尼罗红为探针对芳醚树枝形聚合物微环境的研究

本工作合成了一系列羧基为外围末端基团的芳醚树枝形聚合物Gn(n=1—4),利用吸收光谱,稳态和时间分辨荧光发射光谱研究了Gn对尼罗红分子的增溶作用和Gn微环境极性.研究结果表明,尼罗红在Gn中的溶解度随代数增加而增大,从G1到G4,尼罗红溶解度相比水中分别增加了3、35、47和215倍.Gn的微环境极性比水低,2-4代芳醚树枝形聚合物具有相似的微环境极性.     

Fluorescence turn-on probe for biothiols: intramolecular hydrogen bonding effect on the Michael reaction

Weakly fluorescent coumarinyl enones are rapidly transformed into strongly fluorescent molecules through the Michael addition reaction of a thiol group, where an intramolecular hydrogen bond plays a critical role in the reaction rate. The molecular probe (3) with an ortho hydroxyl group to a carbonyl group exhibits a rapid response toward GSH owing to the stabilization of the possible oxyanion intermediate by a preferable intramolecular hydrogen bond. Probe 1 with an o-hydroxyl group also showed a moderately enhanced reaction rate with GSH and soluble in HEPES buffer to exhibit a highly selective and sensitive fluorescence turn-on response toward biothiols.     

Fluorescence lifetime probe of biomolecular conformations

Methods have been developed to measure the fluorescence lifetime versus temperature of trapped biomolecular ions derivatized with a fluorescent dye. Previous measurements for different sequences of polyproline peptides demonstrated that quenching rates are related to conformations and their spatial fluctuations. This paper presents the results of extending these methods to study the conformational dynamics of larger biomolecules. Vancomycin-peptide noncovalent complexes in the 1+ charge state were studied as a function of temperature for different W-KAA peptide chiralities (L-LDD, D-LDD, L-DLL). Fluorescence-quenching rates, k_q, were found to be stereoselective for these different chiralities with relative magnitudes k_q(L-LDD)>k_q(D-LDD)>k_q(L-DLL). The variation in fluorescent quenching resulting from switching the chirality of the single Trp residue was readily detectable. Molecular dynamics analysis of complexes formed by W-KAA (L-LDD) and W-KAA(L-DLL) indicates that increased flexibility in the (L-DLL) complex is correlated with reduced quenching rates. Fluorescence measurements were also performed for the Trp-cage protein comparing quenching rates in the 1+, 2+, and 3+ charge states for which k_q⁺≫k_q²⁺≈k_q³⁺. Measurements of a sequence including a single-point mutation infer the presence of a salt-bridge structure in the 1+ charge state and its absence in both the 2+ and 3+ states. Molecular dynamics structures of Trp-cage indicate that a salt bridge in the 1+ charge state produces more compact conformations leading to larger quenching rates based on the quenching mechanism. In both these experimental studies the fluorescence-quenching rates were consistent with changes in structure induced by either intermolecular or intramolecular interactions.     

Fluorescence lifetime of terbium(III) as a probe for the ion-binding properties of tactic poly(methacrylic acids)

The binding properties of trivalent metal ions to polyelectrolytes were investigated through the use of terbium [Tb(III)] in fluorescence studies. The fluorescence intensity and lifetimes of the lanthanide ions are directly dependent upon the number of water molecules bound to their inner coordination sphere. The more efficiently a ligand coordinates to a lanthanide ion, the more water molecules are expelled and consequently, the greater the fluorescence intensity and lifetime. This effect was used to probe for differences in the complexation behavior of tactic polymers. Aqueous solutions of isotactic and syndiotactic poly(methacrylic acid) (PMA) were neutralized and complexed with Tb(III) ions. The fluorescence intensity of the 286 nm hypersensitive excitation band was monitored and the lifetimes were measured using several excitation wavelengths. It was found that the isotactic PMA/Tb(III) complex exhibited a six times greater fluorescence intensity than the syndiotactic PMA complex. Lifetime measurements gave the number of water molecules coordinated by Tb(III) in the isotactic complex to be 2.4 while 3.4 waters remained bound to the Tb(III) ion in the syndiotactic PMA complex. These results indicate that isotactic PMA has the greater binding affinity towards Tb(III) ions. © 1997 John Wiley & Sons, Inc.     

LZnX complexes of tripodal ligands with intramolecular RN-H hydrogen bonding groups: structural implications of a hydrogen bonding cavity, and of X/R in the hydrogen bonding geometry/strength

Tripodal ligands N(CH2Py)3-n(CH2Py-6-NHR)n(R=H, n=1-3 L1-3, n=0 tpa; R=CH2tBu, n=1-3 L'1-3) are used to investigate the effect of different hydrogen bonding microenvironments on structural features of their LZnX complexes (X=Cl-, NO3-, OH-). The X-ray structures of [(L2)Zn(Cl)](BPh4)2.0.5(H2O.CH3CN), [(L3)Zn(Cl)](BPh4)3.CH3CN, [(L'1)Zn(Cl)](BPh4) 1', [(L'2)Zn(Cl)](BPh4)2'.CH3OH, and [(L'3)Zn(Cl)](BPh4)3' have been determined and exhibit trigonal bipyramidal geometries with intramolecular (internal) N-HCl-Zn hydrogen bonds. The structure of [(L'2)Zn(ONO2)]NO3 4'.H2O with two internal N-HO-Zn hydrogen bonds has also been determined. The axial Zn-Cl distance lengthens from 2.275 A in [(tpa)Zn(Cl)](BPh4) to 2.280-2.347 A in 1-3, 1'-3'. Notably, the average Zn-N(py) distance is also progressively lengthened from 2.069 A in [(tpa)Zn(Cl)](BPh4) to 2.159 and 2.182 A in the triply hydrogen bonding cavity of 3 and 3', respectively. Lengthening of the Zn-Cl and Zn-N(py) bonds is accompanied by a progressive shortening of the trans Zn-N bond from 2.271 A in [(tpa)Zn(Cl)](BPh4) to 2.115 A in 3 (2.113 A in 3'). As a result of the triply hydrogen bonding microenvironment the Zn-Cl and Zn-N(py) distances of 3 are at the upper end of the range observed for axial Zn-Cl bonds, whereas the axial Zn-N distance is one of shortest among N4 ligands that induce a trigonal bipyramidal geometry. Despite the rigidity of these tripodal ligands, the geometry of the intramolecular RN-HX-Zn hydrogen bonds (X=Cl-, OH-, NO3-) is strongly dependent on the nature of X, however, on average, similar for R=H, CH2tBu.     

以尼罗红为探针对新型两亲性树枝形聚合物微环境的研究

本工作合成了一系列外围以三缩四乙二醇单甲醚修饰的烷基芳醚骨架两亲性树枝形聚合物Gn(n=0—3),化合物通过了¹H-NMR,IR和MALDI-TOF-MS的表征.利用吸收光谱,稳态和时间分辨荧光光谱研究了水溶液中Gn对尼罗红分子的增溶作用以及Gn内部微环境的极性.研究结果表明,高代数树枝形聚合物Gn对尼罗红具有更好的增溶效果.1—3代树枝形聚合物Gn内部疏水孔腔微环境极性随代数增加而逐渐降低,G1和G2树枝形聚合物具有相似的微环境极性,而由于构象的变化使G3具有更加疏水的微环境.     

尼罗红在离子表面活性剂水溶液中的荧光特性

尼罗红(NR)分子具有大的芳香环和基态时可与水分子形成氢键的吸电子基, 它对增溶在表面活性剂胶束栅栏层的环境尤其敏感, 在十二烷基三甲基溴化铵(C12TABr)胶束水溶液中表现为双重荧光, 最大发射波长分别位于578和630 nm. 十二烷基硫酸钠(SDS)胶束的反离子解离度大于C12TABr胶束, 这不仅增大了NR周边环境的极性, 也增多了溶剂化水, 导致与NR氢键作用增强, 荧光强度低于C12TABr, 但有效促进了分子内扭转电荷转移(TICT)激发态形成, 其布居甚至可达到98%以上, 表观上仅出现了在634 nm的单重荧光峰. NR对环境的敏感特性很好地反映了Gemini表面活性剂初始形成胶束的残缺结构信息, 是检测这类具有强烈相互作用两亲分子聚集行为的良好探针.     

Positron lifetime spectroscopy as a probe of nanoporosity of cement-based materials

Hydrating cement pastes prepared with water-to-cement ratio equal to 0.5 in weight were investigated through positron annihilation lifetime spectroscopy over a period of 4 weeks. Two series of samples were prepared using different pre-treatment procedures, in order to assess the influence of sample manipulations on positron annihilation measurements. The technique is sensitive to changes in the pore structure with ageing time. Moreover, from the positron data an estimate of the first two moments of radii distribution of the nanopores was obtained.     

Fluorescence spectroscopic evidence for hydrogen bonding and deprotonation equilibrium between fluoride and a thiourea derivative

Interaction of anions with thiourea-linked acridinedione fluorophore was studied by absorption, (1)H NMR, steady-state and time-resolved fluorescence techniques. Addition of AcO(-) and H(2)PO(4)(-) shows a genuine H-bonded complex with thiourea receptor; whereas, F(-) shows stepwise H-bonding and deprotonation of thiourea NH as confirmed by (1)H NMR titration. Free receptor 1 shows emission maximum at 418 nm; whereas, H-bonded complex of 1·F(-) shows a new redshifted emission maximum at 473 nm and the deprotonated 1 exhibits an emission peak at 502 nm. Presence of these three different emitting species was probed by 3D emission spectroscopic studies. Equilibrium between the free receptor 1, 1·F(-) H-bonded complex and deprotonated 1 was confirmed by time-resolved fluorescence studies. Time-resolved area normalised emission spectra (TRANES) of 1 in the presence of F(-) shows two isoemissive points at 456 and 479 nm between time delays of 0-0.5 ns and 1-20 ns, respectively, due to the existence of three emitting species in equilibrium. Observation of such an equilibrium based on fluorescence spectroscopic studies further proves the earlier reported absorption and (1)H NMR spectroscopic studies of H-bonding and deprotonation processes and also illustrates the dynamics of anion-receptor interactions.     

Fluorescence study of arene probe microenvironment in the intraparticle void volume of zeolites interfaced with bathing polar solvents

Fluorescence methodologies have been utilized to examine micropolarity, intramolecular motion, and singlet quenching in the intraparticle void volume of zeolites X, Y, and ultrastable Y (USY) interfaced with bathing polar solvents. Micropolarity was assessed from the 3-to-1 band ratio (III/I) of the fluorescence spectrum of pyrene (PY) and from lambda(max) of the fluorescence spectrum of 1-pyrenecarboxaldehyde (1-PCA). In zeolites bathed in anhydrous solvents, both PY and 1-PCA reported increased micropolarity according to the trend USY < bulk solvent < NaX approximately NaY. For example, in NaY (USY), III/I ranged from 0.44 (0.98) in acetonitrile to 0.52 (1.34) in n-hexanol, compared to 0.60, 1.06, and 1.62 in bulk acetonitrile (ACN), n-hexanol, and n-hexane, respectively. The polarity studies reveal that the ionic nature of NaX and NaY and the hydrophobic nature of USY strongly influence the microenvironment of the arene despite the presence of desorbing polar solvents. Constraints on intramolecular motion were examined in polar-solvated NaX through measurements of the fluorescence lifetime of trans-stilbene. Lifetimes ranged from 113 ps in NaX-ACN to 671 ps in NaX-tert-butyl alcohol. The latter value is close to that observed in bulk glycerol. Diffusion-controlled quenching of PY fluorescence by O2 and a series of nitrocompounds dissolved in solvents bathing the zeolite was examined by a time-resolved approach. For all of the quenchers and solvents studied, quenching was more efficient in USY compared to NaX and NaY. Interestingly, the rate of O2 quenching in USY-MeOH was only 12 times lower than that in bulk MeOH. In contrast, in NaY-MeOH and NaX-MeOH the rate of O2 quenching was too low to be measured. The rate constants in these systems were therefore taken as the rate constant for diffusion-controlled quenching of trapped electrons measured previously. These values were 600 times and 10(5) times lower than the rate of fluorescence quenching in USY-MeOH, respectively. The O2 quenching studies show that dispersive interactions of polar solvents with the cavity walls dominate in USY because of the hydrophobic nature of the USY surface. In NaX and NaY, stronger ion-dipole and hydrogen bonding interactions dominate and lead to more restricted access and lowered quenching efficiency. Perrin (or static) quenching of pyrene fluorescence was also examined to infer the concentration of nitromethane (NM) in the void volume of NaX and NaY bathed in MeOH, ACN, or H2O. The results indicate that access of NM to the interior of NaY is more inhibited in ACN compared to MeOH, presumably because of the higher dipole moment of ACN and its resulting stronger association with the zeolite surface. At similar levels of static quenching equated to a similar NM concentration in the zeolite, dynamic quenching by NM varied by no more than a factor of 2 in all systems compared. This implies that the rate of NM diffusion in solvated zeolite interiors is similar regardless of zeolite or solvent properties. In contrast to O2 diffusion in zeolites, NM exhibits a high dipole moment and can therefore migrate through polar-solvated zeolite apertures by adsorbing to the zeolite. Overall, the results of this study show a close relationship between the behavior of probes and quenchers in the confines of polar-solvated zeolite interiors and the chemical properties of the zeolite. Differences between weakly and strongly interacting surfaces are revealed clearly in the results.     

DNA-Naphthyl Red conjugate as a visualizing probe of DNA hybridization

The Naphthyl Red moiety, conjugated to DNA, shows distinct chromism by hybridization with its complementary DNA. Single-stranded DNA involving the Naphthyl Red moiety exhibits an orange color and has lambda(max) at 466 nm at pH 7.0. The absorption maximum is shifted towards 545 nm by the presence of its complementary DNA, and the color of the solution changes from orange to magenta accordingly.     

Fluorescence lifetime fluctuations of single molecules probe local density fluctuations in disordered media: a bulk approach

We investigated the nanometer scale mobility of polymers in the glassy state by monitoring the dynamics of embedded single fluorophores. Recently we reported on fluorescence lifetime fluctuations which reflect the segmental rearrangement dynamics of the polymer in the surroundings of the single molecule probe. Here we focus on the nature of these fluorescence lifetime fluctuations. First the potential role of quenching and molecular conformational changes is discussed. Next we concentrate on the influence of the radiative density of states on the spontaneous emission of individual dye molecules embedded in a polymer. To this end we present a theory connecting the effective-medium theory to a cell-hole model, originating from the Simha-Somcynsky free-volume theory. The relation between the derived distributions of free volume and fluorescence lifetime allows one to determine the number of segments involved in the local rearrangement directly from experimental data. Results for two different polymers as a function of temperature are presented.     

On the strength of hydrogen bonding within water clusters on the coordination limit

Hydrogen bonds (HB) are arguably the most important noncovalent interactions in chemistry. We study herein how differences in connectivity alter the strength of HBs within water clusters of different sizes. We used for this purpose the interacting quantum atoms energy partition, which allows for the quantification of HB formation energies within a molecular cluster. We could expand our previously reported hierarchy of HB strength in these systems (Phys. Chem. Chem. Phys., 2016, 18 , 19557) to include tetracoordinated monomers. Surprisingly, the HBs between tetracoordinated water molecules are not the strongest HBs despite the widespread occurrence of these motifs (e.g., in ice I_h). The strongest HBs within H₂O clusters involve tricoordinated monomers. Nonetheless, HB tetracoordination is preferred in large water clusters because (a) it reduces HB anticooperativity associated with double HB donors and acceptors and (b) it results in a larger number of favorable interactions in the system. Finally, we also discuss (a) the importance of exchange-correlation to discriminate among the different examined types of HBs within H₂O clusters, (b) the use of the above-mentioned scale to quickly assess the relative stability of different isomers of a given water cluster, and (c) how the findings of this research can be exploited to indagate about the formation of polymorphs in crystallography. Overall, we expect that this investigation will provide valuable insights into the subtle interplay of tri- and tetracoordination in HB donors and acceptors as well as the ensuing interaction energies within H₂O clusters.     

Ethylenediamine as a liquid chemical reagent to probe hydrogen bonding and host-guest interactions with crown ethers in an ion trap tandem mass spectrometer

Ethylenediamine (EDA) was used as a novel liquid chemical reagent to probe hydrogen bonding and host-guest interactions with crown ether derivatives in an ion trap mass spectrometer (ITMS). Selective ion/molecule reaction product ions were generated by reactions of EDA with oxygenated and aza-crown ethers. For the oxygenated crown ethers, glycols and dimethylglycols, ion/molecule reactions led to the formation of the protonated molecules ([M+H](+)) and adduct ions including [M+30](+), [M+44](+) and [M+61](+). The aza-crown ethers produced [M+H](+), [M+13](+) and [M+27](+) ions. Collisionally activated dissociation (CAD) experiments were applied to probe the binding strength of these ion/molecule reaction products. CAD results indicated that all these hydrogen-bonding complexes are weakly bound except for the [M+44](+) ion of 18-crown-6, since all the complexes dissociate to the protonated polyether and/or protonated EDA. Fragmentation of the [M+H](+) ions under CAD conditions indicates the extensive covalent bond cleavage of the protonated crown ether skeleton.     

Fluorescence lifetime fluctuations of single molecules probe the local environment of oligomers around the glass transition temperature

Single molecule fluorescence experiments have been performed on a BODIPY-based dye embedded in oligo(styrene) matrices to probe the density fluctuations and the relaxation dynamics of chain segments surrounding the dye molecules. The time-dependent fluorescence lifetime of the BODIPY probe was recorded as an observable for the local density fluctuations. At room temperature, the mean fraction of holes surrounding the probes is shown to be unaffected by the molecular weight in the glassy state. In contrast, the free volume increases significantly in the supercooled regime. These observations are discussed in the framework of the entropic theories of the glass transition.     

Weak hydrogen bonding as a basis for concentration-dependent guest selectivity by a cyclophane host

Crystalline inclusion complexes between the cyclophane 1 and three isomers of picoline and lutidine were grown and their properties and structures were studied by X-ray analysis, thermal gravimetry (TG), and differential scanning calorimetry (DSC). In competition experiments, the cyclophane host, which by itself is only able to form weak Cbond;H.acceptor hydrogen bonds, is able to discriminate between the different picoline or lutidine isomers, although in some cases a strong concentration dependence of the preferred isomer is observed. In the three-component experiments, inclusion of 4-picoline is strongly favored when X(4-picoline)>0.35-0.39. Very similar results were obtained in the lutidine series. The fact that 2,4-lutidine is favored when X(2,4-lutidine)>0.2 indicates that the host prefers the isomer with the methyl group in 4-position relative to the nitrogen atom. The selectivities observed can be explained based on the assignment of the inclusion complexes to different adduct classes. In the case of the picoline isomers, the preference of 4-picoline was in good agreement with the calculated lattice energies for this series. The present work also shows that caution is advisable when deducing selectivity of crystalline inclusion compounds from guest competition experiments.     

Solvent-dependent radiationless transitions in fluorenone: A probe for hydrogen bonding interactions in the cyclodextrin cavity

Fluorescence lifetimes fluorescence quantum yields and triplet yields were measured for fluorenone in various hydroxylic and non-hydroxylic solvents, and in-cyclodextrin complexes. The rate of singlet-triplet intersystem crossing, which decreases with increasing polarity, was found to be a good indicator of nonspecific solvent-solute interactions, while the rate of direct internal conversion from the singlet excited state was correlated with hydrogen bonding. The fast internal conversion of singlet excited fluorenone/-cyclodextrin complexes shows that the probe molecule, while embedded within the cyclodextrin cavity, still remains hydrogen bonded.Dedicated to Professor Szejtli.     

Fluorescence depolarization for a probe in a cylindrical phase

A theory is presented relating polarized fluorescence intensities to orientational order parameters and correlation functions for a probe reorienting in a mesophase with local uniaxial symmetry and a random distribution of directors in a plane perpendicular to the axis of a macroscopically cylindrical structure. The theory should be applicable, for example, to experiments on lyotropic hexagonal phases as well as on nerve membranes. Explicit results are given for probes with transition moments parallel or perpendicular to the molecular axis.     

Fluorescence determination of DNA with 1-pyrenebutyric acid nanoparticles coated with beta-cyclodextrin as a fluorescence probe

A novel ultrasonication method has been successfully developed for the preparation of 1-pyrenebutyric acid (PBAC)/beta-cyclodextrin(beta-CD) complex nanoparticles. The as-prepared nanoparticles are characterized by transmission electron microscopy (TEM), fluorescence excitation and emission spectroscopy. Complex nanoparticles prepared with ultrasonication are smaller and better dispersed than single PBAC nanoparticles. At pH 3.0, the relative fluorescence intensity of complex nanoparticles of PBAC/beta-CD can be quenched by the concentration of DNA. Based on this, a novel fluorimetric method has been developed for rapid determination of DNA. In comparison with single organic fluorophores, these nanoparticle probes are better water-solubility, more stable and do not suffer from blinking. Under optimum conditions, the calibration graphs are linear over the range 0.2-15 microg mL(-1) for calf thymus DNA (ct-DNA) and 0.3-12 microg mL(-1) for fish sperm DNA (fs-DNA). The corresponding detection limit is 0.01 microg mL(-1) for ct-DNA and 0.02 microg mL(-1) for fs-DNA. The relative standard deviation of seven replicate measurements is 1.2% for 2.0 microg mL(-1) ct-DNA and 1.4% for 2.0 microg mL(-1) fs-DNA, respectively. The method is simple and sensitive. The recovery and relative standard deviation are very satisfactory. A mechanism proposed to explain the process also has been studied.