Density functional theory study of the Fourier transform infrared and Raman spectra of Cu(II) bis-acetylacetone

Fourier transform infrared and Fourier transform Raman spectra of Cu(II) bis-acetylacetone have been obtained. The geometry, frequency and intensity of the vibrational bands of this compound and its 1,5-(13)C(2), 3-(13)C, 1,3,5-(13)C(3), 2,4-(13)C(2), (18)O(2) and 2,4-(13)C(2)-(18)O(2) derivatives were obtained by the density functional theory (DFT) with the B3LYP functional and using the 6-31G(*) and 3-21G(*) basis sets. The calculated frequencies are compared with the solid infrared and Raman spectra. All the measured infrared and Raman bands were interpreted in terms of the calculated vibrational modes. The percentage of deviation of the bond lengths and bond angles gives a good picture of the normal modes, and serves as a basis for the assignment of the wavenumbers. Most computed bands are predicted to be at higher wavenumbers than the experimental bands. The calculated geometrical parameters show slight differences compared with the experimental results. These differences can be explained by the different physical state of Cu(II) bis-acetylacetone. The DFT-B3LYP calculations assumed a free molecule in the gas phase. Analysis of the vibrational spectra indicates a strong coupling between the chelated ring modes.     

Fourier transform infrared and Raman spectra, vibrational assignment and density functional theory calculations of naphthazarin

FT Raman and FTIR spectra of Naphthazarin (5,8-dihydroxy-1,4-naphthoquinone) and its deuterated analogue are recorded. Comparison between the spectra obtained by two techniques, a series of density functional theory (DFT) calculations and the spectral behavior upon deuteration were used for the assignment of the vibrational spectra of this compound. The calculated vibrational frequencies by the B3LYP, B3PW91, G96LYP, G96P86, and MPWLYP density functionals are generally consistent with the observed spectra. Infrared and Raman vibrational transitions predicted by B3LYP/6-311++G** are reported for the titled compound and its deuterated analogous and the assignments are discussed. All experimental and theoretical results support a relatively weak hydrogen bond in naphthazarin (NZ), compared with that in the enol form of normal beta-diketones. The observed nuOH/nuOD and gammaOH/gammaOD appear at about 3060/2220 and 790/560 cm(-1), respectively, which are consistent with the calculated hydrogen bond geometry and proton chemical shift results. Two bands at about 350 and 290 cm(-1) are assigned to the O...O stretching modes belong to A1 and B2 species, respectively.     

Fourier transform Raman and infrared and surface-enhanced Raman spectra for rhodamine 6G

The vibrational spectra of rhodamine 6G (R6G) are discussed on the basis of Fourier transform infrared and Fourier transform Raman spectra obtained far from resonance which are compared with resonance Raman and surface-enhanced resonance Raman spectra obtained with excitation at 457.9 nm. The behaviour of several bands is described and tentative assignments are proposed. Stong resonance Raman effects are observed for bands assignable to xanthene ring stretching modes and also xanthene ring deformation modes. Some of these are sensitive to the complexing of R6G with silver colloids.     

Fourier transform infrared and Raman spectra of N-di-isopropylphosphorylguanidine (DPG)

The Fourier transform infrared and the Fourier transform Raman spectra of N-di-isopropylphosphorylguanidine (DPG) in the solid state and in aqueous solution were recorded and analyzed. Assuming Cs symmetry for different structural fragment of the molecule, the experimental and calculated band assignments of the nu(NH), delta(HNH), delta(CNH), nu(C=N), nu(PN), nu(CN), nu(PO) and nu(OC) normal modes suggested that the DPG exists as a tautomeric contribution of the phosphorylamine (I) and N-phosphorylimine (II) structural forms. [structures: see text]     

Density functional theory study of the fourier transform infrared and Raman spectra of dichloro-bis(2,4-pentanedionate)tin(IV).

Fourier transform infrared and Fourier transform Raman spectra of dichloro-bis(2,4-pentanedionate)tin(IV) have been obtained. Density functional theory (DFT) BLYP calculations, have been carried out with the purpose of understanding the metal-ligand region spectra of this compound. Vibrational wavenumbers calculated by BLYP/6-31G* force fields are closed with the experimental results. The percentage of deviation of the bond lengths and bond angles gives a good picture of the normal modes, and serves as a basis for the assignment of the wavenumbers. The calculated geometrical parameters show slight differences compared with the experimental ones, and these differences can be explained by the different physical state of Sn(acac)2Cl2. The DFT-BLYP calculations assumed a free molecule in the gas phase. The experimental wavenumbers are obtained from the spectra of solid samples.     

Fourier transform infrared and Raman spectral investigations of 5-aminoindole

Fourier transform infrared (FT-IR) and Raman (FT-Raman) spectra of 5-aminoindole has been recorded and analysed. The FT-IR spectrum of the compound was recorded in a BrukerIFS 66 V spectrometer in the range 4000-400 cm(-1) and the FT-Raman spectrum was also recorded in the same instrument in the region 3500-100 cm(-1). Observed frequencies for normal modes are compared with those calculated form normal co-ordinate analysis. The shift in the frequencies of the fundamental modes with the substituent amino group and the mixing of different normal modes are discussed with the help of potential energy distribution (PED) calculated through normal co-ordinate analysis.     

Structural analysis and Fourier transform infrared and Raman spectra of dibutoxyphosphoryl benzylisothiourea

A structural analysis for dibutoxyphosphoryl benzylisothiourea (DBBT) was carried out by mass spectrometry, 1H NMR, 13C NMR, infrared and Raman spectroscopy. The Fourier transform infrared and Fourier transform Raman spectra of liquid of DBBT were carried out with the purpose of studying the tautomerism (structures I and II) and the behavior of the more polar absorption's bands in different solvents, i.e., absorption's of the P=O and C=N bands. The results suggest the existence of tautomerism in the pure (liquid) compound and in solution of CHCl(3), CH(2)Cl(2), CHBr(3), and THF, C(2)H(4)Cl(2) and C(2)H(4)Br(2). The solvent interaction with the P=O band was characterized by the presence of a new band in the region of the O-H absorption. A vibrational assignment of the IR bands and Raman shifts was done and is proposed in this paper.     

Fourier transform infrared and Raman spectral assignments and analysis of 7-amino-4-trifluoromethylcoumarin

FTIR and FT-Raman spectra of 7-amino-4-trifluoromethylcoumarin (ATMC) have been recorded in the range 4000-400 and 3500-100 cm(-1), respectively, using Bruker IFS 66 V spectrometer. A detailed vibrational analysis has been carried out and assignments of the observed fundamental bands have been proposed on the basis of peak positions, relative intensities, fundamentals, overtones and combination bands. With hope of providing more and effective information on the fundamental vibrations, a normal co-ordinate analysis has been performed by assuming C(S) point group symmetry. The simple valance force field (SVFF) has been employed in normal co-ordinate analysis and to calculate the potential energy distribution (PED) for each fundamental vibration are reported. The PED contribution to each of the observed frequencies shows the reliability and precision of the spectral analysis.     

Density functional theory studies on tautomeric stability and infrared and Raman spectra of some purine derivatives

The molecular vibrations of 6-hydroxy-purine (6HP) and 6-amino-purine (6AP) were investigated in polycrystalline sample, at room temperature by Fourier transform infrared (FTIR) and FT-Raman spectroscopy. The spectra of the above compounds have been recorded in the region 4000-50, 3500-100 cm(-1), respectively. They were interpreted with the aid of normal coordinate analysis following full structure optimization and force field calculations based on density functional theory (DFT) using HF/6-31G* and B3LYP/6-311+G** methods and basis set combinations. The results of the calculations were applied to simulated infrared and Raman spectra of the title compounds, which showed excellent agreement with the observed spectra. The dipole moment and the tautometric stability of purine derivatives were also studied.     

Density functional theory studies on tautomeric stability and infrared spectra of 2-chloroadenine

The tautomeric stability and vibrational IR spectrum of 2-chloroadenine were studied using density functional theory (DFT) at B3LYP/6-31G* level. The amino N(9)H tautomer of 2-chloroadenine was predicted to be most stable. A scaled quantum mechanical (SQM) force field approach was used to calculate the vibrational frequencies of amino N(9)H form of 2-chloroadenine. The force constant scale factors were transferred from those of purine. The mean deviation between the predicted vibrational frequencies and the observed ones is 8.0 cm(-1). The results made it possible to give complete assignments of the IR spectrum of this molecule.     

Theoretical surface-enhanced Raman spectra study of substituted benzenes I. Density functional theoretical SERS modelling of benzene and benzonitrile

This paper reports a DFT modelling of SERS spectra for benzene and benzonitrile on the basis of a simple noncoordinate substrate-adsorbate model. Assignment of normal modes was obtained from internal force constants and potential energy distribution matrices and used to identify, according the SERS selection rules, the orientation of the optimized molecules on the metallic surface. Calculated band enhancements are in good agreement with experimental observations. The optimized geometry parameters of the molecule-Ag system, changes of HOMO-LUMO energies are discussed to give insight in the different SERS mechanisms for both molecules.     

A preliminary study of the Fourier transform Raman spectra of polystyrenes

The Fourier transform Raman spectra of several isotactic and atactic polystyrene samples are presented. Correlations between the spectra and the crystallinity and conformation of the samples are discussed.     

Fourier transform infrared emission spectra of MgH and MgD

High resolution Fourier transform infrared emission spectra of MgH and MgD have been recorded. The molecules were generated in an emission source that combines an electrical discharge with a high temperature furnace. Several vibration-rotation bands were observed for all six isotopomers in the X (2)Sigma(+) ground electronic state: v=1-->0 to 4-->3 for (24)MgH, v=1-->0 to 3-->2 for (25)MgH and (26)MgH, v=1-->0 to 5-->4 for (24)MgD, v=1-->0 to 4-->3 for (25)MgD and (26)MgD. The new data were combined with the previous ground state data, obtained from diode laser vibration-rotation measurements and pure rotation spectra, and spectroscopic constants were determined for the v=0 to 4 levels of (24)MgH and the v=0 to 5 levels of (24)MgD. In addition, Dunham constants and Born-Oppenheimer breakdown correction parameters were obtained in a combined fit of the six isotopomers. The equilibrium vibrational constants (omega(e)) for (24)MgH and (24)MgD were found to be 1492.776(7) cm(-1) and 1077.298(5) cm(-1), respectively, while the equilibrium rotational constants (B(e)) are 5.825 523(8) cm(-1) and 3.034 344(4) cm(-1). The associated equilibrium bond distances (r(e)) were determined to be 1.729 721(1) A for (24)MgH and 1.729 157(1) A for (24)MgD.     

Fourier transform Raman and IR spectra of snake skin

The Fourier transform (FT) Raman and IR spectra of the shed dorsal skin of the snake Elaphe obsoleta (American black rat snake) are reported. Vibrational spectroscopic assignments are proposed for the first time. Although good quality Raman spectra were obtained from the hinge regions using an FT Raman microscope, the dorsal scale regions fluoresced even with 1064 nm IR excitation. This was ascribed to pigmentation markings on the scales.     

The Fourier Transform Raman and infrared spectra of naphthazarin

The FT Raman spectra of the three naphthazarin polymorphs have been recorded for the first time and compared with the FTIR spectra of the polymorphs and of naphthazarin with deuterated hydroxyl groups. It is possible to distinguish between the polymorphs, to deduce that the room temperature static symmetry point group of naphthazarin is C_2v, to assign the ν(CH), σ(OH), γ(OH) vibrations and to confirm the absence of the ν(OH) mode.     

Density functional theory studies on the Raman and IR spectra of meso-tetraphenylporphyrin diacid

The vibrational spectra of meso-tetraphenylporphyrin diacid (H4TPP2+) have been studied with the density functional theory. Raman and IR spectra of H4TPP2+ and its N-deuterated analogue (D4TPP2+) are measured and compared with the computational results. Complete assignments of observed IR and Raman bands were proposed on the bases of calculation results. The DFT calculations reproduce 140 observed fundamentals with the RMS 8.6 cm-1. The computational as well as the experimental results reveal that the saddle-distortion of porphyrin macrocycle for the diacid leads to a significant effect on its vibrational spectra. Especially, several out-of-plane skeletal modes, which were either unobserved or very weak in the Raman spectra of CuTPP and H2TPP, are activated in the Raman spectra of the diacids. In addition, enhancement for the Raman bands of phenyl CC stretching modes were observed and attributed to the conjugation effect of pi-systems of the phenyl and the porphyrinato macrocycles.     

Fourier transform infrared spectra and molecular structure of 5-methoxytryptamine,N-acetyl-5-methoxytryptamine and N-phenylsulfonamide-5-methoxytryptamine

5-Methoxytryptamine (5-MT) is a potent antioxidant and has radioprotective action. N-acetyl-5-methoxytryptamine (melatonin, NA-5-MT) is a free radical scavenger and antioxidant, which protects against oxidative damage due to a variety of toxicants. The infrared spectra of 5-MT, NA-5-MT and new synthesized N-phenylsulfonamide-5-methoxytryptamine (PS-5-MT) were investigated in the region between 4000 and 400 cm(-1). Vibrational assignments of the molecules have been made for fundamental modes on the basis of the group vibrational concept, infrared intensity and comparison with the assignments for related molecules. X-ray powder diffraction patterns of molecules were also recorded. In order to optimize the geometries of the molecules, molecular mechanic calculations (MM3) were performed. Conformational analysis of 5-MT, NA-5-MT and PS-5-MT was also established by the using PM3 method.     

Analysis of vibrational spectra of 5-fluoro, 5-chloro and 5-bromo-cytosines based on density functional theory calculations

The geometry, frequency and intensity of the vibrational bands 5-fluoro, 5-chloro and 5-bromo-cytosines (5-FC, 5-ClC and 5-BrC) were obtained by the density functional theory (DFT) calculations with Becke3-Lee-Yang-Parr (B3LYP) functional and 6-31G* basis set. The effects of fluorine, chlorine and bromine substituents on the vibrational frequencies of cytosines have been investigated. The assignments have been proposed with the aid of the results of normal coordinate analysis. The observed and the calculated spectra are found to be in good agreement.     

Density functional theory calculations of structure, FT-IR and Raman spectra of S-phenyl thioacetate

A catalyst composed of a Pd(5)Cu mixed oxide supported over Al(2)O(3)-CeO(2) with general formula Pd(5)CuO(x)/Al(2)O(3)-CeO(2) (Al/Ce atomic ratio=1/1) has been prepared by a wet impregnation method and tested in the methanol conversion. The structural and morphological characterization of the catalyst evidences that it is a mesoporous material thermally stable up to 873 K. At that temperature the specific surface area value is 170 m(2)/g, and a CeO(2) cubic phase is identified together with ill-defined diffraction peaks tentatively assigned to Cu-Pd clusters, suggesting that the active phase is well dispersed over the support. Infrared studies prove that methanol conversion takes place over the catalyst to a high extent yielding syngas as main product in the range 473-723 K and methane at higher temperatures. Oxygenated intermediates containing methoxy, carbonile or formiate species are not detected, which evidences that methanol conversion to methane very probably takes place according to a via-carbide mechanism.     

Attenuated total reflection Fourier transform infrared spectra of faceted diamonds

In this work, the contributions of cationic and elemental gold on roughened gold substrates to surface-enhanced Raman scattering (SERS) of polypyrrole (PPy) films were first investigated. First, a gold substrate was roughened by a triangular wave oxidation-reduction cycle (ORC) in an aqueous solution containing 0.1 M KCl. Then, the roughened gold substrate was further reduced by applying a cathodic potential for a fixed time to control the quantity of unreduced cationic Au on the roughened Au substrate. The result indicates that the content of cationic Au is responsible for the improved SERS of PPy electrodeposited on this roughened Au substrate. This phenomenon can be attributed to the interfacial charge transfer from PPy to the roughened Au substrate by the aid of cationic Au.