Metal complexes of C2-symmetric chiral bipyridine ligands. X-ray structure of [bis(nitrato)(4S,5S)-2,2-dimethyl-4,5-bis(2-pyridyl)-1,3-dioxolane cobalt(II)]

Chelating properties of C₂-symmetric chiral bipyridine ligands are discussed. In particular we report the syntheses of the cobalt(II), nickel(II), zinc(II) and copper(II) complexes of (4S,5S)-2,2-dimethyl-4,5-bis(2-pyridyl)-1,3-dioxolane. All compounds have been characterized by IR spectroscopy, and an X-ray diffraction analysis has been carried out on one of them: Co(L)(NO₃)₂. The ligand coordinates the cobalt atom by the two nitrogen donors N(1) and N(2). A seven-membered chelation ring is formed, presenting a remarkable non-crystallographic twofold pseudosymmetry around the axis connecting Co and the midpoint of the C(6)–C(7) bond. The metal also binds two monodentate nitrates, thus completing a distorted coordination tetrahedron.     

A novel six-vertex coordination polyhedron in the crystal structure of the CuBr2 complex of 1,6-bis(benzimidazol-2-yl)-2,5-dioxahexane

A novel polyhedron has been discovered in the coordination geometry of the CuBr₂ complex of 1,6-bis(benzimidazol-2-yl)-2,5-dioxahexane. A rhombus or lozenge- shaped base (BrNBrN) shares its edges with four BrNO triangles and its Br vertices with two BrOO triangles, all six triangles lying on one side of the base. The polyhedron may be derived from an octahedron (with a trans-Br₂, cis-O₂, cis-N₂ arrangement of vertices) by breaking the N ... N edge and bringing the N atoms into coplanarity with the Br atoms.     

New copper(II) coordination compounds with 1,3-bis(5-(pyridin-2-yl)-1,2,4-triazol-3-yl)propane

Two new copper(II) complexes with 1,3-bis(5-(pyridin-2-yl)-1,2,4-triazol-3-yl)propane (H₂L), [Cu₂(HL)Cl₃] · H₂O (I) and [Cu(H₂L)](ClO₄)₂ (II), were described. The compounds were characterized by elemental analysis, IR spectroscopy, and magnetochemical data. According to X-ray diffraction data (CIF files CCDC nos. 1497511 (I), 1497512 (II)), complex I is binuclear and the metal cations are bound by the nitrogen atoms of the triazole ring and by the chloride anion. Complex II is mononuclear. Analysis of the temperature dependence of the magnetic susceptibility of I attests to the antiferromagnetic coupling of paramagnetic centers (–2J = 18 cm^–1). Exchange channels are analyzed by means of density functional theory (B3LYP/6-311G(d)) using the broken symmetry approach.     

X-ray structure of physiological copper(II)-bis(L-histidinato) complex

The isolation and the X-ray crystal structure of physiological copper(II)-L-histidine complex are reported. The neutral five-coordinate complex shows distorted square pyramidal geometry with bidentate and tridentate L-histidine ligands. The basic character of the pendent imidazole group and H-bonding interactions of bidentate L-histidine ligand are important for copper transport. The unique structural features help explain the origin of its thermodynamic stability and kinetic reactivity in human blood along with the ternary copper(II)-amino acid complexes. The role of L-histidine in interaction with copper(II)-albumin, in cellular uptake of copper, and in treatment of Menkes disease can be studied using these results.     

Syntheses and Crystal Structures of the First Row Transition Metals with 1,6-Bis(2'-pyridyl)-2,5-dithiahexane

Six first row transition metal complexes with 1,6-bis(2′-pyridyl)-2,5-dithiahexane(Py_2S_2), namely, MnPy_2S_2Cl_2(1), FePy_2S_2Cl_2(2), Co Py_2S_2Cl(3), CoPy_2S_2(SCN)_2(4), NiPy_2S_2(SCN)_2(5) and NiPy_2S_2(N_3)_2(6), have been synthesized. A mixture of MCl_2·x H_2O(M = Mn, Co) in MeOH(FeCl_2·4H_2O in MeCN) and the stoichiometric amount of Py_2S_2 was stirred for 4 h at room temperature, then these aiming products 1, 2 and 3 could be obtained by purification. A mixture of MPy_2S_2Cl_2(M = Co, Ni) in MeOH and two equivalents of KSCN or NaN_3 was stirred for 4 h at room temperature. After that, complexes 4, 5 and 6 could be got by purifying. For 1, 2, 3, 4 and 5, the metal centers are hexa-coordinated in a similar distorted octahedral geometry and the crystal structures have the same space group Pbcn. The crystal structure of compound 6 belongs to monoclinic with space group P21/c. The coordinated atoms around M(Ⅱ) are two pyridyl N atoms(N(1) and N(2)), two thioether S atoms(S(1) and S(2)) and two chloride ions(Cl(1) and Cl(2)) in compounds 1, 2, and 3, but in 4, 5, and 6, two chloride ions(Cl(1) and Cl(2)) are replaced by another two N atoms from N_3~– or NCS~–.     

Synthesis and crystal structure of bis(m-hydroxybenzoato(1-))bis(benzimidazole) copper(II) dihydrate

The crystal structure of the title complex was determined by single-crystal X-ray diffraction methods. The unit cell contains two independent molecules, A and B. B is a mononuclear Cu(II) complex with square-planar coordination geometry formed by two benzimidazole molecules and two hydroxylbenzoate anions. A is a dimer of B, formed by bridging hydroxybenzoate, and copper assumes square-pyramidal geometry. Aromatic π–π stacking is observed between parallel benzimidazole rings of neighboring A molecules. IR spectra of the compound are assigned in line with the crystal structure.     

Investigation into the crystal structure of bis(pyridine)-bis(trichloroacetato) copper(II) and its electrophotochemical properties

A novel chained Cu(II) complex was synthesized from trichloroacetato copper(II) and pyridine in ethanol solvent, and characterized by elemental analysis and infrared (IR) spectroscopy. The special crystal structure of the Cu(II) complex was determined by X-ray single-crystal diffraction. The results indicate that a chained structure of the Cu(II) complex formed through intermolecular hydrogen bonds. Cu(CCl₃COO)₂(C₅H₅N)₂(H₂O) was monoclinic, with unit cell P21/c and cell parameters as follows: a = 14.389(3) Å, b = 7.1911(14) Å, c = 23.107(8) Å, V = 2,257.5(10) Å³, Z = 4, M _r = 564.51, D _c = 1.661 mg/m³, T = 293(2) K, F(000) = 1,124, μ(Mo K_α) = 1.704 mm^?1, R = 0.0984, and ωR = 0.2791. The electrochemical behavior of the Cu(II) complex on a glassy carbon working electrode determined by cyclic voltammetry showed the electrochemical activity of the title compound at 0.2 to ?0.3 V (versus SCE) in NH₃–NH₄Cl buffer solution (pH 9.2), and the redox peak current of the complex had a good linear relationship with the square root of the scan rate in the range 0.02–0.2 V/s.     

Four Zn(II)/Cd(II) coordination polymers derived from isomeric benzenedicarboxylates and 1,6-bis(triazol)hexane ligand: synthesis,crystal structure,and luminescent properties

Four coordination polymers, [Zn(o-bdc)(bth)_0.5(H₂O)] _n (1), [Cd(o-bdc)(bth)_0.5(H₂O)] _n (2), [Zn(m-bdc)(bth)] _n (3), and [Cd(p-bdc)(bth)?·?(H₂O)₂] _n (4) (where o-bdc?=?1,2-benzenedicarboxylate, m-bdc?=?1,3-benzenedicarboxylate, p-bdc?=?1,4-benzenedicarboxylate, and bth?=?1,6-bis(triazol)hexane), have been hydrothermally synthesized and structurally characterized. Both 1 and 2 are isostructural, featuring two binodal architectures: (6³)(6⁵·8) topology in terms of o-bdc and Zn^II/Cd^II as three- and four-connected nodes. Complex 3 shows a 2-D (4,4) network with the Zn?···?Zn?···?Zn angle of 57.84°, whereas 4 exhibits planar 2-D (4,4) network. These 2-D networks of 3 and 4 are extended by supramolecular interactions, such as CH?···?π/π–π stacking and hydrogen-bonding into 3-D architecture. A structural comparison of these complexes demonstrates that the dicarboxylate building blocks with different dispositions of the carboxyl site play a key role in governing the coordination motifs as well as 3-D supramolecular lattices. Solid-state properties such as photoluminescence and thermal stabilities of 1–4 have also been studied.     

X-ray crystal structure and vibrational spectra of hydrazides and their metal complexes. Part II. Hexaaquacobalt(II)bis(phthalhydrazidato)tetrahydrate

The hexaaquacobalt(II)bis(phthalhydrazidato)tetrahydrate, [Co(H₂O)₆](C₈N₂O₂H₅)₂·4H₂O is examined using single crystal X-ray diffraction analysis. The crystals are triclinic, space group , with a = 9.757(1), b = 10.955(2), c = 11.106(1),  = 100.79(2), β = 90.35(3), γ = 91.54(1) and Z = 2. In [Co(H₂O)₆](C₈N₂O₂H₅)₂·4H₂O, the cobalt(II) is coordinated by six water ligands and the [Co(H₂O)₆]²⁺ is associated with the two O-deprotonated phthalhydrazidato ions only by hydrogen bonds. The infrared and Raman spectra of phthalhydrazide (PH) and infrared spectra of deuterated derivative phthalhydrazide (PD) and of [Co(H₂O)₆](C₈N₂O₂H₅)₂·4H₂O are reported. The theoretical wavenumbers, infrared intensities and Raman scattering activities have been calculated using density functional (B3LYP) method with the 6-311++G(d,p) basis set. The calculated potential energy distribution has proved to be of great help in assigning the spectra PH, its deuterated derivative and [Co(H₂O)₆](C₈N₂O₂H₅)₂·4H₂O. The results from natural bond orbital (NBO) analysis for keto-hydroxy form of PH are presented.     

X-ray crystal structure of manganese(II) bis(ethylenediphosphinetetraacetato)nickelate(II) hexadecahydrate

X-ray structure analysis of the title compound (diffractometer data, R = 0.061 for 2805 reflections) confirmed the structure proposed on the basis of spectral evidence for the series of isostructural complexes, M₃[NiL₂ (H₂O)₁₆, where H₄L = (HO₂CCH₂)₂PCH₂CH₂P(CH₂CO₂H)₂ and M = Mn, Fe, Co, Ni, Zn or Cd. The compound studied is monoclinic, P2₁/c, a = 9.990(3), b = 28.51(2), c = 14.828(9) Å, β =94.50(5)°, Z = 4. Nickel(II) is coordinated by two P,P-chelating ligand anions in a rather distorted square planar environment. The carboxyl groups of the ligand are not coordinated to nickel; three of them remain free and five are bonded, together with 10 of the total of 16 water molecules, to the manganese(II) ions. The environments of three manganese ions thus formed are all nearly octahedral but differ in the number and bonding mode of the carboxyls (monodentate and/or bridging bidentate). The carboxyl-to-manganese bonds produce a three-dimensional structure of the compound which is further stabilized by hydrogen bonding.     

On the structure of copper(II) coordination compounds with L-histidine

Quantum chemical calculations are performed for the spatial and electron structure of complex compounds of L-histidine and its ionized forms with copper(II) for a variety of compositions within the density functional theory (DFT) using the B3LYP functional and 6-311G(d) basis. The solvent (water) is considered within the PCM approximation. EPR spectroscopy is used to study the equilibrium in the copper(II)–L-histidine system in an aqueous solution at рН 2–11. A comparison between the theoretical calculations and the EPR spectra suggests the following geometry for the coordination environment of the copper(II) ion in the complex compounds: CuHLL–square-planar coordination; CuL₂, CuHLL′, and CuLL′–distorted square pyramid; and CuL₂′–octahedral environment.     

Synthesis and structure of tetracoordinated nickel(II) complexes of deprotonated chelated aminoazo ligands: X-ray crystal structure of bis[1-isopropyl-3-methyl-4-(4-methylphenylazo)-5-(4-methoxyphenylamidato)pyrazole] nickel(II)

Summary Tetracoordinate nickel(II) complexes NiL₂ derived from the deprotonated forms of aminoazoligands HL were prepared and investigated by spectroscopy and magnetic susceptibility measurements. The magnetic moments, which lie in the 3.1–3.6 B.M. range correspond to the occurrence both in solution and in the solid state of the high spin (S = 1) form and a tetrahedral configuration at the metal centre. The u.v. spectra exhibit three ligand field bands at 1020–1280 nm characteristic of high spin nickel(II) complexes. The large isotropic chemical shifts found in the ¹H n.m.r. spectra are consistent with partial delocalization of unpaired electron spin density to the ligand HOMO. The X-ray single crystal structure of NiL ₂ ⁴ [L⁴= 1-isopropyl-3-methyl-4-(4-methylphenylazo)-5-(4-methoxyphenylamino)-pyrazole] reveals that the metal is coordinated by four nitrogen atoms in tetrahedral configuration with an angle of 90° between the N(1)NiN(2) and N(6)NiN(7) planes belonging to the different almost planar metallocycles. The rates of RS interconversion of the tetrahedral configuration for NiL ₂ ⁴ and NiL ₂ ⁵ [L⁵ = 1-isopropyl-3-methyl-4-phenylazo-d ₅-5-(4-methoxyphenylamino)pyrazole] are slow on the n.m.r. timescale. In contrast to NiL ₂ ¹ -Ni ₂ ⁶ , NiL ₂ ⁷ ], which contains coordinated NH-groups instead of NAr-groups, is planar.     

Preparation and crystal structure of a triple parallel interpenetrated copper coordination polymer based on a flexible bis(imidazole) ligand

A Cu(II) coordination polymer, [Cu(L)(bdc)] _n (L = 1,4-bis(imidazole)butane, bdc = 1,3-benzenedicarboxylate) has been hydrothermally synthesized and characterized by elemental analysis, IR spectrum, thermogravimetric analysis, and single-crystal X-ray diffraction. The complex is a rare example of a threefold parallel interpenetrated coordination bonding network based on undulant [Cu₄(μ ₂-L)₂(μ ₂-bdc)₂] parallelograms with 4⁴-sql layer. The heterogeneous catalytic activity of the complex was tested for the degradation of Congo red azo dye in a Fenton-like process in which the degradation efficiency reached 94 % after 100 min. Kinetic analysis indicates that the degradation rate of the dye can be approximated by pseudo-first-order kinetics.     

Anion effect on the construction of copper(II) coordination polymers with the twisted ligand bis(4-pyridylthio)methane

The reaction of CuSO₄ · H₂O with 4-bpytm [4-bpytm = bis(4-pyridylthio)methane] in EtOH afforded the complex [Cu(SO₄)(4-bpytm)(H₂O)₃] · H₂O (1 · H₂O) while the reaction of 4-bpytm with Cu(NO₃)₂ · 3H₂O in EtOH afforded the complex [Cu(NO₃)₂(4-bpytm)₂] · H₂O (2 · H₂O). The reaction of 4-bpytm with Cu(NO₃)₂ · 3H₂O in EtOH/dmf under microwave irradiation afforded the pseudo-polymorph [Cu(NO₃)₂(4-bpytm)₂] · Solv (2 · Solv). Compound 1 · H₂O forms helical chains while compounds 2 · H₂O and 2 · Solv are 2D coordination polymers with a (4,4) topology based on rhombic grids in 2 · H₂O and on a parquet motif in 2 · Solv. The 3D supramolecular organization through hydrogen bonding is analyzed for the three compounds and their thermal behaviour was also investigated.     

FT-Raman,FT-IR,NMR structural characterization and antimicrobial activities of 1,6-bis(benzimidazol-2-yl)-3,4-dithiahexane ligand and its Hg(II) halide complexes

1,6-Bis(benzimidaz-2-yl)-3,4-dithiahexane ligand (L) and its mercury halide complexes were prepared and characterised. The elemental analysis, molecular conductivity, FT-Raman, FT-IR (mid, far), ¹H, ¹³C NMR and geometry optimization in MOPAC using MNDOd parameter on CACHE, prove the existence of neutral, mononuclear and the distorted tetrahedral [Hg(L)X₂] complexes. In all the three complexes, the ligand acts as a chelating bidentate, through two of the bridging sulphur atoms and together with the monodentate coordination of the two anionic halide ligands to the metal centre forming a possible 4-coordinate compounds. The antimicrobial activities of free ligand, its hydrochlorinated salt, mercury halides and the complexes are evaluated using disk diffusion method in dimethyl sulfoxide (DMSO) as well as the minimal inhibitory concentration (MIC) dilution method, against 10 bacteria. The obtained results from disk diffusion method are assessed in side-by-side comparison with those of Penicillin-g, Ampicillin, Cefotaxime, Vancomycin, Oflaxacin and Tetracyclin well-known antibacterial agents. The results from dilution procedure are compared with Gentamycin as antibacterial and Nystatin as antifungal. The antifungal activities are reported on five yeast cultures namely Candida albicans, Kluyveromyces fragilis, Rhodotorula rubra, Debaryomyces hansenii and Hanseniaspora guilliermondii, and the results are referenced with Nystatin, Ketaconazole and Clotrimazole, commercial antifungal agents. In most cases, the compounds show broad-spectrum (Gram⁺ & Gram⁻ bacteria) activities that are comparatively, slightly less active or equipotent to the antibiotic and antifungal agents in the comparison tests.     

Unusual coordination of a chloride ion to six copper ions: Synthesis and crystal structure of copper(II) complexes with 4-(4-hydroxyphenyl)-1,2,4-triazole

Novel copper(II) complexes, molecular [Cu₆(μ₆-Cl)(μ₃-OH)₂(μ-L)₆Cl₉(H₂O)₃] · 3H₂O (1) and polymeric [Cu(μ-L)(μ-OH)(H₂O)₂]Cl (2) (L = 4-(4-hydroxyphenyl)-1,2,4-triazole), have been prepared and characterized by X-ray structural analysis. Compound 1 appears to be an unusual example of a chloride ion with six equal Cu–Cl distances of 2.8397(3) Å. It has also been characterized by X-ray powder diffraction and magnetic measurements. Both complexes have distorted octahedral configurations of copper ions; the coordination cores are CuN₂Cl₂O₂ or CuN₂Cl₃O (1) and CuN₂O₄ (2).