Molecular dynamic study of electric potentials in water clusters containing the sodium or chlorine atom

Molecular dynamics with design is used to calculate the electric potentials of isolated water clusters containing Na⁺ or Cl⁻. The number of water molecules in the clusters is from 4 to 14. It is noted that electrostatic interaction plays a dominant role in the clusters; the dependence of the dielectric constant of the cluster on the size of the latter is determined. Institute of Thermal Physics, Ural Branch, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 39, No. 1, pp. 66–73, January–February, 1998.     

Can semi-empirical models describe HCl dissociation in water?

We discuss the failure of commonly used AM1 and PM3 semiempirical methods to correctly describe acid dissociation. We focus our analysis on HCl because of its physicochemical importance and its relevance in atmospheric chemistry. The structure of non-dissociated and dissociated HCl – (H₂O) _n clusters is accounted for. The very bad results obtained with PM3 (and also with AM1) are related to large errors in gas-phase proton affinity of water and gas-phase acidity of HCl. Indeed, estimation of pKa values shows that neither AM1 nor PM3 are able to predict HCl dissociation in liquid water since HCl is found to be a weaker acid than H₃O⁺. We have proposed in previous works a modified PM3 approach (PM3-MAIS) adapted to intermolecular calculations. It is derived from PM3 by reparameterization of the core–core functions using ab initio data. Since parameters for H–Cl and O–Cl core–core interactions were not yet available, we have carried out the corresponding optimization. Application of the PM3-MAIS method to HCl dissociation in HCl–(H₂O) _n clusters leads to a huge improvement over PM3 results. Though the method predicts a slightly overestimated HCl acidity in water environment, the overall agreement with ab initio calculations is very satisfying and justifies efforts to develop new semiempirical methods.     

Tunnel-exchange states of square-planar bielectron transfer clusters

The tunnel states of square-planar bielectron transfer dⁿ-dⁿ-dⁿ⁺¹-dⁿ⁺¹ (n=0–4) clusters are considered. The nature of the ground spin state is revealed in the limiting case of a strong double exchange. It is shown that the magnetic properties of these systems radically differ from those of clusters with one migrating electron (hole) and tetrameric tetrahedral bielectron transfer clusters. Moldova State University. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 5, pp. 826–833, September–October, 1996. Translated by I. Izvekova     

Cage Structure Formation of Singly Doped Aluminum Cluster Cations Al<Subscript><Emphasis Type="BoldItalic">n</Emphasis></Subscript><Emphasis Type="BoldItalic">TM</Emphasis><Superscript>+</Superscript> (<Emphasis Type="BoldItalic">TM</Emphasis> = Ti,V, Cr)

Structural information on free transition metal doped aluminum clusters, Al _n TM ⁺ (TM = Ti, V, Cr), was obtained by studying their ability for argon physisorption. Systematic size (n = 5 – 35) and temperature (T = 145 – 300 K) dependent investigations reveal that bare Al _n ⁺ clusters are inert toward argon, while Al _n TM ⁺ clusters attach one argon atom up to a critical cluster size. This size is interpreted as the geometrical transition from surface-located dopant atoms to endohedrally doped aluminum clusters with the transition metal atom residing in an aluminum cage. The critical size, n _crit , is found to be surprisingly large, namely n _crit = 16 and n _crit = 19 – 21 for TM = V, Cr, and TM = Ti, respectively. Experimental cluster–argon bond dissociation energies have been derived as function of cluster size from equilibrium mass spectra and are in the 0.1–0.3 eV range.     

Cobalt(II) chloro complexation in N-methylformamide–N, N-dimethylformamide mixtures

Cobalt(II) chloro complexation has been studied by titration calorimetry and spectrophotometry in solvent mixtures of N-methylformamide (NMF) and N,N-dimethylformamide (DMF). It revealed that a series of mononuclear CoCln_n ^(2–n)+ (n=1–4) complexes are formed in the mixtures of NMF mole fraction x _NMF=0.05 and 0.25, and the CoCl⁺, CoCl₃ ^– and CoCl₄ ^2– complexes in the mixture of x _NMF=0.5, and their formation constants, enthalpies and entropies were obtained. As compared with DMF, the complexation is markedly suppressed in the mixtures, as well as in NMF. The decreasing formation constant of CoCl⁺ with the NMF content is mainly ascribed to the decreasing formation entropy. DMF is aprotic and thus less-structured, whereas NMF is protic to form hydrogen- bonded clusters. In DMF-NMF mixtures, solvent clusters in neat NMF are ruptured to yield new clusters involving DMF, the structure of which depends on the solvent composition. The entropy of formation of CoCl⁺ will be discussed in relation to the liquid structure of DMF, NMF and their mixtures.     

Computer simulation of the structure of the hydration shells of calcium and calcium-water-zeolite a

A potential function is suggested to describe the interaction of the calcium ion with the water molecule using the tetrahedral model of the water molecule. Monte Carlo simulations of small clusters Ca(H₂O)_n (n≤20) and analyses of the resulting F-structures showed that the coordination number of Ca is 8. The structure of water adsorbed in the α-cavity of zeolite CaA depends predominantly on interactions with Ca²⁺ ions. The water molecule forms one hydrogen bond with an oxygen atom of the framework; the molecules are not hydrogen-bonded with each other. In this respect the structure of water in the Ca form of zeolite A resembles that in the Na form but differs from that in the K form. Institute of Physical Chemistry, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 1, pp. 88–97, January–February, 1996 Translated by L. Smolina     

Molecular dynamic study of stabilization of the Cl−−Cl− anion pair in steam

This paper studies the formation of a stable anion pair as a result of cluster interactions with water molecules (the number of molecules n=4, 6, 8, and 14). The hydration shells of the clusters obtained in a preliminary calculation are destructed to form closed chains of properly oriented water molecules in the space between the anions. The type of the resulting structure depends on the number of shared water molecules. The character of stabilization of the anion pair, determined by calculating different energy terms, also changes as n increases. The cyclic structures obtained in the region of the anion pair differ considerably from the structure of isolated Cl⁻ (H₂O)_n clusters and that of the aqueous solution of NaCl. The capture of water molecules by the anion pair is manifested in the nucleation of industrial steam. Institute of Thermal Physics, Ural Branch, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 2, pp. 289–298, March–April, 1996. Translated by L. Smolina     

Fragmentation of sputtered vanadium and niobium cluster ions,kinetic release and dissociation energy

The generation and unimolecular fragmentation of V _n ⁺ and Nb _n ⁺ clusters formed in sputtering vanadium and niobium surfaces by Xe⁺ ions has been studied. The method of measuring the kinetic energy of fragment ions (kinetic energy release distribution) has been used to determine the dissociation energy. Kinetic energy spectra have been measured in the field-free zone (corresponding to a time window of 10⁻⁵–10⁻⁴ sec after emission) of an ion microanalyzer with double focusing in reverse geometry. The results of spectra measurement were treated using the Rice-Ramsperge-Kassel theory of unimolecular reactions and the “evaporative ensemble”, which allowed us to calculate the dissociation energies of homonuclear V _n ¹ (n= 5–11) and Nb _n ¹ (n = 3–8) clusters.     

Application of computer imaging,stripping voltammetry and mass spectrometry to study the effect of lead (Pb-EDTA) on the growth and viability of early somatic embryos of Norway spruce (<Emphasis Type="Italic">Picea abies</Emphasis> /L./ Karst.)

Image analysis (IA) was used to determine the areas and circumferences of clusters of early somatic embryos (ESEs) of the Norway spruce (Picea abies /L./Karst.). Results obtained from IA were compared with the fresh weights of the ESE clusters and their esterase activities. The areas of the ESE clusters correlated well with both the increases in fresh weight (R ²=0.99) of the ESEs and their esterase activities (R ²=0.99). In addition, we studied the viability of the ESEs, which was determined by (a) double staining with fluorescein diacetate and propidium iodide (the resulting fluorescence was quantified by IA) and (b) determining esterase activity using a spectrofluorimetric detector. The results obtained with IA and esterase assay were comparable (the deviation between the tangents of the bisectors was 6.4%). IA was also used to study the effect of Pb–EDTA chelate (50, 250 and 500 μM) on the viability of the ESEs and on the growth of clusters. The presence of Pb–EDTA markedly slowed the growth of ESEs clusters (by more than 65% with 250 μM of Pb–EDTA after 288 h of cultivation) and decreased the viability of ESEs (by more than 30% with 500 μM of Pb–EDTA after 288 h of cultivation). The lead concentration in the ESEs was determined by differential pulse anodic stripping voltammetry and increased with the external lead concentration and the time of treatment from 100 to 600 pg Pb/100 mg of fresh weight of ESEs. Glutathione is a diagnostic marker of the influence of Pb–EDTA on ESEs and its content was determined by high–performance liquid chromatography coupled with mass spectrometry. The glutathione content changed linearly with treatment time and the applied external lead concentration. The highest glutathione content was obtained at 250 μM of Pb–EDTA after 192 h of cultivation.     

Theoretical studies on anionic clusters of sulfate anions and carbon dioxide, SO 4?1/?2 (CO2)n, n?=?1?4

Geometry optimizations were performed on monoanionic and dianionic clusters of sulfate anions with carbon dioxide, SO₄^−1/−2(CO₂) _n , for n = 1–4, using the B3PW91 density functional method with the 6-311 + G(3df) basis set. Limited calculations were carried out with the CCSD(T) and MP2 methods. Binding energies, as well as adiabatic and vertical electron detachment energies, were calculated. No covalent bonding is seen for monoanionic clusters, with O₃SO–CO₂ bond distances between 2.8 and 3.0 ?. Dianionic clusters show covalent bonding of type [O₃S–O–CO₂]⁻², [O₃S–O–C(O)O–CO₂]⁻², and [O₂C–O–S(O₂)–O–CO₂]⁻², where one or two oxygens of SO₄⁻² are shared with CO₂. Starting with n = 2, the dianionic clusters become adiabatically more stable than the corresponding monoanionic ones. Comparison with SO₄^−1/−2(SO₂) _n and CO₃^−1/−2(SO₂) _n clusters, the binding energies are smaller for the present SO₄^−1/−2(CO₂) _n systems, while stabilization of the dianion occurs at n = 2 for both SO₄⁻²(CO₂) _n and SO₄⁻²(SO₂) _n , but only at n = 3 for CO₃⁻²(SO₂) _n .     

Mechanism Insights into Second-Order Nonlinear Optical Responses of Anionic Metal Clusters

We present the first-principle calculations on the electronic excitations and second-order properties in solution phase of two typical inorganic trinuclear anionic clusters, [MoCu₂S₄(SPh)₂]²⁻ and [Mo₂CuS₄]¹⁻(edt)₂(PPh₃) (edt=1,2-ethanedithiolato) in the framework of density functional theory (DFT). The computed excitation energies are in good agreement with the outcome of the measurements. The predicted values of the molecular quadratic hyperpolarizabilities are of the comparable order of those of the typical organometallic chromophores. We demonstrate the significant contributions to the second-order responses from the charge transfers between the metal centers (MMCT) which are ascribed to the direct metal–metal bonding interactions in these two charged clusters. This meaningful ligand-independent mechanism for the second-order response largely relates to metal–metal bonding strength, and the understanding will benefit to the future design of the new-generation molecular based nonlinear optical materials and optoelectronic devices by means of the conscious tuning of metal–metal interactions and metal-core structures of inorganic polynuclear clusters.     

Magnetic properties of tetrameric tetrahedral clusters with two-electron transfer

Tunnel-exchange states of tetrahedral tetrameric clusters dⁿ-dⁿ-dⁿ⁺¹-dⁿ⁺¹ with double transfer are considered to calculate the energy levels and wave functions. A method based on the second quantization technique and group-theoretical approach is developed. The nature of the ground spin state of the above systems is determined. It is shown that the structures have magnetic properties that radically differ from the properties of clusters with one migrating electron (hole). Moldova State University. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 3, pp. 458–470, May–June, 1996.     

Gas-phase cluster cations generated by direct laser ablation on AgBr/S mixture

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Magnetic properties and tunnel exchange states of dimeric mixed-valence clusters with two-electron transfer

Tunnel states of dimeric mixed-valence clusters with dⁿ-dⁿ⁺² type two-electron transfer are considered. General expressions for the matrix elements of the double exchange operator are obtained taking into account the contributions of the excited states. The energy spectrum of the clusters is calculated and the magnetic properties are studied. Allowance for the dⁿ⁺¹-dⁿ⁺¹ excited states considerably affects the energy spectrum and the magnetic properties of the systems. Translated fromZhurnal Strukturnoi Khimii, Vol. 38, No. 6, pp. 1038–1045, November–December, 1997.     

Analysis of fragmentation data and molecular orbital calculations of small argon ion clusters

Distributions of argon clusters (Ar _n ⁺ wheren=1–27) obtained in a molecular beam/time-of-flight system were analyzed in order to assess the influence of fragmentation. The results from rudimentary pseudopotential molecular calculations were calculated to predict the most stable structures and stabilities for the smaller argon ion sized clusters (Ar _n ⁺ wheren=3−9).     

Calculated properties of neutral and charged Al<Subscript><Emphasis Type="Italic">n</Emphasis></Subscript>Co<Subscript><Emphasis Type="Italic">m</Emphasis></Subscript> clusters by density functional theory

Density functional calculations are performed to study the structures and electronic properties of Al _n Co _m clusters with n = 1–7 and m = 1–2. Frequency analysis is also performed after structural optimization to make sure that the calculated ground states are real minima. The corresponding total and binding energies, adiabatic electron affinities and ionization potentials are presented and discussed to aid the identification of our calculations. The BSSE correction is also considered in our calculation. Among Al _n Co _m , Al _n Co _m ⁻, and Al _n Co _m ⁼ clusters (n = 1–7 and m = 1–2), Al₄Co⁻, Al₆Co⁻, Al₂Co₂, and Al₆Co₂ are predicted to be more stable. Our results are consistent with the available experimental data.     

Density functional theory study on (F2AlN3) n (n = 1–4) clusters

Possible geometrical structures and relative stabilities of (F₂AlN₃) _n (n = 1–4) clusters were studied using density functional theory at the B3LYP/6-311+G* level. The optimized clusters (F₂AlN₃) _n (n = 2–4) possess cyclic structure containing Al–N_α–Al linkages, and azido in azides has linear structure. The IR spectra of the optimized (F₂AlN₃) _n (n = 1–4) clusters have three vibrational sections, the whole strongest vibrational peaks lie in 2218–2246 cm⁻¹, and the vibrational modes are N₃ asymmetric stretching vibrations. Trends in thermodynamic properties with temperature and oligomerization degree n are discussed, respectively. A study of their thermodynamic properties suggests that monomer 1A forms the most stable clusters (2A, 3A, and 4B) can occur spontaneously in the gas phase at temperatures up to 800 K.     

Determination of partial immersion enthalpy in the interaction of water and activated carbon

A way to calculate the enthalpic contributions of each component of the mixture of activated carbon and water to the immersion enthalpy using the concepts of the solution enthalpies is presented. By determining the immersion enthalpies of a microporous activated carbon in water, with values that are between –18.97 and −27.21 Jg⁻¹, from these and the mass ratio of activated carbon and water, differential enthalpies for the activated carbon, ΔH_DIFacH_{{\rm DIF}_{\rm ac}} and water, ΔH_DIFwH_{{\rm DIF}_{\rm w}} are calculated, and values between –15.95 and –26.81 Jg⁻¹ and between –19.14 and –42.45 Jg⁻¹, respectively are obtained. For low ratios of the mixture, the components’ contributions to the immersion enthalpy of activated carbon and water differ by 3.20 Jg⁻¹.     

Studies on complexation of cobalt with bioligand

The present work discusses the complexation behavior of bioligand cysteine with cobalt and the immobilization of this complex (Co–Cys) onto a biocompatible ligand and common drug base, polyvinylpyrrolidone (PVP). The complexation behavior has been studied by radiometric method and UV–Vis spectrophotometry. The radiometric method involves dialysis of ⁶⁰Co–Cys–PVP complex against triple distilled water which subsequently gives the dynamic dissociation constant (k _d) of the complex. The half life of ⁶⁰Co–Cys–PVP complex calculated from k _d value is 22.6 h against triple distilled water at pH 8.5. The UV–Vis spectra analysis confirms the complexation of Co with cysteine at this pH and also indicates that the cysteine ligated Co(II) centers easily get oxidised to Co(III) centers (low spin, d⁶) in the presence of air at alkaline pH showing no d–d transitions.     

The photodynamics of the [Ru(bpy)<Subscript>3</Subscript>]<Superscript>2+</Superscript> ion dopant in a solvent exposed silica sol–gel thin film

The [Ru(bpy)₃]²⁺ ion was encapsulated in a silica based sol–gel thin film, and the luminescence decay time constant of the photo-excited ³MLCT (metal-ligand-charge-transfer) was examined when this thin film was immersed in water, methanol, ethanol, 2-propanol, and glycerol. The luminescence decays of the films in the methanol, 2-propanol, and glycerol were better explained by a KWW model, while the luminescence decay of film immersed in water and ethanol were both well explained by a single exponential decay. Intriguingly, the dynamics of the dopants immersed in water, ethanol as well as in sol–gel bulk deviated from a single exponential fit and began to better explained by the the KWW model as temperature increased. The energy gap, ΔE(sol–gel film) and ΔE(solution), between the lowest ³MLCT state and atom localized ³ dd state for dopants under the presence of all solvents tested in this study were extracted from the temperature dependence study of the luminescence decay time constant. Generally, the ΔE(sol–gel film) values of ethanol and water were reduced from ΔE(solution), and ΔE(sol–gel film) value in all solvents matched the value of ΔE for sol–gel bulk. The effect on the dynamics in solvent over three weeks was investigated, and the films immersed in water presented the most remarkable monotonic increase in relaxation rates finally approaching the asymptotic value observed in the water solution. This phenomenon was considered to correspond to a trapping environment change due to a hydrophilic interaction through sequential intrusion of water or ethanol solvent into sol–gel pores.