Matrix-isolation infrared spectra of 2-, 3- and 4-pyridinecarboxaldehyde before and after UV irradiation

Three structural isomers of pyridinecarboxaldehydes (2-, 3- and 4-pyridinecarboxaldehyde) have been investigated in detail with matrix-isolation infrared spectroscopy in the 3000–600 cm⁻¹ region, combined with the UV photo-excitation and density-functional theory (DFT) calculations. Two rotamers (anti and syn) for 2- and 3-pyridinecarboxaldehyde (2- and 3-PCA, respectively) and one rotamer for 4-pyridinecarboxaldehyde (4-PCA) were identified upon photo-excitation. Most of the observed bands of each rotamer have been assigned. Both the infrared data and the results of the DFT calculations agree that the syn rotamer is a less stable isomer for 2- and 3-PCA. Formation of an intramolecular CH⋯N hydrogen bond in the anti rotamer of 2-PCA results in a shortening of the aldehyde CH bond length. The CO bond length is shortened in the syn rotamer due to the repulsion between the N and aldehyde O atoms. With 2-PCA, both photoinduced rotational isomerism and photolysis were observed upon UV irradiation.     

NMR study of 1-aryl-1,2-dicarba-closo-dodecaboranes: intramolecular C-H?O hydrogen bonding in solution

Dicarba-closo-dodecaborane(12) (carborane) has recently received much attention as a building block for supramolecular assemblies and bioactive compounds. Among carborane isomers, 1,2-dicarba-closo-dodecaborane(12) (o-carborane) has unique chemical properties, including the ability of the o-carborane C-H hydrogens to form hydrogen bonds. To evaluate intramolecular hydrogen bond formation between the o-carborane C-H hydrogen and various hydrogen bond acceptors in solution, we have designed and synthesized 1-aryl-o-carboranes 2. Intramolecular hydrogen bonding ability was evaluated by means of ¹H NMR measurement of the o-carborane C-H hydrogen signal of 2. The 1-(2-methoxyphenyl)-o-carborane derivative 2m appeared to form an intramolecular hydrogen bond between o-carborane C-H hydrogen and the oxygen atom acting as a hydrogen bonding acceptor. In this study, we present evidence for hydrogen bond formation in solution between the o-carborane C-H and hydrogen bond acceptors positioned with appropriate geometry.     

Synthesis, characterization and crystal structures of polymeric and dimeric triphenyltin(IV) complexes of 4-[((E)-1-{2-hydroxy-5-[(E)-2-(2-carboxyphenyl)-1-diazenyl]phenyl}methylidene)amino]aryls

The triphenyltin(IV) complexes of 4-[((E)-1-{2-hydroxy-5-[(E)-2-(2-carboxyphenyl)-1-diazenyl]phenyl}methylidene)amino]aryls (aryls = 4-CH₃, 4-Br, 4-Cl, 4-OCH₃) have been synthesized and characterized by ¹H-, ¹³C-, ¹¹⁹Sn-NMR, ESI mass spectrometry, IR and ^119mSn Mössbauer spectroscopic techniques in combination with elemental analysis. The crystal structures of a representative carboxylate ligand (aryl = 4-CH₃) and three Sn complexes, viz., polymeric (Ph₃Sn[O₂CC₆H₄{NN(C₆H₃-4-OH(C(H)NC₆H₄X-4))}-o])_n (X = Me (1) and Br (2)) and dimeric (Ph₃Sn[O₂CC₆H₄{NN(C₆H₃-4-OH(C(H)NC₆H₄X-4))}-o])₂ (X = OMe (4)) complexes are reported. The coordination environment in each complex is trigonal bipyramidal trans-Ph₃SnO₂. A single zwitterionic carboxylate ligand bridges adjacent Sn atoms via the carboxylate and phenoxide O atoms.     

Synthesis of a cyclic dinuclear organotin carboxylate via simultaneous debenzylation and decarbonylation reactions: X-ray crystal structure of [(PhCH2)2{O2CC6H4{N(H)N(C6H3-4(O)-5-O)}-o}Sn]2

The complex, [(PhCH₂)₂{O₂CC₆H₄{N(H)N(C₆H₃-4(O)-5-O)}-o}Sn]₂ (1), is obtained as the exclusive reaction product from the reaction of sodium 2-[(E)-2-(3-formyl-4-hydroxyphenyl)-1-diazenyl]benzoate and (PhCH₂)₃SnCl. The reaction possibly proceeds via Dakin type rearrangements where arylazosalicylaldehyde is oxidized to arylazocatechol, followed by facile Sn-C bond cleavage. Complete assignments were achieved by ¹H, ¹³C, 2D ¹H-¹¹⁹Sn HMQC (¹¹⁹Sn chemical shift), 1D gs ¹H-¹⁵N HMQC (¹J(¹⁵N, ¹H) coupling constant) NMR and ESI-MS. The crystal structure of compound 1 as determined by X-ray diffraction analyses shows a cyclic centrosymmetric dinuclear moiety linked into extended chains by pairs of long Sn?O contacts of approximately 3.2 Å. Two polymorphs were identified and their structures differ primarily in the packing arrangement afforded by the benzyl groups. In one polymorph, when viewed along the Sn?Sn vector, the benzyl groups at each Sn-atom are oriented to form an S-shape, while they form a U-shape in the second polymorph.     

Solid-state supramolecular array through cooperative π-π interactions of 1-(2-methoxyphenyl)-o-carborane

Dicarba-closo-dodecaborane (carborane) has received much attention as a building block for supramolecular assemblies and bioactive compounds. Among the carborane isomers, 1,2-dicarba-closo-dodecaborane (o-carborane) has unique chemical properties, including the ability of the o-carborane C-H hydrogens to form H-bonds. We have designed and synthesized 1-(2-methoxyphenyl)-o-carborane 1a to study its ability to form an intramolecular H-bond between the o-carborane C-H hydrogen and various H-bond acceptors both in solution and in the solid state. Intramolecular H-bonding ability in solution was evaluated by means of ¹H NMR spectroscopic measurements of the C-H hydrogen signal. The signal of the C-H hydrogen of 1a showed a remarkable downfield shift in CDCl₃ and various other solvents, i.e., the shift was almost solvent-independent. We suggest that 1a forms an intramolecular H-bond in these solvents. Crystal structure analysis of 1a showed a C-H?O distance of 2.05 Å and a nearly planar torsion angle C(2)-C(1)-C(7)-C(8) of 6.5°, indicating intramolecular C-H?O H-bond formation in the solid state. The crystal packing of 1a indicates that a supramolecular array is stabilized by cooperative π-π stacking interactions among the methoxyphenyl groups and by hydrophobic interactions of the o-carborane cages. DFT calculations indicate that the strength of the intramolecular H-bond of 1a is about 3.53 kcal/mol. These observations indicate the potential value of o-carborane in supramolecular chemistry and materials chemistry; it should be possible to design novel materials by utilizing both the H-bonding ability of the o-carborane C-H hydrogen and the high hydrophobicity of the o-carborane cage.     

In vitro degradation of poly(lactide-co-p-dioxanone)-based shape memory poly(urethane-urea)

The degradation of poly(lactide-co-p-dioxanone)-based shape memory poly(urethane-urea) (SMPU) in vitro was investigated by observing the changes of the pH value of incubation media, weight loss rate, molecular weight and scanning electron microscopy (SEM) during degradation duration of 12 weeks. Moreover, ¹H NMR was used to precisely study the degradation position by calculating the change of characteristic peaks value. The results revealed that the introduction of p-dioxanone (PDO) and -NH-(CO)- and -HN-(CO)-NH- would increase the hydrophilicity of polymer, so the degradation of SMPUs is higher than PDLLA control in the initial time, however, the degradation rate decreased in the anaphase of degradation, which can be attributed to the alkalic -NH₂ from the NH₂ and -NH-(CO), -NH-(CO)-NH-.     

Reactions of Ru(Cp) complexes with P(o-tolyl)3

Reaction of [Ru(Cp^∗)(CH₃CN)₃](PF₆) with P(o-tolyl)₃ affords [Ru(Cp^∗){(η⁶-o-tolyl)P(o-tolyl)₂}](PF₆) (4) in which the P-atom is not coordinated to the metal. The solid-state structure of 4 has been determined. A related reaction with P(p-tolyl)₃ reveals a small quantity [Ru(Cp^∗){(η⁶-p-tolyl)P(o-tolyl)₂}](PF₆), in solution, but mostly the expected bis-phosphine complex. Reaction of the Ru(IV) dication, [Ru(Cp^∗)(η³-PhCHCHCH₂)(DMF)₂](PF₆)₂, with P(o-tolyl)₃ gives a mixture of the phosphonium salt, C₆H₅CHCHCH₂P(o-tolyl)₃ (9) and the dication [Ru(Cp^∗) (η⁶-C₆H₅CHCHCH₂P(o-tolyl)₃)](PF₆)₂ (10). Salt 9 forms via attack of the P-atom on the allyl ligand. The latter product results from complexation of 9 via the phenyl group of the former allyl ligand. It would seem that the sterically demanding P(o-tolyl)₃ ligand is not readily compatible with the Ru(Cp^∗) fragment, in either the +2 or +4 oxidation state. Detailed NMR studies are reported.     

Synthesis and hybridization affinity of oligodeoxyribonucleotides incorporating 4-N-(N-arylcarbamoyl)deoxycytidine derivatives

Modified oligodeoxynucleotides incorporating 4-N-(N-arylcarbamoyl)-dC derivatives 1a-c were synthesized. The ¹H NMR spectra of 1a-c suggest that the carbamoyl group forms an intramolecular hydrogen bond with the cytosine ring nitrogen atom so that formation of a Watson-Crick base pair with the complementary guanine base is inhibited. The hybridization properties of oligodeoxynucleotides containing 1a-c were investigated by use of T_m analysis. The hybridization properties of 4-N-(N-phenylcarbamoyl)-dC (1a) were similar to those of 4-N-(N-alkylcarbamoyl)-dC derivatives reported previously. In sharp contrast to 1a, it turned out that 4-N-(N-napht-1-yl) and (N-quionol-5-yl)-dC (1b,c) have a unique property as a universal base.     

syn-π-Face- and endo-selective, inverse electron-demand Diels-Alder reactions of 3,4-di-tert-butylthiophene 1-oxide with electron-rich dienophiles

Diels-Alder reactions of 3,4-di-tert-butylthiophene 1-oxide with oxygen (or sulfur)-substituted dienophiles and with simple alkenic dienophiles, which are classified as an inverse electron-demand Diels-Alder reaction on the basis of DFT calculations, took place exclusively at the syn-π-face of the diene with respect to the SO bond to provide the corresponding adducts in high yields.     

The stereoselective synthesis of (Z)-HFCCFZnI and stereospecific preparation of (E)-1,2-difluorostyrenes from (Z)-HFCCFZnI via an unusual Pd(PPh3)4-Cu(I)Br co-catalysis approach or (Z)-HFCCFSnBu3

(Z)-HFCCFZnI was stereoselectively synthesized from activated zinc dust and (Z)-HFCCFI that was synthesized from chlorotrifluoroethene in a sequential manner. Compared to (E)-HFCCFZnI, (Z)-HFCCFZnI was more challenging to prepare in terms of sluggish metallation and formation of by-products, and underwent slower and incomplete Negishi coupling with aryl iodides. In a modification of Negishi coupling, (E)-α,β-difluorostyrenes were stereospecifically prepared in good to excellent yields under mild conditions from aryl iodides and (Z)-HFCCFZnI with the co-catalysis of Pd(PPh₃)₄/Cu(I)Br. Experimental investigation and mechanistic rationalization suggested that Cu(I)Br would be a scavenger of free ligands for the facilitation of Pd(PPh₃)₂ formation, and a supplier of ligand for the metathesis process. Alternatively, (Z)-HFCCFSnBu₃ and aryl iodides with an electron-withdrawing group underwent Stille-Liebiskind coupling to afford (E)-α,β-difluorostyrenes.     

Reactivity of TpIr(C2H4)(DMAD) with carboxylic acids. A DFT study on geometrical isomers and structural characterization

The thermally unstable adduct Tp^Me2Ir(C₂H₄)(DMAD), which was generated “in situ” by the reaction of DMAD with Tp^Me2Ir(C₂H₄)₂ (1) at low temperature, reacted with different carboxylic acids to produce the following compounds: Tp^Me2Ir(E-C(CO₂Me)CH(CO₂Me))(H₂O)(OC(O)C₆H₄R), (R = H, 2a; o-OH, 2b; o-Cl, 2c; m-Cl, 2d; o-NO₂, 2e; m-NO₂, 2f;o-Me, 2g;p-Me, 2h) and Tp^Me2Ir(E-C(CO₂Me)CH(CO₂Me))(H₂O)(OC(O)Me) 3. In the reaction of derivative 2a with Lewis bases, Tp^Me2Ir(E-C(CO₂Me)CH(CO₂Me))(L)(OC(O)C₆H₅), (L = Py, 4a; m-Br-Py, 4b; m-Cl-Py, 4c; NCMe, 5) were obtained, of which 4b and 4c were isolated as a mixture of two isomers in which the substituted pyridine ring was present at different rotational orientations. All new compounds prepared were characterized by ¹H and ¹³C{¹H} NMR spectroscopy, the structure of compounds 2d, 2h and 4a being determined by X-ray diffraction analysis. DFT was used to analyze the relative stability and the structural orientation of the isomers.     

Rhenium carbonyl compounds with (diphenyl)phosphinoalkynes and a sterically hindered phosphinoalkyne

The synthesis and characterization of two series of rhenium carbonyl complexes with P-coordinated phosphinoalkynes are reported. The anionic fac-[ReBr₂(CO)₃(Ph₂PCCR)]⁻ and neutral fac-[ReBr(CO)₃(Ph₂PCCR)₂] (R = Ph, Tol, ^tBu) complexes have been prepared and the crystal structures of fac-[ReBr₂(CO)₃(Ph₂PCCTol)]⁻ and fac-[ReBr(CO)₃(Ph₂PCC^tBu)₂] have been determined by X-ray crystallography, evidencing the presence of the uncoordinated alkyne in all these compounds. The phosphinoalkyne (o-Tol)₂PCCPh with bulky groups linked to the phosphorus atom was prepared in order to avoid the coordination of two phosphinoalkynes in cis-position around the rhenium metal. As a result, surprisingly the complex fac-[ReBr(CO)₃{(o-Tol)₂PCCPh}₂] was obtained. The crystal structure of this compound was determined confirming the cis-coordination of two bulky phosphinoalkynes in an octahedral rhenium atom. The electronic properties of the uncoordinated alkyne in these new rhenium complexes was analyzed, based on ¹³C NMR data and was compared with reported data on iron complexes. The results obtained indicate that the electronic characteristics of uncoordinated alkynes are similar in both families of complexes. Thus, the different reactivity observed between rhenium and iron complexes is related to the different nature of metallic fragments rather than to electronic features of uncoordinated alkynes.     

Experimental and theoretical study of N-(2-hydroxyethyl)morpholine betaine

N-(2-hydroxyethyl)morpholine betaine (HEMB) has been characterized by a single crystal X-ray analysis, FTIR spectroscopy and DFT calculations. The crystals are monoclinic, space group P2₁/c with a=10.273(2), b=9.360(2), c=9.447(2) Å and β=104.72(3)Å. Two molecules of HEMB form a centrosymmetric dimer (X2) connected by a pair of hydrogen bonds between the CH₂CH₂OH and COO⁻ groups, with the O?O distance of 2.672(2) Å. The morpholine ring adopts a chair conformation with the CH₂CH₂OH group in the axial and the CH₂COO⁻ group in the equatorial position. The structures of the dimer, B2, and two monomers, B1a and B1b, have been optimized by the B3LYP approach using the 6-31G(d,p) basis set. The computed structure of B2, agrees well with the experimental X2. From two stable monomeric conformers the more favored is B1a, with the intramolecular hydrogen bond with the O-H?O distance of 2.566 Å. The effects of hydrogen bonding and electrostatic interactions on the conformation of the molecules investigated have been discussed. The FTIR spectrum shows a broad absorption in the 3300-2600 cm⁻¹ region, typical of moderate O-H?O hydrogen bonds.     

Carbon-carbon and carbon-chlorine bond formation on reaction of iodine(III) reagents with the bis(alkynyl)palladium(II) motif, and structural chemistry of trans-Pd(CC-o-Tol)2(PMe2Ph)2] and trans-[PdCl(CC-o-Tol)(PMe2Ph)2]

Trans-di(ortho-tolylethynyl)bis(dimethylphenylphosphine)palladium(II) reacts above −20 °C with the iodonium reagent IPhCl₂ to give predominantly o-Tol-CC-Cl, above 15 °C with IPh₂(OTf) (OTf = triflate) to give o-Tol-CC-Ph and (o-Tol-CC)₂ in ca. 3:1 ratio, and above 10 °C with IPh(CCR)(OTf) (R = Bu^t, SiMe₃) to give predominantly o-Tol-CC-CC-R and (o-Tol-CC)₂. ³¹P NMR spectra provide evidence for detection of intermediates. The complexes trans-[Pd(CC-o-Tol)₂(PMe₂Ph)₂] and trans-[PdCl(CC-o-Tol)(PMe₂Ph)₂] are obtained on reaction of trans-[PdCl₂(PMe₂Ph)₂] with Li(CC-o-Tol) and o-Tol-CCH/Et₃N, respectively, and have been characterised by X-ray crystallography.     

Molecular structure and spectroscopic properties of N-methylmorpholine betaine complex with 4-hydroxybenzoic acid

Crystal structure of the 1:1 complex of N-methylmorpholine betaine (MMB) with 4-hydroxybenzoic acid (4-HBA) has been determined by X-ray diffraction. Crystals are orthorhombic, space group Pna2₁ with a=7.933(2), b=15.336(3), and Z=4, R=0.033. The acid molecule forms two O-H?O hydrogen bonds with two betaine molecules. The COOH group of the acid forms shorter hydrogen bond with betaine (2.587(2) Å), than the hydroxyl group (2.677(2) Å). The carbonyl oxygen atom of the acid also interacts with the methylene hydrogen atom of the betaine through C-H?O hydrogen bond (3.256(2) Å). Thus formed infinite chains parallel to the z axis are connected by other C-H?O hydrogen bonds into layers perpendicular to the x axis. The morpholine ring has a chair conformation with the methyl group in the equatorial position and CH₂COO⁻ group in the axial one. The powder FTIR and Raman spectra and semiempirical calculations of the isolated molecule confirm the structure of the complex investigated. The ¹H and ¹³C spectra indicate that in DMSO-d₆ solution, protons are not transferred from the acid to the betaine molecules.