X-ray emission study of the electronic structure of binuclear niobium complexes with (S<Subscript>2</Subscript>)<Superscript>2</Superscript>–disulfide bridging ligands

The electronic structure of binuclear niobium complexes [Nb₂S₄(acac)₄] and K₄[Nb₂S₄(ox)4] is studied by X-ray emission fluorescent spectroscopy and quantum chemistry techniques. Data on the partial atomic composition of highest occupied molecular orbitals of the complexes are obtained. The energy positions of bonding and antibonding frontier molecular orbitals observed in the X-ray emission spectra of binuclear [Nb₂((S₂)^2–)₂]⁴⁺ clusters are determined by the analysis of overlap populations.     

Iron(II) and ruthenium(II) complexes with polypyridine derivatives as sensitizers for DSSC: the structure and spectral properties,as studied by quantum chemistry methods

Density functional calculations of the geometries, electronic structures, and spectral properties of a series of iron(II) and ruthenium(II) complexes with 4,4´,4´,4´´-substituted 2,2´:6´2´´:6´´,2´´´-quaterpyridines were carried out. A high-spin state is characteristic of the iron(II) complexes with Cl^–, NO^–, CNS^–, and I^– as axial ligands while a low-spin state is characteristic of the iron(II) complex with a CN^– axial ligand. Calculations of the complexes with the nitroxide ligand predict intense absorption in a wide wavelength range up to the IR region.     

Electronic structure of testosterone: A semiempirical and ab initio assessment

Testosterone (17β-hydroxy-4-androsten-3-one) was studied by the semiempirical AM1 and PM3 and ab initio STO-3G^*, 3–21G^*, and 6–31G^* methods. The goals were to compare those methods and to know the electronic structure of the hormone. Full geometry optimization was performed, and two crystal conformers (T1 and T2), and experimental dipole moment in solution were used for comparison. One conformer with a dipole moment similar to the solvated conditions was generated. Total energy, entalphies, dipole moments, charges, electrostatic potentials, and highest occupied molecular orbitals (HOMO) and lowest unoccupied molecular orbital (LUMO) were calculated. Root-mean-square (RMS) index of the theoretical molecules against T1 and T2 showed best results with the 3–21G^* and 6–31G^* methods, while AM1 gave better energies than PM3. Dipole moments were directed toward the OH group and the botton face of the A ring. The frontier orbitals were located along the C4–C5 π bond, particularly the LUMO was split between C4 and C5, predicting the action of enzymes at C5 yielding to 5α and 5β-reduced androgens. Electrostatic potentials might be also of biological importance since they are coincidental with the dipole-moment orientation. Finally, it is interesting that the solvatedlike conformer, its properties, and the OH group laid between the same group of T1 and T2 and with a total energy between the crystals and the gas phase or in vacuo conditions. This results might also explain the biology of testosterone and use them to model the hormone-receptor interaction. © 1997 John Wiley & Sons, Inc.     

Ab initio assessment of the electronic structure of 5α-reduced progestins

Progesterone (P) yields to 5α-reduced progestins, namely 5α-pregnanedione (DHP), tetrahydroprogesterone (THP), and allopregnanolone (ALLO-P). The geometries and electronic structure of these steroids were assessed by ab initio calculations using the 6-31G* basis set. The parameters measured were bond distances, valence angles, and dihedral angles. Likewise, the following were calculated: total energy; frontier orbitals, i.e., highest occupied molecular orbital (HOMO); lowest unoccupied molecular orbital (LUMO); dipole moment; atomic charges; and electrostatic potentials. The frontier orbitals of P were located at the π-double bond. However, the HOMO of the 5α-progestins was extended into the molecule, while the LUMO was confined at the C20 carbonyl group. The atomic charges, electronic density surfaces and electrostatic potentials showed patterns according to the stereochemical arrangement of the C3 and C20 carbonyl and hydroxyl functional groups. Interestingly, P and THP showed the larger dipole moment and high electronic density at the A-ring because the double bond and the 3α-hydroxy group, respectively. The present results might explain to some extent the metabolism of the studied progestins. Similarly, some physicochemical properties, such as dipole moments and electrostatic potentials, seem related with important biological actions such as uterine contractility and control of gonadotropin secretion. © 1998 John Wiley & Sons, Inc. Int J Quant Chem 67: 329–338, 1998     

Experimental and DFT studies of ethyl N′-3-(1H-imidazol-1-yl) propylcarbamoyl benzohydrazonate monohydrate

The Imidazole compound, Ethyl N′-3-(1H-imidazol-1-yl) propylcarbamoyl benzohydrazonate monohydrate, has been synthesized and characterized by IR, NMR, electronic spectroscopy, and X-ray single-crystal determination. Molecular geometry from X-ray experiment of the title compound in the ground state has been compared using the density functional method (B3LYP) with 6-31G+(d) basis set. To determine conformational flexibility, molecular energy profile of the title compound was obtained by DFT calculations with respect to two selected degrees of torsional freedom, which were varied from −180° to +180° in steps of 10°. Besides, molecular electrostatic potential (MEP), natural bond orbitals (NBO), frontier molecular orbitals (FMO), and thermodynamic properties were performed at B3LYP/6-31G+(d) level of theory.     

Substituent Effect on the Electronic Properties and Nature of the W≡C Bond in trans‐Cl(OC)(H3P)3W(≡C‐para‐C6H4X) (X = H,F, SiH3, CN,NO2, SiMe3, CMe3, NH2, NMe2) Complexes: A Computational Quantum Chemistry Study

In this investigation, we describe substituent effect on the dipole moment, ionization potential, electron affinity, structure, frontier orbitals energy, in the trans‐Cl(OC)(H₃P)₃W(≡C‐para‐C₆H₄X) (X = H, F, SiH₃, CN, NO₂, SiMe₃, CMe₃, NH₂, NMe₂) complexes using MPW1PW91 quantum chemical calculations. The nature of chemical bond between the [Cl(OC)(H₃P)₃W]⁻ and [C‐para‐C₆H₄X]⁺ fragments was illustrated with energy decomposition analysis (EDA). Percentage composition in terms of the defined groups of frontier orbitals for these complexes was inspected to investigate the character in metal–ligand bonds. Quantum theory of atoms in molecules (QTAIM) was used for illustration of metal–ligand bonds in these complexes.     

Frontier orbitals and ligand-to-metal charge transfer electronic transitions in <Emphasis Type="Italic">d</Emphasis><Superscript>0</Superscript>-metal complexes

Properties of frontier orbitals and low-energy electronic transitions in a d ⁰-organometallic complex have been studied by TDDFT and DFT methods using B3LYP hybrid functional and 3-21G*, 6-31G**, SDD, CEP-121G, and DGDZVP basis sets. It has been shown that the electronic transition between frontier orbitals in the excitation and absorption spectra is associated with charge transfer mainly from π-type ligands to a central metal d ⁰-ion. The good agreement of the data (the shape and band position of the spectra of electronic absorption and excitation, energy of electronic transitions, and strength of the harmonic oscillator) of quantum-chemical and photophysical studies is demonstrated.     

The Analysis of Os≡C Bond and Electric Field Influence on the Properties in the Osmium Carbyne Complex OsCl3 (≡CCH2CMe3 )(PH3 )2: A Theoretical Insight

In this paper, we study the effect of electric field on the dipole moment, electronic structure, and frontier orbital energy in the osmium carbyne complex OsCl₃ (≡CCH₂CMe₃ )(PH₃ )₂ using MPW1PW91 quantum chemical computations. We demonstrate the nature of the chemical bond between the [OsCl₃ (PH₃ )₂]⁻ and [CCH₂CMe₃ ]⁺ fragments through energy and charge decomposition analyses. We also estimate the percentage composition in terms of the specified groups of frontier orbitals for this complex to investigate the feature in the metal–ligand bonds. Quantum theory of atoms in molecules (QTAIM ) is applied to elucidate the Os≡C bond in the complex. Also, the influence of external electric field on the energy, frontier orbital energies, and HOMO–LUMO gap values is analyzed.     

环状二聚三(邻甲基苄基)氢氧化锡的合成、结构及量子化学研究

三(邻甲基苄基)锡氯化锡在氢氧化钠溶液中水解, 合成了环状二聚三(邻甲基苄基)氢氧化锡, 经X射线衍射方法测定了化合物的晶体结构, 属三斜晶系, 空间群为P-1, 晶体学参数: a＝1.00530(18) nm, b＝1.03580(18) nm, c＝1.08182(18) nm, α＝90.151(3)°, β＝108.317(3)°, γ＝94.871(3)°, V＝1.0650(3) nm3, Z＝1, Dc＝1.380 g/cm3, m(Mo Kα)＝0.1205 cm－1, F(000)＝451, R1＝0.0330, Rw＝0.0822. 化合物为由Sn2O2构成的平面四元环结构, 锡原子为五配位的三角双锥构型. 对其结构进行量子化学从头计算, 探讨了化合物的稳定性、分子轨道能量以及一些前沿分子轨道的组成特征.     

Combined experimental and computational modeling studies on 3,5‐dimethyl‐pyrazole‐1‐carbodithioic acid benzyl ester

The title compound, 3,5‐Dimethyl‐pyrazole‐1‐carbodithioic acid benzyl ester, has been synthesized and structurally characterized by X‐ray single crystal diffraction, elemental analysis, IR spectra, and UV‐Vis spectrum. The crystal belongs to orthorhombic, space group P212121, with a = 5.3829(15), b = 11.193(3), c = 21.824(6) Å, V = 1315.0(6) ų, and Z = 4. The molecules are connected via intermolecular C–H···N hydrogen bonds into 1D infinite chains. The crystal structure is consolidated by the intramolecular C–H···S hydrogen bonds. Furthermore, Density functional theory (DFT) calculations of the structure, stabilities, orbital energies, composition characteristics of some frontier molecular orbitals and Mulliken charge distributions of the title compound were performed by means of Gaussian 03W package and taking B3LYP/6‐31G(d) basis set. The time‐dependent DFT (TD‐DFT) calculations have been employed to calculate the electronic spectrum of the title compound, and the UV‐Vis spectra has been discussed on this basis. The results show that DFT method at B3LYP/6‐31G(d) level can well reproduce the structure of the title compound. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

含三苯胺类富勒烯吡咯烷衍生物的合成、表征及理论计算

N-Methyl-2-（4-N,N-diphenylaminophenyl）fulleropyrrolidine and N-methyl-2-（4-di-p-tolylaminophenyl）fulleropyrrolidine were synthesized via the 1,3-dipolar cycloaddition reactions under microwave irradiation. The molecular structures were identified and characterized by MS, UV-Vis, FT-IR, ^1H NMR and fluorescence spectra. Photoinduced intramolecular electron transfer process from C60 moiety to triphenylamine moiety have been studied by nanosecond laser flash photolysis. The optimized structure and the distribution of the frontier molecular orbitals for C60-TPA were obtained by using DFT method at B3LYP/6-31G（d） level. The results indicated that the intramolecular photoinduced electron transfer could occur in these compounds, which were in excellent agreement with the nanosecond transient absorption spectra observed experimentally in polar solvent. The electronic spectrum of the compound C60-TPA was studied by ZINDO method on the basis of the optimized geometrics, which was essentially consistent with experimental values.     

2-Propylamino-5-[4-(2-hydroxy-3,5-dichlorobenzylideneamino) phenyl]-1,3,4-thiadiazole: X-ray and DFT-calculated structures

2-Propylamino-5-[4-(2-hydroxy-3,5-dichlorobenzylideneamino) phenyl]-1,3,4-thiadiazole, formulated as C₁₈H₁₆Cl₂N₄OS (I), was synthesized. The crystal and molecular structure of (I) have been determined by ¹H-NMR, IR, and X-ray single crystal diffraction. The compound (I) crystallizes in the monoclinic, space group P2(1)/c with unit cell parameters a = 9.0576(2) Å, b = 24.3382(8) Å, c = 9.0585(2) Å, M _r = 407.31, V = 1851.13(9) Å³, Z = 4, R ₁ = 0.036, and wR ₂ = 0.096. Molecular geometry from X-ray experiment of (I) in the ground state has been compared using the density functional method (B3LYP) with 6-31G(d) basis set. To determine conformational flexibility, molecular energy profile of (I) was obtained by semi-empirical (PM3) calculations with respect to selected degree of torsional freedom, which was varied from ?180° to +180° in steps of 10°. The results are indicative that the Schiff base, which contains a thiadiazole ring, prefers to be in E-configuration. In addition, molecular electrostatic potential, frontier molecular orbitals, and natural bond orbitals analysis were performed by the B3LYP/6-31G(d) method.     

Theoretical and experimental study of the vertical excitation energies in the ionic and tautomeric forms of 4-aminomethylpyridine

4-Aminomethylpyridine (4-PAM) has been widely used as a model compound to elucidate the mechanisms of biological and biomedical action of the amino derivatives of vitamin B₆. By virtue of the presence of two ionizable groups (viz. a pyridine nitrogen and an amino function) in its structure, 4-PAM in solution occurs as various ionic and tautomeric forms in equilibrium. In this work, we optimized the geometries of such forms and found the protonation status of the ionizable groups in 4-PAM to affect the molecular geometry and frontier orbitals. In addition, we determined the experimental electronic excitation energies for each molecular species of 4-PAM from deconvoluted UV–vis spectra. The results thus obtained were compared with their theoretical counterparts as determined from TD-DFT calculations. Based on the outcome, the theoretical methodology used affords correct simulation of electronic excitation energies. The theoretical and experimental results showed that the deprotonation of the pyridine nitrogen has no effect on the energy of the first electronic transition, however it affects its intensity. Additionally, the deprotonation of both pyridine nitrogen and methylamino group increases the number of bands, by increasing the n–π^* transitions.     

Dynamic stability of silacarbonyl ylide

The structure of silacarbonyl ylide in the singlet gound state is obtained by ab initio quantum chemical calculations. This proves the recent experimental observation of silacarbonyl ylide by the photolysis of oxasilitane [W. Ando, K. Hagiwara, and A. Sekiguchi, Organometallics 6, 2270 (1987)]. The dynamic stability of the silacarbonyl ylide is studied by the TCSCF /3-21G ^(*) method. The second-order Jahn-Teller effect is examined in connection with the active role of frontier orbitals. Configuration analysis is used to clarify characteristic electronic structure of the silylene-carbonyl interaction.     

8-羟基喹啉锰配合物电子结构和光谱性质的含时密度泛函研究

采用密度泛函理论(DFT)B3LYP方法, 对8-羟基喹啉锰配合物进行结构优化, 探讨了配合物的结构、分子轨道能级和组成、电荷分布和转移等; 采用含时密度泛函理论(TDDFT)B3LYP/6-31G(d,p)方法对配合物的电子结构进行计算, 获得其吸收光谱. 结果表明, Mn(Ⅲ)与8-羟基喹啉中的N原子和O原子形成不对称六配位的稳定配合物, 金属锰对前线轨道的贡献很大, 在HOMO轨道中占28.53%, 在LUMO轨道中占68.30%; 中心金属锰(Ⅲ)强烈地参与发光, 电子在基态与激发态之间的跃迁, 主要是中心金属锰及8-羟基喹啉配体间的电荷转移, 在可见光区存在2个强度较大的吸收峰, 分别位于756.8 nm和532.7 nm处. 通过对双分子体系的研究发现, 相邻2个分子之间能够进行微量电荷的转移, 分子间的相互作用对前线轨道组成有明显的影响.     

Theoretic study of the electronic spectra of neutral and cationic PaO and PaO2

The electronic spectra of neutral PaO and PaO₂ and their mono- (PaO⁺, PaO₂ ⁺) and dications (PaO²⁺, PaO₂ ²⁺) were studied by performing multiconfigurational quantum chemical calculations at the CASSCF/CASPT2 level of theory taking into account spin–orbit coupling. Including the protactinium 7s, 6d, and 5f orbitals as well as selected orbitals of oxygen in the active space, the vertical excitation energies at the ground-state geometries have been computed up to ca. 36,000 cm^?1. The gas-phase electronic spectra at 298 and 3,000 K were evaluated on the basis of the computed oscillator strengths.     

Photoelectron spectra of potassium salts of hydrotris(pyrazol-1-yl)borates: electronic structure of the electron withdrawing scorpionates Tp(CF3)2, Tp*Cl and comparison to Tp* and Tp

The electronic structures of the potassium salts of the homoscorpionates hydrotris(3,5-dimethylpyrazol-1-yl)borate (Tp*, 1), hydrotris(4-chloro-3,5-dimethylpyrazol-1-yl)borate (Tp*^Cl, 2) and hydrotris(3,5-bis(trifluoromethyl)pyrazol-1-yl)borate (Tp^(CF₃)₂, 3) are compared using gas-phase photoelectron spectroscopy and density functional theory (DFT). DFT calculations also are reported for the generic scorpionate potassium (hydrotris(pyrazol-1-yl)borate) (KTp). This is the first such experimental probe of the electronic structure of halogen containing scorpionate ligands and subtle differences in the ionizations from the frontier orbitals in the photoelectron spectra of 1 and 3 are observed that give insight into the influence of substituents upon metal–scorpionate bonding. Distinct assignments of the ionizations from the nitrogen σ-donor orbitals (σ_N) and σ_BH molecular orbitals are possible experimentally by the use of variable (He I and He II) excitation energies. The experimentally observed first ionization energy of 3 is stabilized by ∼2.0 eV relative to 1 due to the strong electron withdrawing effect of the trifluoromethyl groups. The photoelectron spectroscopic studies of NaTp^(CF₃)₂ further confirm the assignments of ionizations from σ_N orbitals for 3 associated with the a and e sets in C₃ symmetry. The X-ray crystal structure of 2 as the (μ-aqua)₃(potassium hydrotris(4-chloro-3,5-dimethylpyrazol-1-yl)borate)₂ dimer is also reported.     

氰乙基对几种芳胺结构和光谱的影响

采用量子化学中密度泛函理论(DFT)的B3LYP方法分别用6-31G*和6-311+G*基组对苯胺、对氯苯胺和对甲苯胺及其氰乙基衍生物的几何构型进行全优化, 探讨了氨基上氰乙基的引入对分子电荷转移、前线轨道能量和电子光谱等性质的影响规律. 在此基础上采用含时密度泛函方法(TD-DFT)计算了分子第一激发态的电子跃迁能, 得到最大吸收波长λmax. 计算结果表明, 氨基上氰乙基的引入, 对前线分子轨道组成影响虽然小, 但使得最大吸收波长红移, 与实验值λmax有较好的一致性, 发现该类物质主要吸收光谱源于分子内的π→π*的电子跃迁.     

三苄基碘化锡的合成、晶体结构和量子化学研究

三苄基氯化锡与碘乙酸在苯溶剂中反应,合成了三苄基碘化锡。经X射线衍射方法测定了化合物的晶体结构。该晶体属三方晶系,空间群R3,晶体学参数a=1.6891(2)nm,b=1.6891(2)nm,c=0.60371(12)nm,γ=120°,Z=3,V=1.4917(4)nm3,Dc=1.733g.cm-3,μ(Mo Kα)=2.835 mm-1,F(000)=750,R1=0.072 2,wR2=0.171 2。中心锡与亚甲基碳和碘原子构成畸型四面体。对其结构进行量子化学从头计算,探讨了化合物的稳定性、分子轨道能量以及一些前沿分子轨道的组成特征。