Ag(I)-based tectons for the construction of helical and meso-helical hydrogen-bonded coordination networks

The new ligand 4-(3-(2-pyridyl)pyrazol-1-ylmethyl)benzoic acid (L) has been prepared and characterized. This bifunctional ligand incorporates both a chelating region, with two nitrogen donors, suitable for chelating to soft transition metal ions, and a self-complementary hydrogen-bonding region which can facilitate intermolecular association of ligands or ligand-based complexes. X-ray structural analysis of the ligand shows it to adopt a one-dimensional helical polymeric structure, with adjacent ligands hydrogen bonded to each other. Reaction of L with silver(I) salts (AgOTf (1, 1.1.5H(2)O), AgNO(3) (2), AgPF6 (3.CH(3)OH), and AgClO(4) (4.CH(3)OH)) results in the formation of complexes with 2:1 stoichiometries. X-ray structural analysis of these complexes shows that, in each case, one-dimensional chain structures are obtained where chiral AgL(2) tectons are hydrogen bonded together, either directly or mediated by anions or solvent. Structures with either helical or meso-helical structures are observed.     

A triple helical calcium-based coordination polymer with strong blue fluorescent emission

A hydrothermal reaction of 1,3-dicyanobenzene and Ca(OH)₂ yielded a triple helical calcium-based coordination polymer of the formula, C₂₀H₂₅Ca_2.50O_18.50 (1). The 1,3-benzenecarboxylate anion, found in the final product was generated in situ during the synthesis by the hydrolysis of 1,3-dicyanobenzene. X-ray diffraction study shows that the complex 1 crystallizes in the monoclinic system, C2/c space group, a=15.5701(5), b=21.4445(7), c=17.1601(6) Å, β=111.7400(7)°, V=5322.1(3) Å³, Z=8, D_c=1.651 Mg/m³. The calcium atoms show differences in the coordination environments. Complex 1 emits strong blue fluorescent light (λ_em(max)=419 nm) when it is excited by UV light (λ_ex(max)=316 nm) in the solid state at room temperature.     

Self-assembly of metal-organometallic coordination networks

A range of neutral metal-organometallic coordination networks (MOMNs) containing both backbone and pendant metal sites have been synthesized and characterized. These materials consist of metal ions or metal ion clusters as nodes that are linked by the bifunctional “organometalloligand” (η⁴-benzoquinone)Mn(CO)₃⁻, which binds through the quinone oxygen atoms. The resulting MOMNs can be rationally designed to a significant extent based upon a knowledge of the electronic and geometrical requirements of the metal ion nodes, the solvent, organometalloligand substituents, and the presence or absence of organic spacers. An impressive range of architectures have been accessed in this manner, suggesting that the use of π-organometallics in coordination directed self-assembly holds much promise.     

Molecular tectonics: from enantiomerically pure sugars to enantiomerically pure triple stranded helical coordination network

The self-assembly between a bis-monodentate tecton based on two pyridine units connected to an enantiomerically pure isomannide stereoisomer and HgCl2 leads to the formation of an enantiomerically pure triple stranded helical infinite coordination network which was structurally characterised by X-ray diffraction on single crystal.     

Self-assembly of lanthanide mixed-carboxylates coordination polymers

Two new mixed-ligands lanthanide coordination polymers, [Ln(Ac)(ip)(H₂O)₂]·0.5H₂O (Ln=La (1); Ln=Eu (2); Ac=acetate; ip=isophthalate) have been synthesized under hydrothermal condition. Single-crystal X-ray analyses show that complexes 1 and 2 are three-dimensional structure in which lanthanide ions are bridged by monocarboxylate ligand, acetate or dicarboxylate ligand, isophthalate. And the central lanthanide ions, La³⁺ and Eu³⁺, are both nine-coordinate with oxygen atoms. The thermogravimetric analysis was carried out to examine the thermal stability of the title complexes. And the photoluminescence property of complex 2 was also investigated.     

Self-assembly of naphthalene diimides into cylindrical microstructures

We have designed two rod-shaped compounds each incorporating a naphthalene diimide core and two terminal carboxylic acids. Both molecules aggregate in aqueous solution and spontaneously organize into cylindrical microstructures on the surface of solid substrates. Presumably, hydrogen bonds between the carboxylic acid termini and hydrophobic contacts between the naphthalene diimide cores are mainly responsible for the formation of these supramolecular arrays. Indeed, extended stacks of molecules self-assemble with close contacts between their aromatic cores in single crystals grown from polar solvents.     

Self-assembly of a cavitand-based heteronuclear coordination cage

A new self-assembly protocol leading to the formation of heteronuclear coordination cage 10 is reported. Reaction of tetradentate cavitand ligand 1, bearing one ethynylpyridine and three benzonitriles at the apical positions, with Pt(dppp)OTf₂ and Pd(dppp)OTf₂ in a 1:3 ratio yields 10 as the thermodynamic product. Under the same conditions, the self-assembly of 1 with either Pt or Pd metal precursors gives a mixture of isomeric homonuclear cages 8a-c or 9a-c, respectively.     

Self-assembly and anion encapsulation properties of cavitand-based coordination cages

Two novel classes of cavitand-based coordination cages 7a--j and 8a--d have been synthesized via self-assembly procedures. The main factors controlling cage self-assembly (CSA) have been identified in (i) a P--M--P angle close to 90 degrees between the chelating ligand and the metal precursor, (ii) Pd and Pt as metal centers, (iii) a weakly coordinated counterion, and (iv) preorganization of the tetradentate cavitand ligand. Calorimetric measurements and dynamic (1)H and (19)F NMR experiments indicated that CSA is entropy driven. The temperature range of the equilibrium cage-oligomers is determined by the level of preorganization of the cavitand component. The crystal structure of cage 7d revealed the presence of a single triflate anion encapsulated. Guest competition experiments revealed that the encapsulation preference of cages 7b,d follows the order BF(4)(-) > CF(3)SO(3)(-) > PF(6)(-) at 300 K. ES-MS experiments coupled to molecular modeling provided a rationale for the observed encapsulation selectivities. The basic selectivity pattern, which follows the solvation enthalpy of the guests, is altered by size and shape of the cavity, allowing the entrance of an ancillary solvent molecule only in the case of BF(4)(-).     

Self-assembly of highly ordered Peptide amphiphile metalloporphyrin arrays

Long fibers assembled from peptide amphiphiles capable of binding the metalloporphyrin zinc protoporphyrin IX ((PPIX)Zn) have been synthesized. Rational peptide design was employed to generate a peptide, c16-AHL(3)K(3)-CO(2)H, capable of forming a β-sheet structure that propagates into larger fibrous structures. A porphyrin-binding site, a single histidine, was engineered into the peptide sequence in order to bind (PPIX)Zn to provide photophysical functionality. The resulting system indicates control from the molecular level to the macromolecular level with a high order of porphyrin organization. UV/visible and circular dichroism spectroscopies were employed to detail molecular organization, whereas electron microscopy and atomic force microscopy aided in macromolecular characterization. Preliminary picosecond transient absorption data are also reported. Reduced hemin, (PPIX)Fe(II), was also employed to highlight the material's versatility and tunability.     

Self-assembly dynamics of a cylindrical capsule monitored by fluorescence resonance energy transfer

The constituent cavitands of a cylindrical capsule were labeled with donor and acceptor fluorophores, and fluorescence resonance energy transfer (FRET) was employed as a tool to study the dynamics of self-assembly. When donor and acceptor dyes are present in the same capsular assembly, they are brought within 25 A of each other, a distance suitable for efficient energy transfer to occur between them. This allowed for the study of interacting species at nanomolar concentrations providing information unattainable from NMR experiments. The kinetic stability of the capsule in the presence of various guest molecules was investigated which revealed a range of more than 4 orders of magnitude in the rates of cylindrical capsule exchange. While the thermodynamic stability of the capsule generally dictates the self-assembly dynamics, it was discovered that longer rigid guests can impart a significant kinetic barrier to monomer exchange.     

Self-assembly of dendronized perylene bisimides into complex helical columns

The synthesis of perylene 3,4:9,10-tetracarboxylic acid bisimides (PBIs) dendronized with first-generation dendrons containing 0 to 4 methylenic units (m) between the imide group and the dendron, (3,4,5)12G1-m-PBI, is reported. Structural analysis of their self-organized arrays by DSC, X-ray diffraction, molecular modeling, and solid-state (1)H NMR was carried out on oriented samples with heating and cooling rates of 20 to 0.2 °C/min. At high temperature, (3,4,5)12G1-m-PBI self-assemble into 2D-hexagonal columnar phases with intracolumnar order. At low temperature, they form orthorhombic (m = 0, 2, 3, 4) and monoclinic (m = 1) columnar arrays with 3D periodicity. The orthorhombic phase has symmetry close to hexagonal. For m = 0, 2, 3, 4 ,they consist of tetramers as basic units. The tetramers contain a pair of two molecules arranged side by side and another pair in the next stratum of the column, turned upside-down and rotated around the column axis at different angles for different m. In contrast, for m = 1, there is only one molecule in each stratum, with a four-strata 2(1) helical repeat. All molecules face up in one column, and down in the second column, of the monoclinic cell. This allows close and extended π-stacking, unlike in the disruptive up-down alteration from the case of m = 0, 2, 3, 4. Most of the 3D structures were observed only by cooling at rates of 1 °C/min or less. This complex helical self-assembly is representative for other classes of dendronized PBIs investigated for organic electronics and solar cells.     

Self-assembly of two- and three-dimensional particle arrays by manipulating the hydrophobicity of silica nanospheres

The surface hydrophobicity of colloidal silica (SiO2) nanospheres is manipulated by a chemical graft of alkyl chains with silane coupling agents or by physical adsorption of a cationic surfactant. The surface-modified SiO2 spheres can be transferred from the aqueous phase to organic solvents and readily self-assemble at the water-air interface to form two-dimensional (2D) particle arrays. Closely packed particle monolayers are obtained by adjusting the hydrophilic/hydrophobic balance of the synthesized SiO2 spheres and may further be transferred onto solid substrates layer by layer to form three-dimensional (3D) ordered particle arrays with a hexagonal close-packed (hcp) crystalline structure. The 2D monolayer and 3D multilayer SiO2 films exhibit photonic crystal properties, which were determined by the UV-visible spectroscopic analysis in transmission mode. In the multilayer films, the Bragg diffraction maxima increased with an increase in thickness of the particle layers. The experimentally observed diffraction positions are in good agreement with those that were theoretically calculated.     

Self-assembly of folded m-phenylene ethynylene oligomers into helical columns

Circular dichroism spectroscopy has been used to study the self-assembly of two series of m-phenylene ethynylene oligomers in highly polar solvents. The helical conformation of shorter oligomer lengths was found to be stabilized in aqueous acetonitrile solutions, while longer oligomers began to interact intermolecularly. The intermolecular aggregation of the oligomers in aqueous solutions revealed a chain length dependent association that required the presence of a stable helical conformation. Evidence for intermolecular interactions is provided by Sergeants and Soldiers experiments in which the twist sense bias of a chiral oligomer is transferred to an achiral oligomer.     

A facile processing way of silica needle arrays with tunable orientation by tube arrays fabrication and etching method

A simple method to fabricate silica micro/nano-needle arrays (SNAs) is presented based on tube-etching mechanism. Using silica fibers as templates, highly aligned and free-standing needle arrays are created over large area by simple processes of polymer infiltration, cutting, chemical etching and polymer removal. Their sizes and orientations can be arbitrarily and precisely tuned by simply selecting fiber sizes and the cutting directions, respectively. This technique enables the needle arrays with special morphology to be fabricated in a greatly facile way, thereby offers them the potentials in various applications, such as optic, energy harvesting, sensors, etc. As a demonstration, the super hydrophobic property of PDMS treated SNAs is examined.     

Self-assembly and structure of interconverting multinuclear inorganic arrays: a

Coordination of the pentatopic ligand 3 with AgI leads to the simultaneous self-assembly of two polynuclear architectures: a [4 x 5] grid-type species 10 and a quadruple-helicate 11, which contain twenty and ten silver ions. respectively. Their structures have been established by X-ray diffraction analysis of the crystals obtained as a mixture on crystallisation. Complex 10 contains two [2 x 5]-AgI10 rectangular subgrids located on opposite sides of an array of parallel ligands of 3 that are twisted into a transoid N=C-C=N arrangement around the central C-C bond; it may thus be formulated as a grid of grids: [2 x (2 x 5)]. Complex 11 is an inorganic quadruple helicate that consists of two sets of two parallel ligands of 3 connected by an array of ten silver ions. Both compounds 10 and 11 are novel types of polynuclear complexes that are composed of two subunits. Their formation points to the possibility of generating specific arrays of metal ions by self-assembly, involving, in particular, a combination of subunits within the overall entity. They represent organised patterns of ion dots of special significance in view of their formal relationship to quantum dots.     

Self-assembly of amphiphiles with terthiophene and tripeptide segments into helical nanostructures

We previously reported a class of tripeptide amphiphiles known as peptide lipids that self-assemble into one-dimensional nanostructures with superhelical twisting. The pitch of this supramolecular twisting is controlled directly through sterics in the molecular structure of hydrophobic segments. In this work we study the supramolecular behavior of these nanoscale helices by substituting with a terthiophene conjugated segment of potential electronic interest and also through variations in the stereochemistry of the tripeptide. This terthiophene peptide lipid was shown to self-assemble into one-dimensional helical nanofibers with a regular diameter of 9±1 nm and helical pitch of 65±6 nm, and also found to form hierarchical double- and triple-stranded helices, which could be associated with terthiophene J-aggregate interactions among fibers. For stereochemical effects, we compared four diastereomers in the tripeptide sequence using l-glutamic acid and l- and d-alanine residues to probe their ability to control supramolecular organization. Interestingly, we found by atomic force microscopy that the LLD diastereomers formed cylindrical nanofibers without any twisting, whereas LDD diastereomeric segments self-assembled into helical nanofibers with a pitch of 40±6 nm. LDL diastereomeric segments formed, on the other hand, aggregates without any regular shape. We propose that these profound effects of chirality with amino acid sequence are related to changes in the β-sheet sub-structure within the nanofibers.     

Self-assembly of molecular dumbbells into organized bundles with tunable size

Dumbbell-shaped molecules consisting of three biphenyls connected through vinyl linkages as a conjugated rod segment and aliphatic polyether dendritic wedges with different cross-sections (i.e., dibranch (1), tetrabranch (2) and hexabranch (3)) were synthesized and characterized. The molecular dumbbells self-assemble into discrete bundles that organize into three-dimensional superlattices. Molecule 1, based on a dibranched dendritic wedge, organizes into primitive monoclinic-crystalline and body-centered, tetragonal liquid crystalline structures, while molecules 2 and 3, based on tetra- and hexabranched dendritic wedges, respectively, form only body-centered, tetragonal liquid crystalline structures. X-ray diffraction experiments and density measurements showed that the rod-bundle cross-sectional area decreases with increasing cross-section of the dendritic wedges. The influences of supramolecular structure on the bulk-state optical properties were investigated by measuring the UV/Vis absorption and steady state fluorescence spectroscopies. As the cross-section of the dendritic wedge of the molecule increases, the absorption and emission maxima shift to higher energy. This can be attributed to a quantum size effect of the three-dimensionally confined nanostructure.