Conformational isomerization of <Emphasis Type="Italic">N</Emphasis>-(naphthalen-1-yl)-<Emphasis Type="Italic">N</Emphasis>-(phenyl(quinolin-3-yl)methyl)amide derivatives

A series of N-(naphthalen-1-yl)-N-(phenyl(quinolin-3-yl)methyl)amide derivatives were designed and synthesized as anti-Mycobacterium tuberculosis drugs. NMR spectra showed that two conformational isomers of these compounds exist in solution, which is not due to cis-trans isomerization of amide bond. We proposed that the spatial interactions between three large aromatic groups caused the conformational isomerization, which was supported by molecular modeling and X-ray diffraction.     

Halocyclization of 2-(2-{4-[allylamino(thioxo)methyl]piperazin-1-yl}ethyl)-1<Emphasis Type="Italic">H</Emphasis>-benzo[<Emphasis Type="Italic">de</Emphasis>]isoquinoline-1,3(2<Emphasis Type="Italic">H</Emphasis>)-dione

Cyclization of 2-(2-{4-[allylamino(thioxo)methyl]piperazin-1-yl}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione by the action of iodine, bromine, or sulfuryl chloride gave 2-(2-{4-[4,5-dihydro-5-(halomethyl)-thiazol-2-yl]piperazin-1-yl}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione hydrohalides which were converted into 2-{2-[4-(5-methylthiazol-2-yl)piperazin-1-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione.     

Rhenium(V) oxocomplexes incorporating 2-(2<Emphasis Type="Italic">H</Emphasis>-benzotriazol-2-yl)-4,6-di-<Emphasis Type="Italic">tert</Emphasis>-pentylphenolate ligand: X-ray studies,spectroscopic characterization and DFT calculations

Novel rhenium(V) oxocomplexes have been obtained in the reactions of [ReOX₃(EPh₃)₂] (X = Cl, Br; E = P, As) with 2-(2H-benzotriazol-2-yl)-4,6-di-tert-pentylphenol (HL). All the compounds were identified by elemental analysis IR, UV–Vis spectroscopy and X-ray crystallography. The electronic structure and spectroscopic features of [ReOBr₂(L)(PPh₃)] have been further investigated by means of the density functional theory (DFT) and time-dependent DFT methods. Additional information about binding in the title compounds has been obtained by NBO analysis.     

Complexes of cobalt(II) halides with 2-(1<Emphasis Type="Italic">H</Emphasis>-pyrazol-1-yl)-4(3<Emphasis Type="Italic">H</Emphasis>)-pyrimidinone

The electronic structures of complexes of cobalt(II) halides with 2-(1H-pyrazol-1-yl)-4(3H)-pyrimidinone have been studied by X-ray photoelectron spectroscopy. The Co2p _3/2 lines of cobalt atoms, N1s lines of nitrogen atoms, and O1s lines of oxygen atoms in the X-ray photoelectron spectra have been analyzed. Based on these data for the free and coordinated ligands, the atoms of the ligand coordinated to the central metal atom are determined. The coordinated organic compound serves as an electron-donating ligand. The results obtained are consistent with IR and UV-Vis spectroscopic data.     

Synthesis of 7-(furan-2-yl)-7,8,10,10a-tetrahydro-6<Emphasis Type="Italic">H</Emphasis>-benzo[<Emphasis Type="Italic">c</Emphasis>]-chromen-6,9(6a<Emphasis Type="Italic">H</Emphasis>)-diones

Methods of synthesis were developed for 7-(furan-2-yl)-substituted 7,8,10,10a-tetrahydrobenzo[c] chromen-6,9-diones by regioselective [4+2]-cycloaddition of coumarin-3-carboxylic acids to 2-(3-trimethylsiloxybuta- 1,3-dien-1-yl)furans. The [4+2]-cycloaddition was efficiently catalyzed with L-proline.     

Reactions of <Emphasis Type="Italic">N</Emphasis>-acetyl- and <Emphasis Type="Italic">N</Emphasis>-ethoxycarbonyl-2-(1-cycloalken-1-yl)anilines with <Emphasis Type="Italic">meta</Emphasis>-cloroperbenzoic acid

Reaction of N-ethoxycarbonyl-2-(1-cycloalken-1-yl)anilines with meta-cloroperbenzoic acid leads to the corresponding 2-[1-o-(3-chlorobenzoyl)-2-hydroxycyclopent-1-yl]anilines. 5-(2-Acetylaminophenyl)-5-oxopentanic or 6-oxohexanic acids are formed as main products in the reaction of N-acetyl-2-(1-cycloalken-1-yl)anilines with m-chloroperbenzoic acid in CH₂Cl₂. N-Acetyl-2-(1-cyclopenten-1-yl)-3,6-dimethylaniline is an exception in this series since its reaction stops at the stage of epoxide formation.     

Palladium complex of 6-(2-hydroxy-5-methylphenyl)-3-(pyridin-2-yl)-1,2,4-triazin-5(2<Emphasis Type="Italic">H</Emphasis>)-one: Synthesis,structure, and catalytic activity

Palladium(II) complex with 6-(2-hydroxy-5-methylphenyl)-3-(pyridin-2-yl)-1,2,4-triazin-5(2H)-one was synthesized for the first time. The ligand was prepared from 3-(pyridin-2-yl)-1,2,4-triazin-5(2H)-one and 4-methylphenol via nucleophilic substitution of hydrogen (S_N^H reaction). The complex was readily soluble in basic medium, and it effectively catalyzed Mizoroki-Heck reaction.     

3<Emphasis Type="Italic">H</Emphasis>-Benzo[<Emphasis Type="Italic">a</Emphasis>]imidazo[4,5-<Emphasis Type="Italic">j</Emphasis>]acridine as a new fluorescent heterocyclic system: synthesis,spectral studies,and quantum chemical investigation

The synthesis, spectral studies, and theoretical calculations of a new fluorescent heterocyclic system are described. New 3H-benzo[a]imidazo[4,5-j]acridines were obtained in high yields by the reaction of 1-alkyl-5-nitro-1H-benzimidazoles with (naphthalen-1-yl)acetonitrile via nucleophilic substitution of hydrogen, and their structures were established by spectral (UV-Vis, FT-IR, 1H and 13C NMR) and analytical data. Study of the optical and solvatochromic properties of the dyes revealed their high molar absorption coefficients and high fluorescence quantum yields which in some cases exceeded quantum yields of well-known fluorescent dyes such as fluorescein. Density functional theory (DFT) calculations using the B3LYP hybrid functional and 6-311++G(d,p) basis set were performed to obtain optimized geometries and frontier orbital structures of the synthesized compounds. The electronic absorption spectra were also simulated by the time-dependent density functional theory (TD-DFT) method.     

Cyclization of trifluoro-<Emphasis Type="Italic">N</Emphasis>-(prop-2-yn-1-yl)methanesulfonamides to <Emphasis Type="Italic">N</Emphasis>-(hydroxymethyl)-1,2,3-triazoles

Three-component heterocyclizations of trifluoro-N-(prop-2-yn-1-yl)methanesulfonamide, trifluoro-N-pheny-N-(prop-2-yn-1-yl)methanesulfonamide, and trifluoro-N,N-di(prop-2-yn-1-yl)methanesulfonamide with formaldehyde and sodium azide afforded N-{[2-(hydroxymethyl)-2H-1,2,3-triazol-4-yl]methyl}-, N-{[2-(hydroxymethyl)-2H-1,2,3-triazol-4-yl]methyl}-N-phenyl-, and N,N-bis{[2-(hydroxymethyl)-2H-1,2,3-triazol-4-yl]methyl}trifluoromethanesulfonamides as the major products together with minor 1-(hydroxymethyl)-1H-1,2,3-triazole isomers.     

Regioselective synthesis of polyfluoroalkyl-substituted 7-(1<Emphasis Type="Italic">H</Emphasis>-1,2,3-triazol-1-yl)-6,7-dihydro-1<Emphasis Type="Italic">H</Emphasis>-indazol-4(5<Emphasis Type="Italic">H</Emphasis>)-ones

3-Polyfluoroalkyl-6,6-dimethyl-7-(1H-1,2,3-triazol-1-yl)-6,7-dihydro-1H-indazol-4(5H)-ones were synthesized with high regioselectivity by 1,3-dipolar cycloaddition of terminal alkynes (phenylacetylene, hex- 1-yne, hept-1-yne, and but-3-yn-1-ol) to 7-azido-6,6-dimethyl-3-polyfluoroalkyl-6,7-dihydro-1H-indazol-4(5H)-ones which were prepared by bromination of 6,6-dimethyl-3-polyfluoroalkyl-6,7-dihydro-1H-indazol- 4(5H)-ones with N-bromosuccinimide in anhydrous carbon tetrachloride, followed by treatment of the corresponding 7-bromo derivatives with sodium azide.     

Oxidation of (1<Emphasis Type="Italic">S</Emphasis>,5<Emphasis Type="Italic">R</Emphasis>,7<Emphasis Type="Italic">R,S</Emphasis>)-(4,7-dimethyl-6-oxabicyclo[3.2.1]oct-3-en-7-yl) methanol with pyridinium chlorochromate

The oxidation of (1S,5R,7R,S)-(4,7-dimethyl-6-oxabicyclo[3.2.1]oct-3-en-7-yl)methanol epimeric at the C⁷ atom resulted in scalemic (5R)-5-acetyl-2-methylcyclohex-2-en-1-one.     

Synthesis of [5-(1<Emphasis Type="Italic">H</Emphasis>-1,2,3-triazol-4-yl)-1,3,4-oxadiazol-2-yl]pyridines

2-, 3-, and 4-[5-(1-Aryl-5-R-1H-1,2,3-triazol-4-yl)-1,3,4-oxadiazol-2-yl]pyridines were synthesized from the corresponding 1-aryl-5-R-1H-1,2,3-triazole-4-carbonyl chlorides and 2-, 3-, and 4-(1H-tetrazol-5-yl)-pyridines.     

Synthesis of the (2<Emphasis Type="Italic">S</Emphasis>,4<Emphasis Type="Italic">S</Emphasis>)-stereoisomers of 4-(indol-1-yl) and 4-arylamino derivatives of 5-oxoproline,proline, and 2-hydroxymethylpyrrolidine

Nucleophilic substitution of the halogen atom in dimethyl (S)-4-bromoglutamate followed by removal of the protecting groups and closure of a lactam ring afforded (2S,4S)-4-(indolin-1-yl)-5-oxoproline. The indoline fragment was oxidized into the indole fragment to give (2S,4S)-4-(indol-1-yl)-5-oxoproline; reduction of the carbonyl groups with BH3 yielded (2S,4S)-4-(indol-1-yl)prolines and (2S,4S)-2-hydroxymethyl-4-(indol-1-yl)pyrrolidines. Reduction of (2S,4S)-4-arylamino-5-oxoprolines with BH3 to the corresponding (2S,4S)-4-arylaminoprolines and (2S,4S)-4-arylamino-2-hydroxymethylpyrrolidines was studied.     

Photochromism of an <Emphasis Type="Italic">N</Emphasis>-aminofulgimide-derived Schiff base

A Schiff base was synthesized from 5-methoxysalicylaldehyde and N-aminofulgimide, viz., 1-amino-3-[1-(2,5-dimethylthiophen-3-yl)ethylidene]-4-isopropylidenepyrrolidine-2,5-dione. The compound synthesized undergoes photochromic transformations typical of those of N-aminofulgimide studied earlier. A bathochromic shift of the absorption bands of the open and cyclic forms of the obtained Schiff base compared to the starting N-aminofulgimide was observed.     

<Emphasis Type="Italic">Z</Emphasis>-and <Emphasis Type="Italic">E</Emphasis>-conformers of <Emphasis Type="Italic">N</Emphasis>-chloroacetylcytisine

N-Chloroacetylcytisine was synthesized by acylation of (–)-cytisine. Stable Z- and E-conformers with respect to rotational isomerism around the N-12–CO bond were found in PMR spectra at room temperature. The point at which PMR resonances of the Z- and E-conformers coalesced upon heating was measured. The transition barrier between the conformers was estimated.     

Crystallographic study and molecular modeling on the oxidation product of <Emphasis Type="Italic">N</Emphasis>-[(8<Emphasis Type="Italic">R</Emphasis>)-2-methoxy-5,6,7,8,9,10-hexahydro-6,9-methanocyclohepta[<Emphasis Type="Italic">b</Emphasis>]indol-8-yl]acetamide

Crystallization of N-[(8R)-2-methoxy-5,6,7,8,9,10-hexahydro-6,9-methanocyclohepta[b]indol-8-yl]acetamide was accompanied by oxidation at the C^5a–C^10a bond with formation of N-[(5S)-10-methoxy-2,8-dioxo-1,2,3,4,5,6,7,8-octahydro-3,6-methano-1-benzazecin-5-yl]acetamide whose structure was determined by X-ray analysis. Docking of this compound into melatonin-binding pocket of MT_1A receptor was simulated by computer-assisted molecular modeling.     

Quantum-chemical study of the structure and magnetic properties of mono- and binuclear Cu(II) complexes with 1,3-bis(3-(pyrimidin-2-yl)-1<Emphasis Type="Italic">H</Emphasis>-1,2,4-triazol-5-yl)propane

On the basis of X-ray crystallographic data on molecular copper complexes with 1,3-bis(3-(pyrimidin-2-yl)-1H-1,2,4-triazol-5-yl)propane, quantum-chemical optimization of their equilibrium structure has been performed by the density functional theory method with subsequent analysis of the electron density distribution by Bader’s atoms in molecules method and g-factor anisotropy calculation. The topological parameters of electron density at the Cu–N bond critical points have been considered, and the bond energies have been estimated using the Espinosa equation. A phenomenon of variable coordination of nitrate ions with Cu(II) ions in the inner coordination sphere of the mononuclear copper complex with 1,3-bis(3-(pyrimidin-2-yl)-1H-1,2,4-triazol-5-yl)propane has been revealed. The contributions of different components to the gfactor anisotropy have been analyzed in the framework of the gauge-independent atomic orbital method. The largest contribution to the g-factor is made by the orbital (Zeeman) and spin–orbit components accounting for very high averaged g-factor values of 2.1413 and 2.5636 for the doublet state of the mononuclear complex and the triplet state of the binuclear complex, respectively.     

Microwave assisted synthesis of substituted (<Emphasis Type="Italic">Z</Emphasis>)-2-{[1-phenyl-3-(thiophen-2-yl)-1<Emphasis Type="Italic">H</Emphasis>-pyrazol- 4-yl]methylene}benzofuran-3(2<Emphasis Type="Italic">H</Emphasis>)-ones and their antimicrobial activity

Aurones, pyrazole and thiophene scaffolds are known for their potential antimicrobial activity. Herein, we have synthesized hybrid compounds containing three substituted (Z)-2-{[1-phenyl-3-(thiophen-2-yl)- 1H-pyrazol-4-yl]methylene}benzofuran-3(2H)-ones that had been produced from substituted (E)-1-(2-hydroxyphenyl)- 3-[1-phenyl-3-(thiophen-2-yl)-1H-pyrazol-4-yl]prop-2-en-1-ones in high yields. All synthesized compounds were tested in vitro for their antimicrobial activity. Several of those demonstrated promising activity against some fungal and bacterial strains.     

Quantum chemical calculations for the geometry and intramolecular rearrangements of a model nickel(<Emphasis Type="SmallCaps">ii</Emphasis>) <Emphasis Type="Italic">o</Emphasis>-semiquinone complex with a PCP pincer ligand

The structure and intramolecular rearrangements of the model five-coordinate nickel PCP-pincer complex with the o-semiquinone ligand were studied by the density functional theory method at the B3LYP/6-311++G(d,p) level. The isomerization associated with swing vibrations of the o-semiquinone ligand can occur virtually barrierless (0.7 kcal mol⁻¹). The dynamics of the coordination sphere determined by pendulum vibrations of the o-semiquinone ligand has the energy barriers of 4–5 kcal mol⁻¹, which is in good agreement with experimental data. A comparison of the results of calculations with the ESR spectroscopic data revealed the dependence of the types and the energy characteristics of intramolecular rearrangements on the nature of substituents at the phosphorus atom.     

Theoretical Study and Experimental Analysis on 2-(1-Ethyl-4-hydroxy-2-oxo-1,2-dihydroquinolin-3-yl)-2-oxoacetic Acid (<Emphasis Type="Bold">3</Emphasis>) Using the DFT Approach

Riley oxidation of 3-acetyl-4-hydroxyquinolin-2(1H)-one (1) with selenium dioxide furnished the unexpected product 2-(1-ethyl-4-hydroxy-2-oxo-1,2-dihydroquinolin-3-yl)-2-oxoacetic acid (3). The expected product 2-(1-ethyl-4-hydroxy-2-oxo-1,2-dihydroquinolin-3-yl)-2-oxoacetaldehyde (2) was excluded based on the spectral data. The elemental analysis and spectral data (IR, and ¹H NMR) was used to deduce the structure of compound 3. Density functional theory (DFT) and time-dependent density functional theory (TD-DFT) calculations of the electronic structure at the B3LYP/6-311G (d,p) level of theory have been employed for compound 3 to investigated its geometry, linear polarizability 〈Δα〉, first-order hyperpolarizability 〈β〉, natural bonding orbital (NBO), molecular electrostatic potential contours (MEP and ESP), electrophilicity, and UV–Vis spectra in both ethanol and dioxane solvents. The geometrical and energetic parameters have been extensively investigated to reveal the reason behind the selective formation of compound 3, rather than the expected product 2. FT-IR spectra in the solid phase were recorded for compound 3. The thermo-chemical parameters, harmonic vibration frequencies, and the equilibrium geometries have been calculated at the DFT/B3LYP/6-311G (d,p) level. Time-dependent density functional theory (TD-DFT) was used to calculate the excited states of compound 3. Changes in the solvent cause changes in the band intensities and in the positions of the band maxima (λ_max). The excited state was identified and contributes to the electronic configurations, and it was characterized in terms of the relevant MOs. The theoretical spectra were computed using the Coulomb-attenuating method (CAM-B3LYP), using the basis set 6-311G (d,p) in the gas phase, and the polarizable continuum model (PCM) in dioxane and ethanol. The results indicate good agreement with the observed spectra.