和16KJ·mol－1;差示扫描量热法（DSC）结果证实三种化合物与DNA作用使得其解链温度分别升高3．56,7.66和8．53K;而圆二色性波谱研究（CD）则显示出在室温时三种化合物与DNA间的作用使得其摩尔椭圆度发生了不等的微弱变化;核磁共振波谱法（NMR）结果告诉我们在室温时DNA的加入未使SS-环斑铂1H谱的化学位移及峰型出现明显的改变．综合热力学及波谱实验结果,对环斑钥立体异构体与DNA作用及结合的方式进行了讨论．     

钌卟啉[Ru(bpy)2(MPyTPP)Cl]+与DNA作用的研究

钌卟啉(ruthenated porphyrin)是通过卟啉环上的配位基团与多吡啶钌配位而得到的一类具有丰富的光谱和化学活性的大分子配合物[1～5]. 目前, 对钌卟啉的研究大都集中在其氧化还原、电化学以及催化氧化反应活性和超分子自组装等方面, 而对钌卟啉生物功能方面的研究则鲜为报道[6].     

Luminescence Studies on Interaction of an Isoquinoline Alkaloid with Calf Thymus DNA in Aqueous Medium and on Solid Substrate

The interaction of calf thymus DNA(ctDNA) with berberine(Ber) was systematically investigated via UV-Vis, fluorescence and phosphorescence spectroscopies in aqueous solution and on solid substrate. The very weak fluorescence intensity of Ber at 525 nm in aqueous solution can be greatly enhanced by ctDNA. The UV-Vis spectrum shows that Ber could bind with DNA by intercalation. In addition, strong fluorescence of Ber alone could be observed on filter paper substrate and can be quenched by ctDNA effectively, and the increase of fluorescence polarization of Ber on the filter paper implies the intercalation binding. Ber emits phosphorescence at 619 nm in the presence of thallium(I) acetate. The lifetime of Ber increased from 38.4 ms to 43.4 ms with the increase of ctDNA. The increase of lifetime is possibly attributed to the increase of rigidity of Ber after its intercalating into the ctDNA base pairs. This explanation is also augmented by the anionic quenching results. Ber behaves as a typical intercalating agent into ctDNA.The intrinsic binding constant between Ber and ctDNA is (1.84?0.12)?10⁴ L/mol and n=0.16.     

Synthesis, Characterization, Spectroscopic Properties of 2-（4-Dimethylaminophenyl）-5-fluoro-6-（morpholin-4-yl）-1H-benzimidazole and its Interaction with Calf Thymus DNA

Benzimidazole compounds have attracted a renewed interest recently owing to theirpotential applications in high-performance composite materials, electronic chemicals,photosensitive materials, and their special potentials in biological and/or medicinalapplication1,2. Typically, aromatic compounds with near planar structures and contain-ing hydrogen-donor groups or groups, which are capable of being protonated, havespecial interactions with DNA via intercalation, hydrogen-bonding, and so on3.Me…     

Synthesis of Analogs of Phosphoamino Acids and their Biomimic Reactions

Previ0uslyitwasf0undthatphosph0amin0acidscouldstimulatemanyinterestingbioorganicreacti0nsI-3.In0rderfurthert0confirmthesignificanceofph0sphorusinbiochemistry,tw0m0delcomp0unds,anal0gue0fphosphorylaminoacidsc0ntainingP-Cbondandphosphorylglucoaminoacids,weresynthesized.Theirreacti0nswithalcoholandamin0acidwerealsoinvestigatedbyNMRandMSmeth0ds.Theresultsindicatedthatthereactioncharacteristicsofphosphorylbio1ogicalsmallmoleculesweredependentonthe'configuration,functiongroupsandpositions.(O,O-b…     

生物亲和性壳聚糖-二氧化硅复合纳米粒子的合成及其吸附DNA特性研究

采用反相微乳液法制备了壳聚糖-二氧化硅复合纳米粒子,通过透射电镜（TEM）、红外光谱方法、Zeta电位实验等对所合成的复合纳米粒子的结构和性质等进行了表征.结果显示,基于壳聚糖与silica之间超分子作用所形成的复合纳米粒子呈规则的球形,粒径为50 nm左右,具有良好的单分散性和微孔结构,Zeta电位测定结果表明复合纳...