五员碳环、氮环和磷环比较的量子化学研究

用密度泛函(DFT)理论中的B3LYP和从头算(abinitio)理论中UHF,在6-31G基组水平上,对五员碳环、氮环和磷环进行几何优化计算,由所得结果讨论了分子的成键情况,对两类环(一类是C5H5、N5、P5;另一类是C5H5-、N5-和P5-)的相对稳定性分别作比较。结果表明:有机五员碳环比无机五员氮环、磷环稳定,而五员氮环与五员磷环相比,磷环更稳定。     

The conformational flexibility of nucleic acid bases paired in gas phase: a Car-Parrinello molecular dynamics study

The flexibilities of pyrimidine and imidazole rings in the paired nucleobases are investigated using Car-Parrinello molecular dynamics simulation in gas phase. The pairing influence on the stiffness of rings is analyzed based on the molecular structure of the nucleobases and constraints caused by pairing. We prove that the flexibilities of pyrimidine rings in isolated state have subtle correlation with the degree of aromaticity of the rings. The pairings in nucleic base pairs cause the rings to be more rigid for G, T, and U but more flexible for A and the same for C.     

Do Sulfonamides Interact with Aromatic Rings?

Aromatic rings form energetically favorable interactions with many polar groups in chemical and biological systems. Recent molecular studies have shown that sulfonamides can chelate metal ions and form hydrogen bonds, however, it is presently not established whether the polar sulfonamide functionality also interacts with aromatic rings. Here, synthetic, spectroscopic, structural, and quantum chemical analyses on 2,6-diarylbenzenesulfonamides are reported, in which two flanking aromatic rings are positioned close to the central sulfonamide moiety. Fine-tuning the aromatic character by substituents on the flanking rings leads to linear trends in acidity and proton affinity of sulfonamides. This physical-organic chemistry study demonstrates that aromatic rings have a capacity to stabilize sulfonamides via through-space NH–π interactions. These results have implications in rational drug design targeting electron-rich aromatic rings in proteins.     

Structural and electronic effects involving pyridine rings in 4-methylpyridine Cu4OX6L4 complexes. II. Correlations based on molecular structure of the Cu4OCl6(4-Mepy)4 complex

Correlations involving bond lengths and bond angles in the molecular structure of the Cu₄OCl₆(4-Mepy)₄ complex (4-Mepy = 4-methylpyridine) with four symmetrically independent molecules present in the unit cell showed that the donor-acceptor behavior involving the π-back donation into the pyridine rings of the 4-Mepy ligands is most effectively stimulated by a suitable orientation of the pyridine rings in the trigonal bipyramidal geometry. The pyridine ring planes are almost in parallel orientation with one of the three Cu-Cl bonds. The bond lengths of these Cu-Cl bonds are in a significant linear correlation with the Cu-N bond lengths and the bonds lengths of the pyridine rings. The pyridine rings orientation is affected by distortion of the trigonal bipyramidal geometry to tetragonal pyramidal coordination, by out-of plane pyridine rings deviation and in-plane pyridine rings tilting, by puckering of the pyridine rings and by the effects of the methyl groups. The pyridine rings in at least seven of the sixteen trigonal bipyramidal coordinations exhibit an orientation supporting the π-back bonding between the Cu(II) atoms and the pyridine rings.     

ATOMIC FORCE MICROSCOPY STUDIES OF POLYCAPROLACTONE RINGED SPHERULITES*

The surface morphology of free-surface PCL ringed spherulites was investigated by using atomic forcemicroscopy. The spherulites were obtained by crystallization of PCL/PVC blends of different compositions. It was found thatthe ringed spherulite exhibited regularly fluctuating rings on its surface. Compared with the bright-dark ring pattern of thespherulite under a polarizing microscope, it was proved that the optical characteristics of the ringed spherulite underpolarizing microscope coincided with its surface characteristics. The bright rings in polarizing micrographs of the spherulite coincided with the convex rings on its surface, while the dark rings coincided with the concave rings.     

Ring connectivity: measuring network connectivity in network covalent solids

In atomistic models of amorphous materials, ring statistics provide a measure of medium-range order. However, while ring statistics tell us the number of rings present in the model, they do not give us any information about the arrangement of rings, e.g., whether the rings are clustered and how big the cluster is. In this work we present a method to calculate the ring connectivity, or clustering, of rings. We first calculate the rings present in the model using the shortest path criteria of Franzblau and then find the rings that are connected together and group them into clusters. We apply our method to a set of models of disordered carbons, obtained using a reverse Monte Carlo procedure developed in a recent work. We found that in these carbon models the five-, six-, and seven-membered rings are connected together, forming clusters. After isolating the clusters, we found that they resemble defective graphene segments twisted in a complex way. The clusters give further insight about the arrangement of carbon atoms in microporous carbons at a larger length scale. Moreover, the method can be applied to any network covalent solid that contains rings and thus gives information about the ring connectivity present in such materials.     

Selective cross-catenation of Pd(II) and Pt(II) coordination rings

The reversible cross-catenation of two different coordination rings (Pd(II)- and Pt(II)-linked rings) has been achieved by using the labile nature of the Pd-N interaction and efficient hydrophobic contact between the rings.     

Electronic interactions in tertiary oligophenylureas

The syntheses, structures, and spectroscopy of a series of oligomeric tertiary oligophenylureas possessing one to five phenyl rings are reported. A convergent synthetic method employing tertiary monoamine and diamine building blocks is employed. NMR and molecular modeling are indicative of folded structures for all of the oligophenylureas in which adjacent phenyl rings have a splayed face-to-face geometry. NMR chemical shifts, absorption and emission maxima, and electrochemical oxidation potentials are all dependent upon the number of phenyl rings. The addition of a first inner phenyl has a pronounced effect on the chemical shifts, while a second and third inner phenyl have diminished effects. The oxidation potentials of the oligophenylureas display an abrupt decrease upon the addition of the second inner phenyl. The absorption and emission spectra are relatively insensitive to the addition of one to three inner phenyl rings. The electronic structures of the oligophenylureas possessing one to eight rings have been analyzed using ZINDO calculations. The frontier orbitals of the ureas with one to three phenyl rings are localized on a single phenyl ring (the inner ring for the three-ring urea), whereas the frontier orbitals of the higher oligomers are delocalized over two phenyl rings. In all cases, urea-localized n,pi* transitions are lower in energy than the phenyl-localized pi,pi* transitions. The changes in properties with added phenyl rings parallel those previously observed for multilayered cyclophanes; however, they are less pronounced because of weaker coupling between the phenyl rings of the oligophenylureas.     

Kinetics of the formation of Liesegang rings

The kinetics of the formation of Liesegang rings is considered and they are classified. The relationship between the position of the propagating diffusion front and the moments of the formation of Liesegang rings is shown. In order to describe the formation processes of the Liesegang rings a generalized model based on the diffusion equation hierarchy is proposed. The kinetics of changes in the dispersed phase sizes at the initial stage of the formation of Liesegang rings is studied.     

Dimerization of Pyramidalized 3,4,8,9‐Tetramethyltetracyclo [4.4.0.03,9.04,8]dec‐1(6)‐ene to a Hydrocarbon Featuring Four Cyclohexane Rings in Boat Conformations

The synthesis, chemical trapping, and dimerization of a highly pyramidalized alkene is reported. Its dimer is a unique nonacycle featuring three planar cyclobutane rings, four cyclopentane rings, and four cyclohexane rings in boat conformations. The X‐ray diffraction analysis showed a H–H distance between the flagpole hydrogen atoms of 1.999 Å and a separation of 2.619 Å between the two flagpole carbon atoms. The three cyclobutane rings of the dimer were thermally stable.     

Magic electron counts and bonding in tubular boranes

Ring stacking in some closo-borane dianions and the hypothetical capped borane nanotubes, predicted to be stable earlier, is analyzed in a perturbation theoretic way. A "staggered" building up of rings to form nanotubes is explored for four- and five-membered B(n)H(n) rings. Arguments are given for the stacking of B(5)H(5) rings being energetically more favorable than the stacking of B(4)H(4) rings. Elongated B[bond]B distances in the central rings are predicted for some nanotubes, and the necessity to optimize ring-cap bonding is found to be responsible for this elongation. This effect reaches a maximum in B(17)H(17)(2-); the insertion of additional rings will reduce this elongation. These closo-borane nanotubes obey Wade's n + 1 rule, but the traditional explanation based on a partitioning into radial/tangential molecular orbitals is wanting.     

General route to the total synthesis of sempervirine analogues containing modified E rings, potential cytostatics

Sempervirine analogues 13a–c with different E rings have been obtained via inverse electron demand Diels–Alder reactions of 5-acetyl-3-(methylsulfanyl)-1,2,4-triazine with cyclic enamines (formation of D and E rings) followed by Fischer indole synthesis under microwave irradiation on solid support (formation of A and B rings) and subsequent annulation of indole derivatives 10a–c via a directed metallation route (formation of C rings).     

Lateral Extension of a Benzodithiophene System: Construction of Heteroacenes Containing Various Chalcogens

A series of linear acenes with five fused rings, which contain thiophene, selenophene, and tellurophene as the outmost rings, have been synthesized from well‐known benzodithiophene (BDT). It was found that the optical, electrochemical properties and crystal packing motifs could be modulated by changing heteroatoms in the outmost rings.     

meso-Aryl triphyrin(2.1.1)

Synthesis, spectral, and single-crystal X-ray structural analysis of meso-aryl triphyrin(2.1.1) featuring three pyrrole rings and four meso-aryl rings are described. The title compound represents the first example of a ring-contractedmeso-aryl β-unsubstituted free-base triphyrin containing only pyrrole rings reported to date and generates 2-D supramolecular assembly in the solid state.     

Exploration of Nano-Saturns: A Spectacular Sphere–Ring Supramolecular System

Saturn-like systems consisting of nanoscale rings and spheres are fascinating motifs in supramolecular chemistry. Several ring molecules are known to include spherical molecules at the center of the cavity via noncovalent attractive interactions. In this Minireview, we generalize the molecular design, the structural features, and the supramolecular chemistry of such “nano-Saturns”, which consist of monocyclic rings and fullerene spheres (mainly C₆₀), on the basis of previous experimental and theoretical studies. Ring molecules are classified into three types (loop, belt, and disk) according to their shapes and possible interactions. Whereas typical belt-shaped rings tend to form tight complexes due to the wide contact area via π–π interactions, flat disk-shaped rings generally form weak complexes due to the narrow contact area mainly via CH–π interactions. In spite of the small association energies, disk-shaped rings are attractive because such rings can mimic the planet Saturn precisely as exemplified by an anthracene cyclic hexamer–C₆₀ complex.     

Polyesters containing bicyclo[2.2.2]octane and bicyclo[3.2.2]nonane rings

Polyesters containing bicyclo[2.2.2]octane and bicyclo[3.2.2]nonane rings are prepared from 1,4-bis(carboethoxy)bicyclo[2.2.2]octane, 1,4-bis(hydroxymethyl)bicyclo[2.2.2]-octane and the 1,5-disubstituted bicyclo[3.2.2]nonane analogs. These polyesters are compared to the related polymers containing 1,4-phenylene and trans-1,4-cyclohexylene rings in terms of their melting point, thermal stabilities and oxidative stabilities. The lower symmetry of the bicyclo[3.2.2]nonane ring produces lower-melting polymers than the other ring systems. The remaining three rings are approximately equivalent in their effect on the melting point of a polymer provided that no more than one bicyclo[2.2.2]octane ring is present per polymer repeat unit. Two such rings produce a highermelting polymer than any other combination. Both the thermal and oxidative stabilities of the polyesters is improved by the presence of the bicyclo rings. This is attributed to the rings providing an approximation of a ladder polymer.     

On the configuration of five-membered rings: a spin-spin coupling constant approach

Five-membered rings are clearly among the most common structural motifs found in chemistry and biology. Nevertheless, the configuration of conformationally mobile five-membered rings is often difficult to assign from nuclear magnetic resonance (NMR) data. A simple, reliable, and efficient approach for the stereochemical analysis of five-membered rings based on the measurement of NMR coupling constants is presented. Density functional theory calculations using representative conformations of the full conformational space available to rings with different substitution patterns were used to identify differences between the accessible coupling constant values for cis and trans relative orientations of the substituents. The calculations were assessed experimentally using NMR data obtained from a number of models. This approach can be easily used to analyze different five-membered rings, such as oxolanes, cyclopentanes, furanosides and pyrrolidines, and their relative configuration can be determined without the need for making further conformational considerations.     

Effect of ring strain on nucleophilic substitution at selenium: a computational study of cyclic diselenides and selenenyl sulfides

Nucleophilic substitution reactions of small rings incorporating selenium are examined using computational methods. The potential energy surfaces of HS- and HSe- with 1,2-diselenirane, 1,2-diselenetane, 1,2-diselenolane, and 1,2-diselenane were computed at B3LYP/6-31+G(d) and MP2/6-31+G(d). The reactions of three-, four-, five-, and six-membered rings incorporating the S-Se bond with HS- were computed at B3LYP/6-31+G(d). The strained three- and four-membered diselenides and selenenyl sulfide rings undergo SN2 reactions, while the five- and six-membered rings react via the addition-elimination pathway, a path that invokes a hypercoordinate selenium intermediate. The strain in the small rings precludes the addition of a further ligand to either heteroatom. Substitution at selenium is both kinetically and thermodynamically favored over attack at sulfur.