3-C-hydroxymethyl-D-riburonic acid. Synthesis of the branched-chain uronic acid and comparison with a carbohydrate component of a naturally occurring bilirubin conjugate

A novel carbohydrate has previously been isolated from human bile as a complex glycoside of bilirubin [1]. This compound has been tentatively identified as 3-C-hydroxymethyl-D -riburonic acid. To test this structural assignment the proposed branched-chain uronic acid was synthesized. Gas chromatographic and mass spectrometric comparison of the natural and synthetic materials indicated that the proposed structure, 3-C-hydroxymethyl-D-riburonic acid, did not apply to thc natural product.     

Preparation of a growth-promoting substance, lepidimoic acid, from okra pectic polysaccharide

Lepidimoic acid, a 1,2-cis-linked disaccharide, is an interesting plant growth-promoting substance and has been synthesized from d-glucose and l-rhamnose by Kosemura et al., 1993. Fry et al., 1993, in view of the biosynthetic origin, suggested that it could be produced by the cleavage of a pectic polysaccharide such as rhamnogalacturonan. In this study lepidimoic acid was prepared from okra (Hibiscus esculentus L.) pectic polysaccharide in a passable yield by sequential decomposition reactions. The plant growth-promoting activity of the prepared lepidimoic acid was confirmed.     

Synthesis of a 56 component library of sugar beta-peptides

Many biological processes of vital importance are triggered by the molecular recognition of small carbohydrate units by proteins and receptors thus leading to the belief that carbohydrates could act as candidates for the design of new drugs. We have developed a new useful synthetic approach, which can be applied in a combinatorial manner, giving access to 1,1-di-substituted pyrans projecting amide side chains in both the alpha- and beta-directions. Thus, treatment of the readily accessible hemiketal (1) with TFA followed by trimethylsilyl trifluoromethanesulfonate (TMSOTf) in the presence of a nitrile gives dihydrooxazinones (2) via a new type of modified intramolecular Ritter reaction. The dihydrooxazinones (2) can either be isolated or used directly in reactions with a broad variety of amines. Final deprotection furnishes the 1,1-di-substituted sugar beta-peptides having the general structure (4).     

A promising methyl ester of pectic acid polysaccharide in biomedicine and pharmaceutics applications: Oxidation of methyl ester of pectic acid by alkaline hexacyanoferrate(III). A kinetic and mechanistic orientation

The oxidation of methyl ester of pectic acid (pectin) (PEC) by a hexacyanoferrate(III) ion at a constant ionic strength of 0.1 mol dm⁻³ has been investigated spectrophotometrically. The oxidation rates were found to increase with increasing the alkali concentration, indicating that the nature of reaction was base catalyzed. The agreement of [pectin] dependence of the rate constants to the Michaelis-Menten kinetics proves the formation of 1:1 intermediate complex prior to the rate-determining step. The deviation of the pseudo–first-order curves from linearity after 65-70% of reaction completion indicates the interference of some oxidation products during the reaction progression. The oxidation process was proceeding via a free-radical intervention mechanism. The activation parameters have been evaluated, and a suitable reaction mechanism is suggested and discussed.     

Synthesis with an immobilized enzyme of N-acetyl-9-O-acetyl-neuraminic acid,a sugar reported as a component of embryonic and tumor antigens.

Condensation of 2-acetamido-6-$\text{O}$-acetyl-2-deoxy-D-mannose with pyruvic acid in the presence of immobilized acylneuraminate pyruvate lyase (2.8 units) gave 5-acetamido-9-$\text{O}$-acetyl-3,5-dideoxy-D-$\text{glycero}$-D-$\text{galacto}$-2-nonulopyranos-1-onic acid ($\text{N}$-acetyl-9-$\text{O}$-acetylneuraminic acid) on the 0.3 mmole scale.     

Structure of the pectic acid of Matricaria chamomilla

Summary The main features of the structure of the pectic acid from the racemes of German chanomile have been established. The main polysaccharide chain consists of D-galacturonic acid residues in the pyranose form with -14 bonds. Isolated single-unit branches of the neutral monosaccharides galactose, arabinose, and xylose are possible. L-rhamnose, which was isolated from the degradation products of the permethylated pectic acid only in the form of 3,4-di-O-methyl-L-rhamnose is apparently included in the main polysaccharide chain.I. P. Pavlov Ryazan' Medical Institute. Translated from Khimiya Prirodnykh Soedinenii, No. 2, pp. 186–189, March–April, 1977.     

Pyroglutamic acid: a unique chiral synthon

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Structure of the sugar component of securidaside

Summary The structure of the sugar component of the new cardiac bioside securidaside, securidabiose, has been established; it is 4--(D-glucopyranosyl)-D-xylopyranose.Khimiya Prirodnykh Soedinenii, Vol. 3, No. 2, pp. 167–173, 1967     

Isolation and structural characterization of a low-molecular-weight pectic polysaccharide SHPPB-1 isolated from sunflower heads

A novel low-molecular-weight pectic polysaccharide was isolated from sunflower heads that are a useless side product produced from sunflower oil processing. The low-molecular-weight pectic polysaccharide was purified by using an optimized four-step procedure and named as SHPPB-1. The molecular weight of SHPPB-1 is about 1.69× 10⁴ Da. Structure characterizations of SHPPB-1 by monosaccharide composition, methylation analysis, and Fourier transform infrared (FT-IR) spectroscopy showed that SHPPB-1 is consisted of 1,4-linked α-D-GalpA and 1,4-linked 2-OAc-5-COOMe-α-D-GalpA with rare α/β-D-Rhap, α/β-D-Manp, and α/β-D-GalpA. This was combined with NMR spectroscopic analysis to propose a structure of SHPPB-1 as: →4)-[α/β-D-monosaccharide-(1→3)]-α-D-GalpA-(1→4)-2-OAc-5-COOMe-α-D-GalpA-(1→ .     

Synthesis and structural studies of peptides containing a glucose-derived furanoid sugar amino acid

Conformational analysis of peptides containing a glucose-derived furanoid sugar amino acid (Gaa) by detailed NMR and constrained MD studies revealed that peptides with repeating Gaa-Leu-Val units had conformational signatures very similar to those of linear homooligomers of Gaa.     

Synthesis and structural studies of peptides containing a mannose-derived furanoid sugar amino acid

A mannose-derived furanoid sugar amino acid (Maa) induced helical turns in peptides having repeat units of Maa(Bn(2))-Phe-Leu, which aggregated into head-to-tail duplexes in the longer oligomers.     

Engineering biosynthetic pathways for deoxysugars: branched-chain sugar pathways and derivatives from the antitumor tetracenomycin

Sugar biosynthesis cassette genes have been used to construct plasmids directing the biosynthesis of branched-chain deoxysugars: pFL942 (NDP-L-mycarose), pFL947 (NDP-4-deacetyl-L-chromose B), and pFL946/pFL954 (NDP-2,3,4-tridemethyl-L-nogalose). Expression of pFL942 and pFL947 in S. lividans 16F4, which harbors genes for elloramycinone biosynthesis and the flexible ElmGT glycosyltransferase of the elloramycin biosynthetic pathway, led to the formation of two compounds: 8-alpha-L-mycarosyl-elloramycinone and 8-demethyl-8-(4-deacetyl)-alpha-L-chromosyl-tetracenomycin C, respectively. Expression of pFL946 or pFL954 failed to produce detectable amounts of a novel glycosylated tetracenomycin derivative. Formation of these two compounds represents examples of the sugar cosubstrate flexibility of the ElmGT glycosyltransferase. The use of these cassette plasmids also provided insights into the substrate flexibility of deoxysugar biosynthesis enzymes as the C-methyltransferases EryBIII and MtmC, the epimerases OleL and EryBVII, and the 4-ketoreductases EryBIV and OleU.     

Synthesis of a 2,3,4-triglycosylated rhamnoside fragment of rhamnogalacturonan-II side chain A using a late stage oxidation approach

Pectic polysaccharide RG-II, a key component of plant primary cell walls, is known to exist as a dimer formed by means of borate diester cross-links between apiosyl residues of one of its constituent side-chain oligosaccharides. Described herein is the strategy for the synthesis of the branched tetrasaccharide alpha-d-GalA-(1-->2)-[beta-D-GalA-(1-->3)]-[alpha-L-Fuc-(1-->4)]-alpha-L-Rha-OMe, an RG-II fragment that is linked to the apiosyl residue that is thought to be responsible for the borate complexation in RG-II dimer. Iterative glycosylation of the rhamnoside acceptors derived from the key 2,3-orthoacetate of methyl 4-O-methoxybenzyl-alpha-d-rhamnopyranoside afforded the protected tetrasaccharide. The target dicarboxylic acid saccharide was subsequently prepared by removal of protecting groups followed by TEMPO-mediated oxidation of galactopyranosyl residues to galactopyranosyluronic acids.     

Synthesis of cyclic oligomers of a modified sugar amino acid utilising dynamic combinatorial chemistry

Dynamic combinatorial chemistry has been utilised for the rapid synthesis of a library of cyclic oligomers based on a modified furanoid sugar amino acid repeat unit.     

Creation of unique supramolecular nanoarchitectures utilizing natural polysaccharide as a one-dimensional host

We recently revealed that β-1,3-glucans act as unique natural nanotubes, which can accept functional polymers and molecular assemblies in an induced-fit manner. A variety of individual conjugated polymers or molecular assemblies can be incorporated into the one-dimensional hollow constructed by the helical superstructure of β-1,3-glucans to create water-soluble one-dimensional nanocomposites. The advantageous point of the present hosting system is that the selective modification of β-1,3-glucans leads to the creation of various functional one-dimensional nanocomposites in a supramolecular manner. Furthermore, the composites with functional surfaces can act as one-dimensional building blocks toward further hierarchical self-assembles, leading to the creation of two- or three-dimensional nanoarchitectures, which are applicable for fundamental nanomaterials.     

Synthesis of pseudaminic acid, a unique nonulopyranoside derived from pathogenic bacteria through 6-deoxy-AltdiNAc

Chemical synthesis of pseudaminic acid is described. Starting from N-acetylglucosamine, deoxygenation and deoxyamination with stereo-inversion afforded 6-deoxy-AltdiNAc, which is the key intermediate for the biosynthesis of pseudaminic acid. Subsequently, the elongation reaction via In-mediated allylation of 6-deoxy-AltdiNAc with bromomethacrylate ester derivative followed by ozonolysis and hydrolysis gave the desired pseudaminic acid. Furthermore, we demonstrated glycosylation with dibenzyl phosphite derivative of pseudaminic acid as the glycosyl donor to afford disaccharide.