Alkenyl selenols and selenocyanates: synthesis, spectroscopic characterization by photoelectron spectroscopy, and quantum chemical study

Vinyl, allyl, and homoallyl selenols were easily prepared by a chemoselective reduction of the corresponding selenocyanates with aluminum hydrides. Two stable vinyl and five stable allyl conformers of both series were predicted on the potential-energy surface. The interaction of SeH or SeCN groups with the vinyl group has been investigated with UV photoelectron spectroscopy and quantum chemical calculations, using the MP2/cc-pVTZ and B3LYP/cc-pVTZ levels. In the vinyl derivatives, a surprisingly strong direct conjugation of the selenium lone electron pair and the C=C double bond was observed. On the other hand, in allyl position the selenium lone pair is independent on the C=C double bond, and the hyperconjugation between the Se-C bond and the double bond is the ruling effect. Thus is clarified the type and extent of the interaction between the SeH or SeCN group and the unsaturated moiety.     

Stereochemical activity of lone pairs of electrons and supramolecular aggregation patterns based on secondary interactions involving tellurium in its 1,1-dithiolate structures

A survey of the crystallographic literature of tellurium(II)/(IV) 1,1-dithiolates (dithiocarbamate, xanthate, dithiophosphate, or dithiophosphinate) is presented. Coordination numbers range from a low of three in some organotellurium(II) 1,1-dithiolates to a high of eight in the binary tellurium(IV) dithiocarbamates. The coordination geometries are rich and varied due to the stereochemical influence exerted by up to two lone pairs of electrons and the penchant of tellurium to increase its coordination number by forming secondary Te?X interactions, where X = sulphur, halide, tellurium, oxygen, and, in one case, a π system defined by a four-membered TeS₂C chelate. Stereochemical roles of the lone pairs of electrons are always evident in the tellurium(II) structures. By contrast, a stereochemical position is not always evident for the lone pair of electrons in the tellurium(IV) derivatives, in particular in circumstances where the tellurium centre has a high coordination number. Supramolecular aggregation mediated by Te?X secondary interactions often leads to the formation of dimeric aggregates but sometimes to supramolecular polymers, and rarely three-dimensional networks. Comparisons between closely related structures clearly indicate that the dithiocarbamate ligand is a more effective chelating ligand compared with the other 1,1-dithiolate ligands covered in this survey. This difference in coordinating ability is clearly correlated with the observation that non-dithiocarbamate structures are more likely to form high-dimensional supramolecular architectures.     

Interaction of C-Si, C-Sn, and Si-Si sigma-bonds with chalcogen lone pairs

The ability of neighboring C-Si, C-Sn, and Si-Si groups in conformationally constrained cyclic molecules to reduce the lowest ionization energies of sulfur, selenium, and tellurium compounds has been determined by charge-transfer spectroscopy of complexes with tetracyanoethylene. For selected compounds, ionization energies were determined by gas-phase photoelectron spectroscopy. The lowest ionization energies measured by photoelectron spectroscopy, with one exception, correlate with the charge-transfer spectroscopic data. In addition, theoretical analysis has provided insight into the photoelectron spectra and the geometry-dependent interaction between C-Si or C-Sn bonds and chalcogen lone pairs. Substantial lowering of ionization energies is found which is anticipated to have important consequences in the chemistry of these and related species.     

Synthetic and Structural Studies of 1,8‐Chalcogen Naphthalene Derivatives

Four novel 1,8‐disubstituted naphthalene derivatives 4 – 7 that contain chalcogen atoms occupying the peri positions have been prepared and fully characterised by using X‐ray crystallography, multinuclear NMR spectroscopy, IR spectroscopy and MS. Molecular distortion due to noncovalent substituent interactions was studied as a function of the bulk of the interacting chalcogen atoms and the size and nature of the alkyl group attached to them. X‐ray data for 4 – 7 was compared to the series of known 1,8‐bis(phenylchalcogeno)naphthalenes 1 – 3 , which were themselves prepared from novel synthetic routes. A general increase in the E???E′ distance was observed for molecules containing bulkier atoms at the peri positions. The decreased S???S distance from phenyl‐ 1 and ethyl‐ 4 analogues is ascribed to a weaker chalcogen lone pair–lone pair repulsion acting in the ethyl analogue due to the presence of two equatorial S(naphthyl) ring conformations. Two novel peri‐substituted naphthalene sulfoxides of 1 , Nap(O?SPh)(SPh) 8 and Nap(O?SPh)₂ 9 , which contain different valence states of sulfur, were prepared and fully characterised by using X‐ray crystallography and multinuclear NMR spectroscopy, IR spectroscopy and MS. Molecular structures were analysed by using naphthalene ring torsions, peri‐atom displacement, splay angle magnitude, S???S interactions, aromatic ring orientations and quasi‐linear O?S???S arrangements. The axial S(naphthyl) rings in 8 and 9 are unfavourable for S???S contacts due to stronger chalcogen lone pair–lone pair repulsion. Although quasi‐linear O?S???S alignments suggest attractive interaction is conceivable, analysis of the B3LYP wavefunctions affords no evidence for direct bonding interactions between the S atoms.     

N‐Heterocyclic Carbene (NHC)‐Stabilized Silanechalcogenones: NHC→Si(R2)E (E=O,S, Se,Te)

A series of N‐heterocyclic carbene‐stabilized silanechalcogenones 2 a , b (Si?O), 3 a , b (Si?S), 4 a , b (Si?Se), and 5 a , b (Si?Te) are described. The silanone complexes 2 a , b were prepared by facile oxygenation of the carbene–silylene adducts 1 a , b with N₂O, whereas their heavier congeners were synthesized by gentle chalcogenation of 1 a , b with equimolar amounts of elemental sulfur, selenium, and tellurium, respectively. These novel compounds have been isolated in a crystalline form in high yields and have been fully characterized by a variety of techniques including IR spectroscopy, ESIMS, and multinuclear NMR spectroscopy. The structures of 2 b , 3 a , 4 a , 4 b , and 5 b have been confirmed by single‐crystal X‐ray crystallography. Due to the NHC→Si donor–acceptor electronic interaction, the Si?E (E=O, S, Se, Te) moieties within these compounds are well stabilized and thus the compounds possess several ylide‐like resonance structures. Nevertheless, these species also exhibit considerable Si?E double‐bond character, presumably through a nonclassical Si?E π‐bonding interaction between the chalcogen lone‐pair electrons and two antibonding Si? N σ* orbitals, as evidenced by their high stretching vibration modes and the shortening of the Si–E distances (between 5.4 and 6.3 %) compared with the corresponding Si? E single‐bond lengths.     

The Competition between Spin Orbit Coupling and Conjugation in Alkyl Halides and its Repercussion on their Photoelectron Spectra

A crude molecular orbital model for alkyl halides is proposed, which provides a semi-quantitative rationalization for the following experimental observations: (a) In the photoelectron spectra of alkyl halides RX (symmetry C₈) the lone pair band is split into two components, separated by a gap Δ. This gap is equal to the splitting associated with spin-orbit coupling in systems where X lies on a symmetry axis of order n ≥ 3. (b) The vibrational pattern of the two components indicates substantial conjugation between R and X. (c) Notwithstanding (b), the gap Δ is largely independent of the type of alkyl group R. (d) For strongly conjugating alkyl groups (e. g. R = cyclopropyl) the first component of the lone pair band (i. e. the one at lower ionization potential) broadens while the one at higher potential sharpens up.     

The nature of the supramolecular association of 1,2,5-chalcogenadiazoles

Organochalcogen-nitrogen heterocycles such as the 1,2,5-chalcogenadiazoles have a distinct tendency to establish intermolecular links in the solid state through secondary bonding interactions E...N (E = S, Se, Te). The association of these molecules was examined in detail using relativistic density functional theory. Although there is an important electrostatic component, the interaction between these molecules is dominated by contributions arising from orbital mixing, which can be interpreted as the donation of a nitrogen lone pair into the chalcogen-centered antibonding orbitals. Because of its more polar character and lower-lying antibonding orbitals, the tellurium derivatives possess the strongest association energies; these are so large that the binding strength is comparable to that of some hydrogen bonds. In the absence of steric constraints, telluradiazoles associate in a coplanar fashion forming ribbon polymers. However, bulky susbstituents could be used to direct the formation of either helical chains or discrete dimers. In addition to its strength, the coplanar dimer is characterized by being rigid, yet no activation barrier is expected for the association/dissociation process. These attributes strongly indicate that tellurium-nitrogen heterocycles have great potential as building blocks in supramolecular architecture.     

Room-temperature reaction of laser-photolytically generated Te nanosols with silver

KrF laser photolysis of diphenyl ditelluride in 2-propanol yields a stable solution of tellurium nanosols, which reacts with immersed Ag sheets to yield thin silver telluride films. The nanosols were identified by UV–vis spectroscopy and the films were characterized by electron microscopy, X-ray photoelectron spectroscopy and X-ray diffraction analysis. It is revealed that the films are mostly amorphous and contain small contributions of cubic as well as monoclinic Ag₂Te structures. The procedure provides the first example of the fast formation of silver telluride thin films by reaction between the elements in inert solvent at room-temperature.     

Synthetic and Structural Studies of 1‐Halo‐8‐(alkylchalcogeno)naphthalene Derivatives

A series of eight 1‐halo‐8‐(alkylchalcogeno)naphthalene derivatives ( 1 – 8 ; halogen=Br, I; alkylchalcogen=SEt, SPh, SePh, TePh) containing a halogen and a chalcogen atom occupying the peri positions have been prepared and fully characterised by using X‐ray crystallography, multinuclear NMR spectroscopy, IR spectroscopy and MS. Naphthalene distortion due to non‐covalent substituent interactions was studied as a function of the bulk of the interacting chalcogen atoms and the size and nature of the alkyl group attached to them. X‐ray data for 1 , 2 , 4 and 5 – 8 were compared. Molecular structures were analysed in terms of naphthalene ring torsions, peri‐atom displacement, splay angle magnitude, X???E interactions, aromatic ring orientations and quasi‐linear X???E? C arrangements. A general increase in the X???E distance was observed for molecules that contain bulkier atoms at the peri positions. The I???S distance of 4 is comparable with the I???Te distance of 8 , and is ascribed to a stronger lone pair–lone pair repulsion due to the presence of an axial S(naphthyl) ring conformation. Density functional theory (B3LYP) calculations performed on 5 – 8 revealed Wiberg bond index values of 0.05–0.08, which indicate minor interactions taking place between the non‐bonded atoms in these compounds.     

A Series of Isolable Silanoic Thio‐, Seleno‐, and Telluroesters (LSi(X)OR) with Donor‐Supported SiX Double Bonds (L=β‐Diketiminate; X=S,Se, Te)

The first silicon analogues of carbonic (carboxylic) esters, the silanoic thio‐, seleno‐, and tellurosilylesters 3 (Si?S), 4 (Si?Se), and 5 (Si?Te), were prepared and isolated in crystalline form in high yield. These thermally robust compounds are easily accessible by direct reaction of the stable siloxysilylene L(Si:)OSi(H)L′ 2 (L=HC(CMe)₂[N(aryl)₂], L′=CH[(C?CH₂)‐CMe][N(aryl)]₂; aryl=2,6‐iPr₂C₆H₃) with the respective elemental chalcogen. The novel compounds were fully characterized by methods including multinuclear NMR spectroscopy and single‐crystal X‐ray diffraction analysis. Owing to intramolecular N→Si donor–acceptor support of the Si?X moieties (X=S, Se, Te), these compounds have a classical valence‐bond N⁺–Si–X^? resonance betaine structure. At the same time, they also display a relatively strong nonclassical Si?X π‐bonding interaction between the chalcogen lone‐pair electrons (n_π donor orbitals) and two antibonding Si? N orbitals (σ*_π acceptor orbitals mainly located at silicon), which was shown by IR and UV/Vis spectroscopy. Accordingly, the Si?X bonds in the chalcogenoesters are 7.4 ( 3 ), 6.7 ( 4 ), and 6.9 % ( 5 ) shorter than the corresponding Si? X single bonds and, thus, only a little longer than those in electronically less disturbed Si?X systems (“heavier” ketones).     

Atmospheric pressure chemical vapour deposition of selenium and tellurium films by UV laser photolysis of diethyl selenium and diethyl tellurium

Excimer laser‐induced photolysis of gaseous diethyl selenium and diethyl tellurium (C₂H₅)₂M (M = Se, Te) is controlled by cleavage of both M? C bonds, it yields C₁–C₄ hydrocarbons (ethene as major product) and results in chemical vapour deposition of selenium films and nanosized tellurium powder. The selenium and tellurium properties were characterized by X‐ray photoelectron spectroscopy and Scanning electron Microscopy techniques. Copyright © 2001 John Wiley & Sons, Ltd.     

Resonance‐Assisted Intramolecular Chalcogen–Chalcogen Interactions?

High-level B3LYP/6-311+G(3df,2p) density functional calculations have been carried out for a series of saturated chalcogenoaldehydes: CH(X)-CH(2)-CH(2)YH (X, Y=O, S, Se, Te). Our results indicate that in CH(X)-CH(2)-CH(2)YH (X=Y=O, S, Se) the X-H...X intramolecular hydrogen bond (IHB) competes in strength with the X...XH chalcogen-chalcogen interaction, while the opposite is found for the corresponding tellurium-containing analogues. For those derivatives in which X does not equal Y, X being the more electronegative atom, the situation is more complicated due to the existence of two non-equivalent X-H and Y-H tautomers. The Y-H tautomer is found to be lower in energy than the X-H tautomer, independently of the nature of X and Y. For X=O, S, Se and Y=S, Se the most stable conformer b is the one exhibiting a Y-H...X IHB. Conversely when Y=Te, the chelated conformer d, stabilized through a X...YH chalcogen-chalcogen interaction is the global minimum of the potential energy surface. Systematically the IHB and the chalcogen-chalcogen interactions observed for saturated compounds are much weaker than those found for their unsaturated analogues. This result implies that the nonbonding interactions involving chalcogen atoms, mainly Se and Te, are not always strongly stabilizing. This conclusion is in agreement with the fact that intermolecular interactions between Se and Te containing systems with bases bearing dative groups are very weak. We have also shown that these interactions are enhanced for unsaturated compounds, through an increase of the charge delocalization within the system, in a mechanism rather similar to the so call Resonance Assisted Hydrogen Bonds (RAHB). The chalcogen-chalcogen interactions will be also large, due to the enhancement of the X-->Y dative bond, if the molecular environment forces the interacting atoms X and Y to be close each other.     

Synthesis, gas-phase photoelectron spectroscopic, and theoretical studies of stannylated dinuclear iron dithiolates

Stannylated dinuclear iron dithiolates (mu-SSnMe(2)CH(2)S)[Fe(CO)(3)](2), (mu-SCH(2)SnMe(2)CH(2)S) [Fe(CO)(3)](2), and (mu-SCH(2)SnMe(3))(2)[Fe(CO)(3)](2), which are structurally similar to the active site of iron-only hydrogenase, were synthesized and studied by gas-phase photoelectron spectroscopy. The orbital origins of ionizations were assigned by comparison of He I and He II photoelectron spectra and with the aid of hybrid density functional electronic structure calculations. Stannylation lowers the ionization energy of sulfur lone pair orbitals in these systems owing to a geometry-dependent interaction. The Fe-Fe sigma bond, which is the HOMO in all these systems, is also substantially destabilized by stannylation due to a previously unrecognized geometry-dependent interaction between axial sulfur lone pair orbitals and the Fe-Fe sigma bond. Since cleaving the Fe-Fe sigma bond is a key step in the mechanism of action of iron-only hydrogenase, these newly recognized geometry-dependent interactions may be utilized in designing biologically inspired hydrogenase catalysts.     

Nitrogen lone pair interactions in organic molecules: a photoelectron spectroscopic study

The electronic structure of several cyclic, saturated and unsaturated amines and imines has been investigated by UV photoelectron spectroscopy (UPS). The analysis of spectra has been performed with DFT and OVGF calculations and comparison with the UPS spectra of related compounds. The extent and type of nitrogen lone pair interactions is discussed because nitrogen lone pairs are the most important functional groups present in these molecules. The magnitude of interactions was found to depend on the spatial orientation and rigidity of mutual positions of the lone pairs, rather than on their spatial distance.     

Are Unsaturated Isocyanides so Different from the Corresponding Nitriles?

Simple unsaturated and cyclopropylic isocyanides are synthesized by an efficient and simple approach. These compounds with gradually increasing distance between the unsaturated moiety and the isonitrile group are studied by UV photoelectron spectroscopy and quantum chemical calculations, and also compared to the corresponding nitriles. The first photoelectron band of the unsaturated compounds is linked to removal of an electron from the HOMO, which corresponds to CC multiple-bond ionization in antibonding interaction with the π-isocyanide bond (in the same plane) for conjugated systems, or in antibonding interaction with the pseudo-π-CH(2) group for isolated systems. For the 1-ethenyl derivatives, both cyano and isocyano groups act as a π-electron acceptor from the vinyl group, but the isocyano π system is much more strongly destabilized (ionization energies (IEs) shift to smaller values) by vinyl (3.12 eV) than the cyano π system is (2.70 eV). In comparison with the 1-ethynyl derivatives, a less pronounced destabilization (2.69 eV) of π(NC) by the ethynyl system (1.86 eV for π(CN)), and nearly the same order of magnitude of the energetic gap between the total antibonding (π(CC)-π(NC)) and the total bonding (π(CC)+π(NC)) IEs for ethenyl and ethynyl compounds are noted. The huge values of these last-named data for H(2)C=CH-NC (3.85 eV) and for HC≡C-NC (4.04 eV) reflect the strong interaction between the unsaturated carbon-carbon moiety and the isocyanide group, and thus more efficient conjugation than for the corresponding nitriles.     

Theoretical Density Functional Theory insights into the nature of chalcogen bonding between CX2 (X = S,Se, Te) and diazine from monomer to supramolecular complexes

Chalcogen bonding is a noncovalent interaction, highly similar to halogen and hydrogen bonding, occurring between a chalcogen atom and a nucleophilic region. Two density functional theory (DFT) approaches B3LY-D3 and B97-D3 were performed on a series of complexes formed between CX₂ (X = S, Se, Te) and diazine (pyridazine, pyrimidine and pyrazine). Chalcogen atoms prefer interacting with the lone pair of a nitrogen atom rather than with the π-cloud of an aromatic ring. CTe₂ and CSe₂ form a stronger chalcogen bond than CS₂. The electrostatic potential of CX₂ (X = S, Se and Te) reveals the presence of two equivalent σ-holes, one on each chalcogen atom. These CX₂ molecules interact with diazine giving rise to supramolecular interactions. Wiberg bond index and second-order perturbation theory analysis in NBO were performed to better understand the nature of the chalcogen bond interaction.     

Coupling between Substituents as a Function of Cage Structure: Synthesis and Valence Ionized States of Bridgehead Disubstituted Parent and Hexafluorinated Bicyclo[1.1.1]pentane Derivatives C5X6Y2

He(I) photoelectron spectroscopy was used to examine the valence‐shell electronic structure of three new and seven previously known bicyclo[1.1.1]pentane derivatives, 1,3‐Y₂‐C₅X₆ (for X=H, Y=H, Cl, Br, I, CN; for X=F, Y=H, Br, I, CN). A larger series (X=H or F, Y=H, F, Cl, Br, I, At, CN) has been studied computationally with the SAC‐CI (symmetry‐adapted cluster configuration interaction) method. The outer‐valence ionization spectra calculated by the SAC‐CI method, including spin–orbit interaction, reproduced the experimental photoelectron spectra well, and quantitative assignments are given. When the extent of effective through‐cage interaction between the bridgehead halogen lone‐pair orbitals was defined in the usual way by orbital‐energy splitting, it was found to be larger than that mediated by other cages such as cubane, and was further enhanced by hexafluorination. The origin of the orbital‐energy splitting is analyzed in terms of cage structure, and it is pointed out that its relation to the degree of interaction between the bridgehead substituents is not as simple as is often assumed.     

Theoretical investigations on heteronuclear chalcogen-chalcogen interactions: on the nature of weak bonds between chalcogen centers

To understand the intermolecular interactions between chalcogen centers (O, S, Se, Te), quantum chemical calculations on model systems were carried out. These model systems were pairs of monomers of the composition (CH3)2X1 (X1 = O, S, Se, Te) as the donors and CH3X2Z (with X2 = O, S, Se, Te and Z = Me, CN) as the acceptors. The variation of X1, X2, and Z leads to 32 pairs with 8 homonuclear cases (X1 = X2 = O, S, Se, Te) and 24 heteronuclear cases (X1 not equal X2). The MP2/SDB-cc-pVTZ, 6-311G* level of theory was used to derive the geometrical parameters and the interaction energies of the model systems. The pairs with Z = CN (17-32) show a considerably higher interaction energy than the pairs with CH3 groups only (1-16). Natural bond orbital (NBO) analysis revealed that the interaction of the dimers 1, 2, 5, 6, 9, 10, 13, 14, 17, 21, 25, and 29 is mainly due to weak hydrogen bonding between methyl groups and chalcogen centers. These systems all contain hard chalcogen atoms as acceptors. For all other systems, the chalcogen-chalcogen interaction dominates. The one-electron picture of an interaction between the lone pair of the donor chalcogen atom and the chalcogen-carbon antibonding sigma* orbital serves as a model to qualitatively rationalize trends found in many of these systems. However, it has to be applied with some amount of skepticism. A detailed analysis based on symmetry-adapted perturbation theory (SAPT) reveals that induction and dispersion forces dominate and contribute to the bonding in each case. Hydrogen-bonded compounds involve bonding electrostatic contributions. Compounds dominated by chalcogen-chalcogen interactions exhibit bonding due to electrostatic interactions only if one of the chalcogen atoms involved is sulfur or oxygen.     

Secondary Bonding,C═H…O Hydrogen Bonding Assisted Supramolecular Associations and Charge Transfer (CT) Complexes of Organotelluriums and their Nonlinear Optical Properties

Abstract

A library of supramolecular assemblies of acyclic- and cyclic organotelluriums assisted by intermolecular Te… X (X = Cl, Br, I, O, S) secondary bonds has been synthesized and X-ray characterized. In each case the immediate coordination geometry around the central Te atom is pseudotrigonal bipyramidal in which two methylene carbon atoms (attached to Te) in cyclic organotelluriums and methyl carbon atoms in acyclic organotelluriums and the stereochemically active electron lone pair occupy equatorial positions whereas the axial positions are occupied by halogen, oxygen or sulphur. They exists either as (a) ordered oligomers (trimeric, tetrameric, octameric aggregates) (b) cross linked chains, (c) zig-zag ?2 dimensional ribbons and stairs, and (d) 3-dimensional supramolecular networks. It is observed that the supramolecular associations assisted by Te…O and Te…S secondary bonds are modified whereas those assisted by Te…halogen remain more or less the same vis-à-vis the supramolecular associations present in their precursors in the solid state. The first detection of C─H…O hydrogen bonds in organotellurium compounds has been done and their use in the synthesis of tellurium essential and ligand essential supramolecular assemblies is demonstrated. Tetraorganotelluroxanes obtained by easy and efficient routes represent the examples of cooperative participation of intermolecular and intramolecular Te…O secondary bonds and C─H…O hydrogen bonds. Hypervalent Te─I (formed through n → σ* orbital interactions) bonds in cyclic telluranes act as potential synthons for the formation of CT complexes possessing unusual structures. The utility of organotelluriums in the serendipitous synthesis of the first triphenyl methyl phosphonium salts of [C₄H₈TeI₄]^2? and [TeI₆]^2? anions is shown. The second harmonic generation (SHG) efficiency of some of these new supramolecular assemblies of organotelluriums indicates that the presence of C─H…O hydrogen bonds enhances their non linear optical (NLO) properties.     

Photoelectron spectra,penning ionization electron spectra,and character of canonical molecular orbitals

When canonical molecular orbitals are expanded in terms of a set of localized molecular orbital building blocks, called bond orbitals, the character of the canonical molecular orbitals can be characterized according to the component bond orbitals resembling the core, lone pair, and localized bond building blocks in an intuitive Lewis structure. Weinhold's natural bond orbital method can produce a unique Lewis structure with total occupancy of its occupied bond orbitals exceeding 99.9% of the total electron density for simple molecules. Two useful indices, Lewis bond order and weight of lone pair orbitals, can be defined according to the weights of the bonding and lone pair components of this unique Lewis structure. Calculation results for molecules N₂, CO, CS, NO, HCN, C₂H₂, H₂O, and H₂S show that the former index can account for the vibrational structures of photoelectron spectroscopy, whereas the latter index can account for the band intensity enhancement of Penning ionization electron spectroscopy. © 1998 John Wiley & Sons, Inc. J Comput Chem 19: 882–892, 1998