Spontaneous H2 Loss through the Interaction of Squaric Acid Derivatives and BeH2

The most stable complexes between squaric acid and its sulfur‐ and selenium‐containing analogues (C₄X₄H₂; X=O, S, Se) with BeY₂ (Y=H, F) were studied by means of the Gaussian 04 (G4) composite ab initio theory. Squaric acid derivatives are predicted to be very strong acids in the gas phase; their acidity increases with the size of the chalcogen, with C₄Se₄H₂ being the strongest acid of the series and stronger than sulfuric acid. The relative stability of the C₄X₄H₂ ? BeY₂ (X=O, S, Se; Y=H, F) complexes changes with the nature of the chalcogen atom; but more importantly, the formation of the C₄X₄H₂ ? BeF₂ complexes results in a substantial acidity enhancement of the squaric moiety owing to the dramatic electron‐density redistribution undergone by the system when the beryllium bond is formed. The most significant consequence of this acidity enhancement is that when BeF₂ is replaced by BeH₂, a spontaneous exergonic loss of H₂ is observed regardless of the nature of the chalcogen atom. This is another clear piece of evidence of the important role that closed‐shell interactions play in the modulation of physicochemical properties of the Lewis acid and/or the Lewis base.     

Intermolecular Weak Interactions in HTeXH Dimers (X=O,S, Se,Te): Hydrogen Bonds,Chalcogen–Chalcogen Contacts and Chiral Discrimination

A theoretical study of the HTeXH (X=O, S, Se and Te) monomers and homodimers was carried out by means of second‐order Møller‐Plesset perturbation theory (MP2) computational methods. In the case of monomers, the isomerization energy from HTeXH to H₂Te=X and H₂X=Te (X=O, S, Se, and Te) and the rotational transition‐state barriers were obtained. Due to the chiral nature of these compounds, homo and heterochiral dimers were found. The electron density of the complexes was characterized with the atoms‐in‐molecules (AIM) methodology, finding a large variety of interactions. The charge transfer within the dimers was analyzed by means of natural bond orbitals (NBO). The density functional theory‐symmetry adapted perturbation theory (DFT‐SAPT) method was used to compute the components of the interaction energies. Hydrogen bonds and chalcogen–chalcogen interactions were characterized and their influence analyzed concerning the stability and chiral discrimination of the dimers.     

Theoretical Comparison of the Bonding in CpCr(CO)2(NX) [X = O,S, Se,Te]

Molecular orbital calculations employing the PM3 model have been used to examine the bonding in the complexes CpCr(CO)₂(NX) (X = O, S, Se, Te). The previously established trend of increasing Cr-N interaction as X changes from O to S is demonstrated by these calculations, and found to extend to Se and Te. Bond lengths, bond orders, vibrational frequencies, and heats of reaction are used to support the conclusion that metal to ligand π-backbonding increases down the periodic chart from NO to NTe.     

Comparison between Hydrogen and Halogen Bonds in Complexes of 6-OX-Fulvene with Pnicogen and Chalcogen Electron Donors

Quantum chemical calculations are applied to complexes of 6-OX-fulvene (X=H, Cl, Br, I) with ZH₃/H₂Y (Z=N, P, As, Sb; Y=O, S, Se, Te) to study the competition between the hydrogen bond and the halogen bond. The H-bond weakens as the base atom grows in size and the associated negative electrostatic potential on the Lewis base atom diminishes. The pattern for the halogen bonds is more complicated. In most cases, the halogen bond is stronger for the heavier halogen atom, and pnicogen electron donors are more strongly bound than chalcogen. Halogen bonds to chalcogen atoms strengthen in the order O<S<Se<Te, whereas the pattern is murkier for the pnicogen donors. In terms of competition, most halogen bonds to pnicogen donors are stronger than their H-bond analogues, but there is no clear pattern with respect to chalcogen donors. O prefers a H-bond, while halogen bonds are favored by Te. For S and Se, I-bonds are strongest, followed Br, H, and Cl-bonds in that order.     

An ab initio investigation of chalcogen–hydride interactions involving HXeH as a chalcogen bond acceptor

This work presents an ab initio study on chalcogen–hydride interactions in several binary complexes of chalcogen-containing molecules with HXeH. The geometries, H–Xe stretching frequencies and interaction energies of XCY···HXeH binary complexes are investigated at MP2/aug-cc-pVTZ and CCSD(T)/aug-cc-pVTZ levels of theory, where X = O, S, Se, Te and Y = S, Se, Te. For each XCY···HXeH complex, a chalcogen–hydride bond is formed between the negatively charged hydrogen atom of the HXeH molecule and the most positive electrostatic potential region (σ-hole) on the surface of the interacting atom Y. Upon complex formation, a notable blue shift is found for the H–Xe stretch vibration. This result reveals that there is a stronger H^?(XeH)⁺ ion-pair character in XCY···HXeH complexes than in free HXeH molecule. In order to shed light on the origin of the chalcogen–hydride interactions, molecular electrostatic potential, quantum theory of atoms in molecules and interaction energy decomposition analyses are performed. Cooperative effects between a conventional chalcogen bond and the chalcogen–hydride interaction in OCY···OCY···HXeH complexes are also investigated.     

Doping Sumanene with Both Chalcogens and Phosphorus(V): One‐Step Synthesis,Coordination, and Selective Response Toward AgI

Heterasumanenes 4 – 6 containing chalcogen (S, Se, and Te) and phosphorus atoms have been synthesized in a one‐pot reaction from trichalcogenasumanenes 1 – 3 by replacing one chalcogen atom with a P=S unit. The P=S unit makes 4 – 6 almost planar and shrinks the HOMO–LUMO gap as compared to 1 – 3 . The bonding between Ag⁺ and S atom on P=S brings about a distinct change to the optical properties of 4 – 6 ; 4 in particular shows a selective fluorescence response toward Ag⁺ with LOD of 0.21 μm . Compounds 4 – 6 form complexes with AgNO₃ to be ( 4 )₂?AgNO₃, ( 5 )₂?AgNO₃, and ( 6 )₂?(AgNO₃)₃. In complexes, the coordination between Ag⁺ and P=S is observed, which leads to shrinkage of C?P and C?X (X=S, Se, Te) bond lengths. As a result, 4 , 5 , and 6 are all bowl‐shaped in complexes with bowl‐depths reaching to 0.66 Å, 0.42 Å, and 0.40 Å, respectively. There are Ag?Te dative bonds between Ag⁺ and Te atom on telluorophene in ( 6 )₂?(AgNO₃)₃.     

Doping Sumanene with Both Chalcogens and Phosphorus(V): One‐Step Synthesis,Coordination, and Selective Response Toward AgI

Heterasumanenes 4 – 6 containing chalcogen (S, Se, and Te) and phosphorus atoms have been synthesized in a one‐pot reaction from trichalcogenasumanenes 1 – 3 by replacing one chalcogen atom with a P=S unit. The P=S unit makes 4 – 6 almost planar and shrinks the HOMO–LUMO gap as compared to 1 – 3 . The bonding between Ag⁺ and S atom on P=S brings about a distinct change to the optical properties of 4 – 6 ; 4 in particular shows a selective fluorescence response toward Ag⁺ with LOD of 0.21 μm . Compounds 4 – 6 form complexes with AgNO₃ to be ( 4 )₂?AgNO₃, ( 5 )₂?AgNO₃, and ( 6 )₂?(AgNO₃)₃. In complexes, the coordination between Ag⁺ and P=S is observed, which leads to shrinkage of C?P and C?X (X=S, Se, Te) bond lengths. As a result, 4 , 5 , and 6 are all bowl‐shaped in complexes with bowl‐depths reaching to 0.66 Å, 0.42 Å, and 0.40 Å, respectively. There are Ag?Te dative bonds between Ag⁺ and Te atom on telluorophene in ( 6 )₂?(AgNO₃)₃.     

Chiral Chalcogenyl-Substituted Naphthyl- and Acenaphthyl-Silanes and Their Cations

Cyclic silylated chalconium borates 13 [B(C₆F₅)₄] and 14 [B(C₆F₅)₄] with peri-acenaphthyl and peri-naphthyl skeletons were synthesized from unsymmetrically substituted silanes 3 , 4 , 6 , 7 , 9 and 10 using the standard Corey protocol (Chalcogen Ch=O, S, Se, Te). The configuration at the chalcogen atom is trigonal pyramidal for Ch=S, Se, Te, leading to the formation of cis- and trans-isomers in the case of phenylmethylsilyl cations. With the bulkier tert-butyl group at silicon, the configuration at the chalcogen atoms is predetermined to give almost exclusively the trans-configurated cyclic silylchalconium ions. The barriers for the inversion of the configuration at the sulfur atoms of sulfonium ions 13 c and 14 a are substantial (72–74 kJ mol⁻¹) as shown by variable temperature NMR spectroscopy. The neighboring group effect of the thiophenyl substituent is sufficiently strong to preserve chiral information at the silicon atom at low temperatures.     

A Series of Isolable Silanoic Thio‐, Seleno‐, and Telluroesters (LSi(X)OR) with Donor‐Supported SiX Double Bonds (L=β‐Diketiminate; X=S,Se, Te)

The first silicon analogues of carbonic (carboxylic) esters, the silanoic thio‐, seleno‐, and tellurosilylesters 3 (Si?S), 4 (Si?Se), and 5 (Si?Te), were prepared and isolated in crystalline form in high yield. These thermally robust compounds are easily accessible by direct reaction of the stable siloxysilylene L(Si:)OSi(H)L′ 2 (L=HC(CMe)₂[N(aryl)₂], L′=CH[(C?CH₂)‐CMe][N(aryl)]₂; aryl=2,6‐iPr₂C₆H₃) with the respective elemental chalcogen. The novel compounds were fully characterized by methods including multinuclear NMR spectroscopy and single‐crystal X‐ray diffraction analysis. Owing to intramolecular N→Si donor–acceptor support of the Si?X moieties (X=S, Se, Te), these compounds have a classical valence‐bond N⁺–Si–X^? resonance betaine structure. At the same time, they also display a relatively strong nonclassical Si?X π‐bonding interaction between the chalcogen lone‐pair electrons (n_π donor orbitals) and two antibonding Si? N orbitals (σ*_π acceptor orbitals mainly located at silicon), which was shown by IR and UV/Vis spectroscopy. Accordingly, the Si?X bonds in the chalcogenoesters are 7.4 ( 3 ), 6.7 ( 4 ), and 6.9 % ( 5 ) shorter than the corresponding Si? X single bonds and, thus, only a little longer than those in electronically less disturbed Si?X systems (“heavier” ketones).     

Carbon-13 NMR and CNDO/2 studies of phenoxachalcogenins

The ¹³C chemical shifts of the carbon atoms in dibenzodioxin, phenoxathiin, phenoxaselenin and phenoxatellurin were determined in CDCl₃ solutions and assigned. The total (σ and π) charge densitites on the carbon atoms calculated by the CNDO/2 method without consideration of d-orbitals correlated well with the experimentally determined shifts. Rather good agreement was also found between experimental shifts and shifts calculated from ¹³C data for phenyl methyl chalcogenides on the assumption that a phenoxachalcogenin molecule can be assembled from C₆H₅O and C₆H₅X groups. Only the shifts of the carbon atoms bonded to the heavier chalcogen atoms show an upfield trend in the sequence O, S, Se, Te. All other shifts exhibit a downfield trend. These trends are rationalized in terms of the electronegativities, abilities to participate in π-interactions, and anisotropy effects of the chalcogen atoms.     

Synthese und reaktivität von dienylmetall-verbindungen XXVIII. Über kationen des typs [C5H5Fe(CO)L(EME2)]+ (E = S,Se, Te)

The chiral cations, [CpFe(CO)(EMe₂)L]⁺, are obtained both by reaction of [CpFe(CO)(EMe₂)₂]⁺ with the ligands (L) by heating, and by irradiation of the cations [C₅H₅Fe(CO)₂EMe₂]⁺ in the presence of L (E = S, Se, Te; L = PR₃, AsR₃, SbR₃). The inversion about the chalcogen atom is investigated by DNMR spectrocopy. Compounds of the type [C₅H₅Fe(TeMe₂)L₂]⁺] are formed by irradiation of [C₅H₅Fe(CO)₂(TeMe₂)]⁺ and the ligands (L₂ = 2 PR₃, R = CH₃, OCH₃, OC₆H₅; L₂ = R₂P(CH₂)_nPR₂, R = C₆H₅, n = 1,2,3). ⁷⁷Se and ¹²⁵Te NMR data vary according to the donor properties of the ligand L in the complexes.     

To Coordinate or not to Coordinate: The Special Role of Chalcogen Ether Functionalities in the Design of Twofold Functionalized Cyclopentadienyl Ligands [Cp,O,Ch (Ch = S,Se)]

The solvent‐ and catalyst free synthesis of two β‐thio ketones L1a and L1b is reported. L1a , L1b , and a β‐seleno ketone L1c were successfully employed as ligand precursors in the synthesis of a novel series of cationic titanium complexes 4a – 4c via a well‐established reaction sequence: insertion of the carbonyl functional group into the polarized Ti–C_q,exo bond of the monopentafulvene complex Cp*Ti(Cl)(π‐η⁵:σ–η¹‐C₅H₄=CR₂) ( 1 ) (CR₂ = adamantylidene), subsequent methylation, and final activation with B(C₆F₅)₃. The cationic titanium complexes 4a – 4c bear twofold functionalized cyclopentadienyl [Cp,O,Ch (Ch = S, Se)] ligand frameworks built directly in the coordination sphere of the metal, in which the chalcogen ether functionalities do not coordinate to the central metal atoms as demonstrated by NMR experiments. Consequently, Cp,O σ,π chelating ligand systems are formed with free coordination sites at the central titanium atoms and pendant chalcogen ether moieties.     

New Polydentate Trimethylsilyl Chalcogenide Reagents for the Assembly of Polyferrocenyl Architectures

A series of polychalcogenotrimethylsilane complexes Ar(CH₂ESiMe₃)_n, (Ar=aryl; E=S, Se; n=2, 3, and 4) can be prepared from the corresponding polyorganobromide and M[ESiMe₃] (M=Na, Li). These represent the first examples of the incorporation of such a large number of reactive ?ESiMe₃ moieties onto an organic molecular framework. They are shown to be convenient reagents for the preparation of the polyferrocenylseleno‐ and thioesters from ferrocenoyl chloride. The synthesis, structures, and spectroscopic properties of the new silyl chalcogen complexes 1,4‐(Me₃SiECH₂)₂(C₆Me₄) (E=S, 1 ; E=Se, 2 ), 1,3,5‐(Me₃SiECH₂)₃(C₆Me₃) (E=S, 3 ; E=Se, 4 ) and 1,2,4,5‐(Me₃SiECH₂)₄(C₆H₂) (E=S, 5 ; E=Se, 6 ) and the polyferrocenyl chalcogenoesters [1,4‐{FcC(O)ECH₂}₂(C₆Me₄)] (E=S, 7 ; E=Se, 8 ), [1,3,5‐{FcC(O)ECH₂}₃(C₆Me₃)] (E=S, 9 ; E=Se, 10 ) and [1,2,4,5‐{FcC(O)ECH₂}₄(C₆H₂)] (E=S, 11 illustrated; E=Se, 12 ) are reported. The new polysilylated reagents and polyferrocenyl chalcogenoesters have been characterized by multinuclear NMR spectroscopy (¹H, ¹³C, ⁷⁷Se), electrospray ionization mass spectrometry and, for complexes 1 , 2 , 3 , 4 , 7 , 8 , and 11 , single‐crystal X‐ray diffraction. The cyclic voltammograms of complexes 7 – 11 are presented.     

1,3,5,7‐Tetraselena‐2,4,6,8(2,5)‐tetrathiophenaoctaphane

The novel title tetraselenacalix[4]arene, C₁₆H₈S₄Se₄ or [(C₄H₂S)Se]₄, has a centrosymmetric cyclic molecular structure with approximate C_2h molecular symmetry. The four thienyl rings are joined together by Se bridges and exhibit a syn–syn–anti–anti arrangement around the mol­ecule. The lattice consists of skewed stacks of mol­ecules, with chalcogen–chalcogen close contacts binding the stacks together, forming a two‐dimensional network of mol­ecules.     

Intra‐ and intermolecular Se...X (X = Se,O) interactions in selenium‐containing heterocycles: 3‐benzoylimino‐5‐(morpholin‐4‐yl)‐1,2,4‐diselenazole

In the selenium‐containing heterocyclic title compound {systematic name: N‐[5‐(morpholin‐4‐yl)‐3H‐1,2,4‐diselenazol‐3‐ylidene]benzamide}, C₁₃H₁₃N₃O₂Se₂, the five‐membered 1,2,4‐diselenazole ring and the amide group form a planar unit, but the phenyl ring plane is twisted by 22.12 (19)° relative to this plane. The five consecutive N—C bond lengths are all of similar lengths [1.316 (6)–1.358 (6) Å], indicating substantial delocalization along these bonds. The Se...O distance of 2.302 (3) Å, combined with a longer than usual amide C=O bond of 2.252 (5) Å, suggest a significant interaction between the amide O atom and its adjacent Se atom. An analysis of related structures containing an Se—Se...X unit (X = Se, S, O) shows a strong correlation between the Se—Se bond length and the strength of the Se...X interaction. When X = O, the strength of the Se...O interaction also correlates with the carbonyl C=O bond length. Weak intermolecular Se...Se, Se...O, C—H...O, C—H...π and π–π interactions each serve to link the molecules into ribbons or chains, with the C—H...O motif being a double helix, while the combination of all interactions generates the overall three‐dimensional supramolecular framework.     

Theoretical Density Functional Theory insights into the nature of chalcogen bonding between CX2 (X = S,Se, Te) and diazine from monomer to supramolecular complexes

Chalcogen bonding is a noncovalent interaction, highly similar to halogen and hydrogen bonding, occurring between a chalcogen atom and a nucleophilic region. Two density functional theory (DFT) approaches B3LY-D3 and B97-D3 were performed on a series of complexes formed between CX₂ (X = S, Se, Te) and diazine (pyridazine, pyrimidine and pyrazine). Chalcogen atoms prefer interacting with the lone pair of a nitrogen atom rather than with the π-cloud of an aromatic ring. CTe₂ and CSe₂ form a stronger chalcogen bond than CS₂. The electrostatic potential of CX₂ (X = S, Se and Te) reveals the presence of two equivalent σ-holes, one on each chalcogen atom. These CX₂ molecules interact with diazine giving rise to supramolecular interactions. Wiberg bond index and second-order perturbation theory analysis in NBO were performed to better understand the nature of the chalcogen bond interaction.     

Non-Classical Synthons: Supramolecular Recognition by S⋅⋅⋅O Chalcogen Bonding in Molecular Complexes of Riluzole

Classical examples of supramolecular recognition units or synthons are the ones formed by hydrogen bonds. Here, we report the ubiquity of a S⋅⋅⋅O chalcogen bonded synthon observed in a series of supramolecular complexes of the amyotrophic lateral sclerosis drug riluzole. Although the potential of higher chalcogens such as Se and Te to form robust and directional chalcogen bonded motifs is known, intermolecular sulfur chalcogen bonding is considered to be weak owing to the lower polarizability of S atoms. Here, the robustness and electronic nature of a S⋅⋅⋅O chalcogen bonding non-classical synthon, and the origin of its exceptional directionality have been explored. Bond orders of the drug–coformer chalcogen bonding are found to be as high as one third of a single bond, and they are largely ionic in nature. The contribution of the S⋅⋅⋅O chalcogen bonded motifs to the lattice energies of a series of crystals from the Cambridge Structural Database has been analyzed, showing they can be indeed significant, especially in molecules devoid of strong hydrogen bond donor groups.     

Anionic behavior and single-molecule crystal in fullerene confinements: A contribution from DFT energy decomposition and cooperativity analyses

The recently proposed systems of various anions (A) confined inside C₆₀ , A⁻ @ C₆₀ , which in turn behave as large and stable anions, (A @ C₆₀)⁻ , can find potential applications in various fields. On the other hand, it has earlier been shown that from the dihalogens (X₂ ) encapsulated C₆₀ , X₂ @ C₆₀ , only F₂ @ C₆₀ can be introduced as a system in which the cage acts as a cation C₆₀⁺ and interacts with an endohedral anion, F₂⁻ , forming the F₂⁻ @ C₆₀⁺ as a single-molecule crystal compound. In this work, two density functional theory energy decomposition analysis (EDA) schemes, where in one of them the noninteracting kinetic, electrostatic, and exchange-correlation energies come into play while another scheme, called as EDA-SBL, includes the steric, electrostatic, and quantum effects as essential ingredients (S. Liu, J. Chem. Phys. 2007 , 126, 244103), are utilized to find out what energetic components govern the unique characteristics of the (A @ C₆₀)⁻ and X₂ @ C₆₀ confinements. It is shown that the noninteracting kinetic energy and steric energies have important contributions to the total interaction energies for the considered systems. However, there are other confinements for which the electrostatic and exchange-correlation contributions play also imperative roles. Furthermore, we find reasonable correlations between interaction energies and their components as well as the energetic components themselves, leading to an alternative EDA scheme including the noninteracting kinetic, steric, and electrostatic energies for investigations on other endohedral fullerenes. Extending our analyses to large size confinements, Cl⁻ @ C_n with n up to 90 as illustrative examples, the quantitative cooperativity concept is also explored, where the positive and negative cooperativity profiles unveil a specific size of the anionic confinements to form the most stable large anion.     

Zweikernige η5-pentamethylcyclopentadienyl-rhenium-komplexe mit einer chalkogenbrücke. Die molekülstruktur von [(η5-C5Me5)Re(CO)2]2(μ-Se)

We report the synthesis and characterisation of binuclear η⁵-pentamethylcyclopentadienylrhenium complexes, [(η⁵-C₅Me₅)Re(CO)₂]₂(μ-E) (E = S (2), Se (3), Te (4)), containing a chalcogen bridge in addition to a ReRe bond. According to the X-ray structural analysis, 3 possesses approximately C₂ molecular symmetry; the C₅Me₅ ring ligands occupy trans positions with respect to the central Re₂Se unit [d(ReRe) 3.032(1) Å, ∢ ReSeRe 74.9(1)°]. As expected, the complexes of the now complete series [CpRe(CO)₂]₂(μ-E) (E = O (1), S (2), Se (3), Te (4)) show a high degree of similarity in their corresponding mass, IR, ¹H and ¹³C NMR spectra.     

A Quantitative Molecular Orbital Perspective of the Chalcogen Bond

We have quantum chemically analyzed the structure and stability of archetypal chalcogen-bonded model complexes D₂Ch⋅⋅⋅A⁻ (Ch = O, S, Se, Te; D, A = F, Cl, Br) using relativistic density functional theory at ZORA-M06/QZ4P. Our purpose is twofold: (i) to compute accurate trends in chalcogen-bond strength based on a set of consistent data; and (ii) to rationalize these trends in terms of detailed analyses of the bonding mechanism based on quantitative Kohn-Sham molecular orbital (KS-MO) theory in combination with a canonical energy decomposition analysis (EDA). At odds with the commonly accepted view of chalcogen bonding as a predominantly electrostatic phenomenon, we find that chalcogen bonds, just as hydrogen and halogen bonds, have a significant covalent character stemming from strong HOMO−LUMO interactions. Besides providing significantly to the bond strength, these orbital interactions are also manifested by the structural distortions they induce as well as the associated charge transfer from A⁻ to D₂Ch.