Electron transfer dynamics of cytochrome c bound to self-assembled monolayers on silver electrodes.

Cytochrome c (Cyt-c) was electrostatically immobilised on Ag electrodes coated with self-assembled monolayers (SAM) that are formed by omega-carboxyl alkanethiols with different alkyl chain lengths (C(x)). Surface enhanced resonance Raman (SERR) spectroscopy demonstrated that electrostatic binding does not lead to conformational changes of the heme protein under the conditions of the present experiments. Employing time-resolved SERR spectroscopy, the rate constants of the heterogeneous electron transfer (ET) between the adsorbed Cyt-c and the Ag electrode were determined for a driving force of zero electronvolts. For SAMs with long alkyl chains (C(16), C(11)), the rate constants display a normal exponential distance dependence, whereas for shorter chain lengths (C(6), C(3), C(3)), the ET rate constant approaches a constant value (ca. 130 s(-1)). The onset of the non-exponential distance-dependence is paralleled by an increasing kinetic H/D effect, indicating a coupling of the redox reaction with proton transfer (PT) steps. This unusual kinetic behaviour is attributed to the effect of the electric field at the Ag/SAM interface that increasingly raises the energy barrier for the PT processes with decreasing distance of the adsorbed Cyt-c from the electrode. The distance-dependence of the electric field strength is estimated on the basis of a simple electrostatic model that can consistently describe the redox potential shifts of Cyt-c as determined by stationary SERR spectroscopy for the various SAMs. At low electric fields, PT is sufficiently fast so that rate constants, determined as a function of the driving force, yield the reorganisation energy (0.217 electronvolts) of the heterogeneous ET.     

Electron transfer between cytochrome c and copper enzymes

The electron transfer between cytochrome c and ascorbate oxidase or laccase from Coriolus hirsutus was investigated using both an electrochemical and a spectrophotometric method. A quasi-reversible cyclic volammogram of cytochrome c was observed on a gold electrode modified with 4,4′-dithiodipyridine. The addition of laccase resulted in the appearance of a catalytic current due to the regeneration of ferricytochrome c by laccase in the presence of oxygen. The second-order rate constant of the reaction between cytochrome c and laccase is calculated to be 9.2 × 10³ M⁻¹ s⁻¹ in 50 mM phosphate buffer of pH 5.8. The reaction rate with ascorbate oxidase is almost three orders of magnitude slower. The difference in the redox potential is considered to be the driving force of the reaction between cytochrome c and the copper proteins investigated.     

Electron transfer reactions of cytochrome c at metal electrodes

The heterogeneous electron transfer reactions of cytochromec occurring at platinum, gold and mercury electrodes are shown to be quasi-reversible. In each case the electrodes have not been modified and the cytochromec samples are native. This work extends previous work and demonstrates that biological molecule electron transfer reactions can be studied at clean metal surfaces to gain fundamental knowledge of the mechanisms of these reactions.     

Electron transfer between cytochrome c and cytochome c peroxidase in single crystals

Cytochrome c (Cc) and cytochrome c peroxidase (CcP) form an important redox pair for understanding interprotein electron transfer (ET). Measurements of ET rates from photoexcited CcP substituted with Zn porphyrin to either yeast Fe(III)Cc or horse Fe(III)Cc in crystals reveal that the molecular associations found in the respective crystal structures determine solution reactivity. Similar forward rates for yeast isozyme-1 Cc (yCc) and yCc homologue horse Cc (hCc), despite different orientations relative to CcP, suggest small-amplitude conformational gating of ET even in the crystalline state; faster back ET in the yCc compared to the hCc complex agrees with the relative coupling between redox sites predicted by the structures.     

Electron transfer between cytochrome c and metalloporphyrins at high exothermicities

The electron-transfer rates between cytochrome c and the anion radical of two metalloporphyrins ZnTPPS and ZnTPPC (ΔE for the reaction is 1.42eV) have been measured by laser flash spectroscopy. The anion radicals were produced by reaction of the porphyrins with hydrated electrons which resulted from the photoionization of ferrocyanide ions. Together with results obtained previously, a reorganization energy of ≈ 1.1 eV was deduced for the cytochrome c-porphyrin system.     

Electron transfer and electrocatalytic properties of the immobilized methionine80alanine cytochrome c variant

The M80A variant of yeast iso-1-cytochrome c (cytc), which features a noncoordinating Ala residue in place of the axial heme iron Met ligand, was chemisorbed on a gold electrode coated with 4-mercaptopyridine or carboxyalkanethiol self-assembled monolayers (SAM) and investigated by cyclic voltammetry at varying conditions of temperature, pH, and O2 concentration. The E degrees ' value (standard reduction potential for the heme Fe(III)/Fe(II) couple) of M80A cytc on both SAMs is of approximately -200 mV (vs the standard hydrogen electrode, SHE) at pH 7, which is more than 400 mV lower than that of native cytochrome c in the same conditions. The thermodynamics of Fe(III) to Fe(II) reduction and the kinetics of heterogeneous electron transfer (ET) are dominated by the presence of a hydroxide ion as the sixth axial heme iron ligand above pH 6. On both SAMs, protonation of the bound hydroxide ion is mainly responsible for the changes in these parameters at low pH, since the distances of ET between the heme and the electrode are found to be independent of pH in the range of 5-11. The invariance of the electrochemical features up to pH 11 indicates that no changes in heme iron coordination occur at high pH, at variance with native cytc. Most notably, immobilized M80A cytc is found to act as an efficient biocatalyst for O2 reduction from pH 5 to 11.0. This finding makes M80A cytc a suitable candidate as a constituent of a biocatalytic interface for O2 biosensing and opens the way for the exploitation of engineered cytochrome c in the bio-based detection of chemicals of environmental and clinical interest.     

Proton-coupled electron transfer of cytochrome c.

Cytochrome c (Cyt-c) was electrostatically bound to self-assembled monolayers (SAM) on an Ag electrode, which are formed by omega-carboxyl alkanethiols of different chain lengths (C(x)). The dynamics of the electron-transfer (ET) reaction of the adsorbed heme protein, initiated by a rapid potential jump to the redox potential, was monitored by time-resolved surface enhanced resonance Raman (SERR) spectroscopy. Under conditions of the present experiments, only the reduced and oxidized forms of the native protein state contribute to the SERR spectra. Thus, the data obtained from the spectra were described by a one-step relaxation process yielding the rate constants of the ET between the adsorbed Cyt-c and the electrode for a driving force of zero electronvolts. For C(16)- and C(11)-SAMs, the respective rate constants of 0.073 and 43 s(-1) correspond to an exponential distance dependence of the ET (beta = 1.28 A(-1)), very similar to that observed for long-range intramolecular ET of redox proteins. Upon further decreasing the chain length, the rate constant only slightly increases to 134 s(-1) at C(6)- and remains essentially unchanged at C(3)- and C(2)-SAMs. The onset of the nonexponential distance dependence is paralleled by a kinetic H/D effect that increases from 1.2 at C(6)- to 4.0 at C(2)-coatings, indicating a coupling of the redox reaction with proton-transfer (PT) steps. These PT processes are attributed to the rearrangement of the hydrogen-bonding network of the protein associated with the transition between the oxidized and reduced state of Cyt-c. Since this unusual kinetic behavior has not been observed for electron-transferring proteins in solution, it is concluded that at the Ag/SAM interface the energy barrier for the PT processes of the adsorbed Cyt-c is raised by the electric field. This effect increases upon reducing the distance to the electrode, until nuclear tunneling becomes the rate-limiting step of the redox process. The electric field dependence of the proton-coupled ET may represent a possible mechanism for controlling biological redox reactions via changes of the transmembrane potential.     

Ab initio molecular dynamics of heme in cytochrome c

Ab initio molecular dynamics (AIMD) calculations, based on the Car-Parrinello method, have been carried out for three models of heme c that is present in cytochrome c. Both the reduced (Fe(II)) and oxidized (Fe(III)) forms have been analyzed. The simplest models (1R and 1O, respectively) consist of a unsubstituted porphyrin (with no side chains) and two axially coordinated imidazole and ethylmethylthioether ligands. Density functional theory optimizations of these models confirm the basic electronic features and are the starting point for building more complex derivatives. AIMD simulations were performed after reaching the thermal stability at T = 300 K. The evolution of the Fe-L(ax) bond strengths is examined together with the relative rotations of the imidazole and methionine about the axial vector, which appear rather independent from each other. The next models (2R and 2O) contain side chains at the heme to better simulate the actual active site. It is observed that two adjacent propionate groups induce some important effects. The axial Fe-Sdelta bond is only weakened in 2R but is definitely cleaved in the oxidized species 2O. Also the mobility of the Im ligand seems to be reduced by the formation of a strong hydrogen bond that involves the Im Ndelta1-Hdelta1 bond and one carboxylate group. In 2O the interaction becomes so strong that a proton transfer occurs and the propionic acid is formed. Finally, the models 3 include a free N-methyl-acetamide molecule to mimic a portion of the protein backbone. This influences the orientation of carboxylate groups and limits the amount of their hydrogen bonding with the Im ligand. Residual electrostatic interactions are maintained, which are still able to modulate the dissociation of the methionine from the heme.     

Immobilization and electrochemistry of cytochrome c on amino-functionalized mesoporous silica thin films

The immobilization and electrochemistry of cytochrome c (cyt c) on amino-functionalized mesoporous silica thin films are described. The functionalized silica films with an Im3m cubic phase structure were deposited on conducting ITO substrate by co-condensation of tetraethoxysilane (TEOS) and 3-aminopropyltriethoxysilane (APTES) in the presence of Pluronic F127 under acidic conditions. The high specific surface area, large pore size and functional inner surface of mesoporous silica thin films result in a high cyt c loading, and the cyt c immobilization on this silicate framework is stable. After adsorption of cyt c, the ordered cubic structure of mesoporous silica and the redox activity of immobilized cyt c are retained as demonstrated by X-ray diffraction (XRD), Transmission electron microscope (TEM) and cyclic voltammetry. The redox behavior of the cyt c/silica film-modified ITO electrode is a surface-controlled quasi-reversible process for the experimental conditions used in this work and the electron transfer rate constant is calculated is 1.33 s⁻¹. The ITO electrode modified by cyt c/silica film possesses a high stability; even cyt c retains its redox activity following immobilization for several months. Furthermore, the electrocatalytic activities of the modified ITO electrode to hydrogen peroxide and ascorbic acid have been studied. Since these behaviors are quite pronounced, the modified electrode can be used for detection of hydrogen peroxide and ascorbic acid.     

Electron transfer and ligand binding to cytochrome c' immobilized on self-assembled monolayers

We have successfully immobilized Allochromatium vinosum cytochrome c' on carboxylic acid-terminated thiol monolayers on gold and have investigated its electron-transfer and ligand binding properties. Immobilization could only be achieved for pH's ranging from 3.5 to 5.5, reflecting the fact that the protein is only sufficiently positively charged below pH 5.5 (pI = 4.9). Upon immobilization, the protein retains a near-native conformation, as is suggested by the observed potential of 85 mV vs SHE for the heme FeIII/FeII transition, which is close to the value of 60 mV reported in solution. The electron-transfer rate to the immobilized protein depends on the length of the thiol spacer, displaying distance-dependent electron tunneling for long thiols and distance-independent protein reorganization for short thiols. The unique CO-induced dimer-to-monomer transition observed for cytochrome c' in solution also seems to occur for immobilized cytochrome c'. Upon saturation with CO, a new anodic peak corresponding to the oxidation of an FeII-CO adduct is observed. CO binding is accompanied by a significant decrease in protein coverage, which could be due to weaker electrostatic interactions between the self-assembled monolayer and cytochrome c' in its monomeric form as compared to those in its dimeric form. The observed CO binding rate of 24 M-1 s-1 is slightly slower than the binding rate in solution (48 M-1 s-1), which could be due to electrostatic protein-electrode interactions or could be the result of protein crowding on the surface. This study shows that the use of carboxyl acid-terminated thiol monolayers as a protein friendly method to immobilize redox proteins on gold electrodes is not restricted to cytochrome c, but can also be used for other proteins such as cytochrome c'.     

Electron transfer photofragmentations of 3-phenylpropiophenones

Summary Photolysis of 3-phenylpropiophenones1 a–d in the presence of 2,4,6-triphenylpyrylium tetrafluoroborate (TPT) yields the corresponding ,-unsaturated ketones2 a–c and1 d (from1 c), together with acetophenone (3), benzophenone (4), benzoic acid (5) and benzaldehyde (6), presumably by fragmentations of the radical cation1 ^{+ ·}, generated via a single electron transfer process from1 to the excitedTPT.

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Photofragmentierung von 3-Phenylpropiophenonen via Elektronenübertragung

Zusammenfassung Photolyse der 3-Phenylpropiophenone1 a–d in Gegenwart von 2,4,6-Triphenyl-pyrylium-tetrafluoroborat (TPT) ergeben die entsprechenden ,-ungesättigten Ketone2 a–c und1 d (aus1 c), neben Acetophenon (3), Benzophenon (4), Benzoesäure (5) und Benzaldehyd (6), vermutlich durch Fragmentierung des Radikal-Kations1 ^{+ ·}, das mittels Übertragung eines Elektrons von1 zuTPT im angeregten Zustand erzeugt wird.

     

Effect of deuterium substitution on electron transfer at cytochrome c/SAM interfaces

The involvement of protons in the heterogeneous electron transfer between cytochrome c and a gold electrode to which it is attached was studied by comparing the electron transfer rate constants for H2O and D2O solutions. Rate constants were measured as a function of the electrochemical cell solution and the protein incubant solution, i.e., k (0)(incubant, cell). Two separate isotope effects exist: a cell "isotope effect", KIE cell = k (0)(H2O, H2O): k (0)(H2O, D2O), which is manifest at short time scales (<30 s) and arises from the viscosity difference between H2O and D2O, and an incubant isotope effect, KIE inc= k (0)(H2O, H2O): k (0)(D2O, H2O), which is manifest at longer times (>2 h) and results from H/D exchange. The two isotope effects are approximately equal ( approximately 1.2) and a total isotope effect KIE total = k (0)(H2O, H2O): k (0)(D2O, D2O) can be constructed that is the product of KIE cell and KIE inc. The nature of the electron transfer process, possible coupling to a proton transfer process, and the involvement of specific hydrogens in the transfer mechanism are discussed.     

Electron injection dynamics of Ru polypyridyl complexes on SnO2 nanocrystalline thin films

Ultrafast infrared spectroscopy was utilized to investigate the electron-transfer dynamics from Ru(dcbpy)(2)(X)(2) complexes (dcbpy = 4,4'-dicarboxy-2,2'-bipyridine; X(2) = SCN(-), 2CN(-), and dcbpy; referenced as RuN3, Ru505, and Ru470, respectively) to nanocrystalline SnO(2) films. For both films exposed to air (dry) and submerged in a pH 2 buffer solution, all traces show biphasic dynamics with a small ultrafast component (less than 10%) and nonexponential slow component, indicating that most injection occurs from thermalized excited state of the dye. In the dry film, the injection rate becomes slower, comparing RuN3, Ru505, and Ru470, correlating with decreasing excited-state oxidation potentials in these dyes. However, the variation of injection rate with dye potential is less noticeable at pH 2. The possible reason for the different injection dynamics in these dyes and under different environments are discussed. These injection dynamics are also compared with those on TiO(2) and ZnO.     

Unfolding dynamics of cytochrome c revealed by single-molecule and ensemble-averaged spectroscopy

Denaturant-induced conformational change of yeast iso-1-cytochrome c (Cytc) has been comprehensively investigated in the single-molecule and bulk phases. By fluorescence-quenching experiments with dye-labelled heme-protein (Alexa 488-labelled Cytc, Cytc-A488), we clearly show that the fluorescence quenching observed from folded Cytc-A488 is due mainly to photoinduced electron transfer (PET) between electron-donating amino acids such as tryptophan and the dye attached to the protein. In addition, the unfolding process of Cytc-A488 observed in the single-molecule and bulk phases can be explained well in terms of a three-state model: Cytc unfolds through an intermediate with a native-like compactness. By quantitative analysis of fluorescence correlation spectroscopy (FCS) data, we were able to observe a relaxation time of ～1.5 μs corresponding to segmental motion and fast folding dynamics of 55 μs in the unfolded state of Cytc. The results presented here also suggest that a combination of single-molecule and ensemble-averaged spectroscopy is necessary to provide convincing and comprehensive assignments of protein kinetics.     

Photochemical growth of silver nanoparticles on c(-) and c(+) domains on lead zirconate titanate thin films

The photochemical growth of silver nanoparticles on the negative domains of lead zirconate titanate thin films is reported. A sample of highly [100] orientated lead zirconate titanate, with a ratio of 30:70, that was 65-70 nm thick grown on Pt-coated MgO was poled by use of piezoresponse force microscopy to produce defined regions of surface positive and negative polarization. A comparison between the growth of silver nanoparticles on the surface of the lead zirconate titanate when illuminated with two sources of super band gap UV is given. In both cases the wavelength of illumination leads to growth on the positive domains but only illumination with a Honle H lamp, with a high photon output over 250-200 nm, caused significant growth of silver nanoparticles on the negative domain. The deposition on the negative domain is explained in terms of changed band bending due to the excitation of electrons into the conduction band, the rate of decay to the ground state, and dimensions of the ferroelectric film. The rate of deposition of silver nanoparticles on the negative domains is approximately half that on the positive domains.     

Electron transfer and photoluminescence dynamics of CdS particles deposited on porous vycor glass

The red emission of CdS particles deposited on porous vycor glass can be effectively quenched by various electron acceptors in water. Luminescence decay measurements revealed that the quenching was static for any type of acceptor. These results can be well explained by the self-activated center model in which the emission center is a Cd vacancy associated with a halogen atom. In this model, any decrease in the initial intensity of the luminescence decay directly reflects the electron-transfer rate between CdS and the acceptor.     

Reversible immobilization and direct electron transfer of cytochrome c on a pH-sensitive polymer interface

A pH-sensitive polymer interface has been used as a matrix for reversible immobilization of cytochrome c (Cyt c) on an Au surface through a dip-coating process. The pH-sensitive behavior of the polymer brush interface has been demonstrated by cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS) measurements. The reversible immobilization and electron-transfer properties of Cyt c have been investigated by in situ UV/Vis spectrophotometry and CV. The results have shown that the poly(acrylic acid) (PAA) brush acted as an excellent adsorption matrix and a good accelerant for the direct electron transfer of Cyt c, which gave redox peaks with a formal potential of 40 mV versus Ag/AgCl in pH 7.6 phosphate buffer solution. The average surface coverage of Cyt c on the PAA film was about 1.7 x 10(-10) mol cm(-2), indicating a multilayer of Cyt c. The electron-transfer rate constant was calculated to be around 0.19 s(-1) according to the CV experiments. The interface was subjected to in situ attenuated total internal reflection Fourier-transform infrared (ATR-FTIR) spectroscopic analysis, in order to further confirm the immobilization of Cyt c on the surface. This polymer-protein system may have potential applications in the design of biosensors, protein separation, interfacial engineering, biomimetics, and so on.     

Active site structure and redox processes of cytochrome c oxidase immobilised in a novel biomimetic lipid membrane on an electrode

Membrane-bound cytochrome c oxidase was attached to an electrode via a His-tag linker and studied by surface enhanced resonance Raman spectroscopy, demonstrating intact redox site structures and electron transfer between the electrode and the immobilized enzyme.