Structure and fragmentation of [C6H13O]+ ions formed by chemical ionization

The structure and fragmentation of eight [C₆H₁₃O] ⁺ ions formed by protonation of C₆H₁₂O carbonyl compounds in the gas phase have been investigated using isotopic labeling and metastable ion studies to investigate the fragmentation reactions and collisional dissociation studies to probe ion structures. Protonated 3-methyl-2-pentanone and protonated 2-methyl-3-pentanone readily-interconvert by pinacolic-retro-pinacolic rearrangements; the remaining six ions represent stable ion structures, although in many cases fragmentation is preceded by pinacolic-type rearrangements. Unimolecular (metastable ion) fragmentation of the [C₆H₁₃O] ⁺ species occurs by elimination of H₂O, C₃H₆, C₄H₈ and C₂H₄O. The last three elimination reactions appear to occur through the intermediacy of a proton-bound complex of a carbonyl compound and an olefin, with the proton residing with the species of higher proton affinity on decomposition of the complex.     

Metastable ion and induced stable ion fragmentation of isomeric 5-methyl-3-tolyl-1,2,4-oxadiazoles

The electron ionization fragmentation patterns of 5-methyl-3-(o-, m- and p-tolyl)-1,2,4-oxadiazoles (1a—c) have been examined by metastable ion and high resolution mass spectrometry. The o-tolyl isomer loses CO and C₂H₂O from the metastable molecular ion whereas the m- and p-tolyl isomers lose only CH₃CN thus indicating a strong ortho effect in directing the fragmentation in 1a. Slight differences between o-, m- and p-tolyl isomers in the collisional activation fragmentation of stable [C₇H₆N]⁺ ions suggest that structural differences exist even after a series of extensive rearrangements of the molecular ions. Metastable ion kinetic energy (MIKE) and collisional activation (CA) spectra were very helpful in providing valuable information about many fragments.     

Effect of coordination with rhodium on the selectivity of the mass spectral fragmentation of 4,4-disubstituted 2,5-cyclohexadien-1-ones

Conclusion A comparative study was carried out on the electron impact fragmentation of 4,4-disubstituted 1-oxo-2,5-cyclohexadienes and their rhodium acetylacetonate complexes. The coordination of the diene ligands with rhodium leads to an increase in the selectivity of the decomposition of the molecular ions, which occurs exclusively with loss of the most stable radical located at the geminal unit of the hydrocarbon -ligand and leads to (4-methyl-1-oxocyclohexadienyl) acetylacetonatorhodium cations.2. 15-, 16-, 17-, and 18-Electron complexes containing 4,4-dialkyl-1-oxo-2,5-cyclohexadiene (L) or 4-methyl-1-oxocyclohexadienyl ligands are obtained in the reaction of [acacRh · (CO)_n]⁺ and [(C₅H₅)Rh(CO)_n]⁺ ions (n=0–2) with 4,4-disubstituted 1-oxo-2,5-cyclohexadienes in the gas phase. The formation of [acacRh(CO)L]⁺ and [(C₅H₅)Rh(CO)L]⁺ ions indicated the reduced -donor capacity of 1-oxo-2,5-cyclohexadienes relative to 1-alkylidene-2,5-cyclohexadienes in reactions with rhodium-containing cations.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 5, pp. 1088–1093, May, 1986.     

Fragmentation of 2‐aroylbenzofuran derivatives by electrospray ionization tandem mass spectrometry

We investigated the gas‐phase fragmentation reactions of a series of 2‐aroylbenzofuran derivatives by electrospray ionization tandem mass spectrometry (ESI‐MS/MS). The most intense fragment ions were the acylium ions m/z 105 and [M+H–C₆H₆]⁺, which originated directly from the precursor ion as a result of 2 competitive hydrogen rearrangements. Eliminations of CO and CO₂ from [M+H–C₆H₆]⁺ were also common fragmentation processes to all the analyzed compounds. In addition, eliminations of the radicals •Br and •Cl were diagnostic for halogen atoms at aromatic ring A, whereas eliminations of •CH₃ and CH₂O were useful to identify the methoxyl group attached to this same ring. We used thermochemical data, obtained at the B3LYP/6‐31+G(d) level of theory, to rationalize the fragmentation pathways and to elucidate the formation of E , which involved simultaneous elimination of 2 CO molecules from B .     

Gas‐phase fragmentation reactions of protonated benzofuran‐ and dihydrobenzofuran‐type neolignans investigated by accurate‐mass electrospray ionization tandem mass spectrometry

We have investigated gas‐phase fragmentation reactions of protonated benzofuran neolignans (BNs) and dihydrobenzofuran neolignans (DBNs) by accurate‐mass electrospray ionization tandem and multiple‐stage (MSⁿ) mass spectrometry combined with thermochemical data estimated by Computational Chemistry. Most of the protonated compounds fragment into product ions B ([M + H–MeOH]⁺), C ([ B –MeOH]⁺), D ([ C –CO]⁺), and E ([ D –CO]⁺) upon collision‐induced dissociation (CID). However, we identified a series of diagnostic ions and associated them with specific structural features. In the case of compounds displaying an acetoxy group at C‐4, product ion C produces diagnostic ions K ([ C –C₂H₂O]⁺), L ([ K –CO]⁺), and P ([ L –CO]⁺). Formation of product ions H ([ D –H₂O]⁺) and M ([ H –CO]⁺) is associated with the hydroxyl group at C‐3 and C‐3′, whereas product ions N ([ D –MeOH]⁺) and O ([ N –MeOH]⁺) indicate a methoxyl group at the same positions. Finally, product ions F ([ A –C₂H₂O]⁺), Q ([ A –C₃H₆O₂]⁺), I ([ A –C₆H₆O]⁺), and J ([ I –MeOH]⁺) for DBNs and product ion G ([ B –C₂H₂O]⁺) for BNs diagnose a saturated bond between C‐7′ and C‐8′. We used these structure‐fragmentation relationships in combination with deuterium exchange experiments, MSⁿ data, and Computational Chemistry to elucidate the gas‐phase fragmentation pathways of these compounds. These results could help to elucidate DBN and BN metabolites in in vivo and in vitro studies on the basis of electrospray ionization ESI‐CID‐MS/MS data only.     

Mechanism of CO loss for protonated 1-indanone and isomeric [C9H9O]+ ions

In order to establish the mechanism of CO loss occurring during metastable decomposition of protonated 1-indanone, fragmentations of monocyclic [C₉H₉O]⁺ isomers have been studied. These ions of known structure were prepared by CI protonation and fragmentation of the corresponding acids chlorides. It is demonstrated that the wide component of the [MH? CO]⁺ metastable peak induced by protonated 1-indanone fragmentation is the result of fragmentation of the [C₆H₅CH₂CH₂CO]⁺ isomer ion.     

Unimolecular reactions of the isolated immonium ions CH3CH = NH+C4H9, CH3CH2Ch = NH+C4H9 and (CH3)2C = NH+C4H9

The reactions of ten metastable immonium ions of general structure R¹R²C?NH⁺C₄H₉ (R¹ = H, R² = CH₃, C₂H₅; R¹ = R² = CH₃) are reported and discussed. Elimination of C₄H₈ is usually the dominant fragmentation pathway. This process gives rise to a Gaussian metastable peak; it is interpreted in terms of a mechanism involving ion-neutral complexes containing incipient butyl) cations. Metastable immonium ions ontaining an isobutyl group are unique in undergoing a minor amount of imine (R¹R²C?NH) loss. This decomposition route, which also produces a Gaussian metastable peak, decreases in importance as the basicity of the imine increases. The correlation between imine loss and the presence of an isobutyl group is rationalized by the rearrangement of the appropriate ion-neutral complexes in which there are isobutyl cations to the isomeric complexes containing the thermodynamically more stable tert-butyl cations. A sizeable amount of a third reaction, expulsion of C₃H₆, is observed for metastable n-C₄H₉ ⁺NH?CR¹R² ions; in contrast to C₄H₈ and R¹R²C?NH loss, C₃H₆ elimination occurs with a large kinetic energy release (40–48 kJ mol^?1) and is evidenced by a dish-topped metastable peak. This process is explained using a two-step mechanism involving a 1,5-hydride shift, followed by cleavage of the resultant secondary open-chain cations, CH₃CH⁺ CH₂CH₂NHCHR¹R².     

Über Chalkogenolate. 139. Untersuchungen über Dialkylester von Chalkogenokohlensäuren. 2. O,Se- und S,Se-Dialkylmonothiomonoselenocarbonate

On Chalcogenolates. 139. Studies on Dialkyl Esters of Chalcogenocarbonic Acids. 2. O,Se- and S, Se-Dialkyl Monothiomonoselenocarbonates The hitherto unknown esters RSe? CS? OR′, where R = C₂H₅, ⁿC₃H₇ and R′ = C₂H₅, ⁿC₃H₇, are formed by reaction of NaSeR with Cl? CS? OR′ and of RSe? CS? Cl with HOR′. At the first time, the esters RSe? CO? SR′ with R = R′ = C₂H₅, ⁿC₃H₇ have been prepared by reaction between NaSeR and Cl? CO? SR′. The compounds have been characterized by means of diverse spectroscopic methods.     

193-nm Photodissociation of ions from saturated and unsaturated aliphatic molecules

To determine the analytical utility of photodissociation as a general fragmentation technique for tandem mass spectrometry of organic ions, the ability to fragment those ions considered least likely to absorb photons efficiently was investigated. To this end, the ability to photodissociate ions of aliphatic compounds by using 193-nm photons has been studied. Three fragment ions, the C₄H ₉ ⁺ ion from n-hexane, the C₄H ₇ ⁺ ion from 2-hexene, and C₄H ₅ ⁺ from 2-hexyne, have been photodissociated. The fragmentation efficiencies for all three ions studied were between 25 and 45%. The photofragment ion spectrum for each precursor ion studied is made up of characteristic fragments. These spectra demonstrate the ability to photodissociate aliphatic ions that originate from both saturated and unsaturated molecules. This provides substantial hope that virtually all organic ions will be able to be photodissociated by using 193-nm photons.     

VUV photoionisation of free azabenzenes: Pyridine, pyrazine, pyrimidine, pyridazine and s-triazine

Photoionisation mass spectrometry was used to obtain the fragmentation pathways of pyridine, pyridazine, pyrimidine, pyrazine and s-triazine molecules upon absorption of 23.0, 15.7 and 13.8 eV synchrotron photons. The ionic fragments observed vary from molecule to molecule, however C₂H₂⁺, HCN⁺and HCNH⁺ are common to all five molecules at the three photon energies. Furthermore, the presence of C₂H₂N₂⁺, C₃H₃N⁺ and C₄H₄⁺ in the spectra of some of the molecules suggests dissociation pathways via loss of HCN moieties. The respective parent cations, m/q=79, 80 and 81 have a greater yield at low photon energies when compared to the most intense fragment peak in each spectra. We recorded two of the fragment cation yields, as well as the parent photoion yield curves of pyridine, pyridazine, and pyrimidine in the 8–30 eV range. The formation of abundant cation fragments show a strong propensity of the molecules for dissociation after the absorption of VUV photons higher than 14 eV. The differences in relative fragment yields from molecule to molecule, and when changing the excitation energy, suggest significant bond rearrangements and nuclear motion during the dissociation time. Thus, bond cleavage is dependent on the photon energy deposited in the molecule and on intramolecular reactivity. With the aid of photoion yield curves and energy estimations we have assigned major peaks in the spectra and discussed their fragmentation pathways.     

The unusual fragmentation of long‐chain feruloyl esters under negative ion electrospray conditions

Long‐chain ferulic acid esters, such as eicosyl ferulate ( 1 ), show a complex and analytically valuable fragmentation behavior under negative ion electrospay collision‐induced dissociation ((?)‐ESI‐CID) mass spectrometry, as studied by use of a high‐resolution (Orbitrap) mass spectrometer. In a strong contrast to the very simple fragmentation of the [M + H]⁺ ion, which is discussed briefly, the deprotonated molecule, [M – H]^?, exhibits a rich secondary fragmentation chemistry. It first loses a methyl radical (MS²) and the ortho‐quinoid [M – H – Me]^‐? radical anion thus formed then dissociates by loss of an extended series of neutral radicals, C_nH_2n + 1^? (n = 0–16) from the long alkyl chain, in competition with the expulsion of CO and CO₂ (MS³). The further fragmentation (MS⁴) of the [M – H – Me – C₃H₇]^? ion, discussed as an example, and the highly specific losses of alkyl radicals from the [M – H – Me – CO]^‐? and [M – H – Me – CO₂]^‐? ions provide some mechanistic and structural insights.     

Comparative mass spectrometric investigation of transition metal polymethylcyclopentadienylcarbonyl complexes: I. Mass spectra of RnC5H5−nRe(CO)3 (R = CH3, n = 0-5; R = t-C(CH3)3, n = 1)

Mass spectra of π-(CH₃)_nC₅H_5−nRe(CO)₃ Me_nCpReT) (n = 0–5) and t-BuCpReT were recorded, from which it was found that molecular ion (M⁺) fragmentation for Me_nCpReT (_n = 0, 1) differs from that for Me_nCpReT (_n = 2–5). The (M – 2CO)⁺ ions have maximum intensity in n = 0, 1 complexes, and the (M – 2CO – H₂)⁺ ions, in _n = 2–5 complexes. H₂ elimination from (M – 2CO)⁺ is typical of rhenium π-cyclopentadienyl complex fragmentation, where the number of methyl groups in the Cp ring is > 1, and seems to occur with participation of the Re atom.     

Mass spectra of organometallic compounds: XIV—Some monometallic olefing manganese tricarbonyl derivatives

The metastable ion supported fragmentation process in the mass spectra of the cyclohexadienyl derivative C₆H₇Mn(CO)₃, the cycloheptadienyl derivative C₇H₉Mn(CO)₃, the 1,2,3,4,5-and 1,2,3,5,6-pentahaptocyclootadienyl derivatives C₈H₁₁Mn(CO)₃, the cyclooctatrienyl derivative C₈H₉Mn(CO)₃ and the substituted cyclopentadienyl derivative (CH₃)₂NCH₂C₅H₄Mn(CO)₃, are described. Losses of carbonyl groups, generally stepwise, from the molecular ions to give the corresponding [M – 3CO]⁺· ions are first observed. Further fragmentation of the carbonyl-free [M – 3CO]⁺· ions can involve a variety of processes such as the following: (a) elimination of a neutral manganese atom to give a hydrocarbon fragment; (b) elimination of a neutral hydrocarbon fragment to give an [MnH]⁺· ion; (c) dehydrogenation; (d) elimination of a 2-carbon C₂H₂ or C₂H₄ fragment; (e) elimination of a C₃H₄ or C₃H₆ fragment as a neutral species when it is bridging two carbon atoms bonded to manganese, as in C₈H₉Mn(CO)₃ and 1,2,3,4,5,h⁵-C₈H₁₁Mn(CO)₃, respectively. Fragmentation of the [M – 3CO]⁺· ion in (CH₃)₂NCH₂C₅H₄Mn(CO)₃ presents the following additional features: (a) elimination of C₆H₆ with a nitrogen shift from carbon to manganese; (b) elimination of a neutral dimethylamino fragment to give [C₆H₆Mn]⁺·, which then loses neutral C₆H₆, C₆H₅ or Mn fragments and thus is formulated tentatively as [(fulvene)Mn]⁺· or [C₆H₅MnH]⁺· rather than [(benzene)Mn]⁺·.     

Gaseous cation chemistry and chain-length effects in electron ionization and collision-induced dissociation mass spectra of symmetric 1,n-bis(9-anthracenyl)alkanes

The behavior of the gaseous cations resulting from EI (30 and 70 eV) of the bichromophoric title compounds 1–5 (for n = 1–5, respectively) is examined by ion‐trap mass spectrometry, including collision‐induced dissociation (CID) with variation in collision energy. These results are compared with those from anthracene and 9‐methylanthracene and with previously reported mass spectrometric results for 3 and dicarbazolylalkanes. Rather than using the kinetic method to obtain ion energetics where the fragmentation mechanism is clear, as commonly done, the method is used here with relative complementary‐ion abundances from CID to test the proposed fragmentation mechanisms using B3LYP calculations of relative ionization energies and optimized geometries of ionic and neutral fragments. Hydrogen migrations are common, and skeletal rearrangements including formation of expanded, fused and spiro rings are proposed in several cases. Of the chain cleavages, α‐homolysis giving C₁₅H₁₁⁺, likely as dibenzotropylium, is most important for each of 1–5 except 3, where β‐cleavage to C₁₆H₁₃⁺ dominates with a proposed methyldibenzotropylium structure. α‐Cleavage was important also in the dicarbazolylalkanes. A previous inference of a McLafferty rearrangement to explain C₁₅H₁₂^+? from 3 is not supported by the present results. The fragmentation behavior of 1–5 depends strongly on n and implies significant interchromophoric interaction between anthracenyl groups. Copyright © 2011 John Wiley & Sons, Ltd.     

Origin of the [C4H9O]+ ions in the mass spectrum of n-butyl ethyl ether

The mechanisms of formation of m/z 73 ions in the mass spectrum of the ionized title compound were investigated by deuterium substitution and by examining the decompositions of metastable ions. Two routes to the [C₄H₉O]⁺ ions were found in the normal spectrum. The ethyl lost by the major pathway contains the α- and β-hydrogens and a γ-hydrogen from the butyl group. The minor route involves the loss of ethylene from the [M? H]⁺ ion. There were metastable peaks for losses of ethyl, ethanol and methyl from the molecular ion. The ethyl contains the α- and β-methylenes and a γ-hydrogen, while the methyl is the δ-methyl of the butyl group. The labeling data rule out a previous mechanistic proposal for the loss of ethyl and support a mechanism involving stepwise isomerization to the sec-butyl ethyl ether molecular ion. However, the metastable ion chemistries of the molecular ions from the n- and sec-butyl ethyl ethers are highly dissimilar, perhaps due to decompositions from different electronic states. The n-pentyl methyl ether ions loses both ethyl and propyl, apparently following rearrangements to the 3-pentyl and 2-pentyl ether ions. Di n-butyl and n-butyl methyl ethers also give metastable peaks for loss of methyl, ethyl and the shorter chain alcohol.     

Rearrangements and fragmentations of metastable [C13H9S]+, [C14H11]+, [C13H11]+ and [C8H7S]+ ions

[C₁₃H₉S]⁺, [C₁₄H₁₁]⁺, [C₁₃H₁₁]⁺ and [C₈H₇S]⁺ ions with unknown structures were generated from two [C₁₄H₁₂S]^+·precursor ions by fragmentation reactions that must be preceded by extensive rearrangements. Ions with the same compositions, each with several initial structures, were prepared by simple bond-breaking reactions. Metastable characteristics were compared for each of the four types of ions. It was found than in all cases fast isomerization reactions occur prior to fragmentation, so that no information about the unknown ion structures could be obtained by comparison of the observed fragmentations of metastable ions.     

Mass spectrometry of heterocyclic compounds VIII–electron-impact-induced fragmentation of 1,2-diphenyl-pyrazolidine-3,5-dione and some 4-substituted derivatives

The mass spectra of 1,2-diphenyl-pyrazolidine-3,5-dione and twenty-one 4-substituted derivatives are reported. Their fragmentation patterns have been studied by deuterium labelling, exact mass measurements, metastable studies by the defocusing technique and low energy spectra. Hydrogen rearrangements from the 4-position of the heterocycle and/or from the ß-position of the 4-substituent groups, lead to the main primary fragment ions [C₁₂H₁₁N₂]⁺ (m/e 183) as shown by the metastables. The 4,4-d₂ derivative shows an appreciable isotope effect even for molecular ions decomposing in the ion source. By comparison with the metastable abundances of competitive reactions, the molecular ions (m/e 252) of the 4-unsubstituted compound appear to be structurally different from the corresponding m/e 252 fragment ions formed from 4-derivatives by the loss of 4-substituent with H rearrangement. If only vinylic or aromatic hydrogen atoms are present, primary cleavage of the heterocyclic ring occurs with loss of OH·, C₃O₂ and C₃HO₂. Important rearrangements leading to elimination of C₆H₆N and C₆H₇N are typical for unsaturated substituents on position four having allylic hydrogen atoms. Fragment ions, identical to molecular ions of some compounds discussed here, are obtained by electron-impact and/or thermal decompostion of some complex compounds containing more than one 1,2-diphenyl-pyrazolidine-3,5-dione system. The [C₆H₅N₂]⁺ (m/e 105) and [C₆H₅]⁺ (m/e 77) ions are common fragments of all the title compounds. Any hydrogen scrambling reactions between phenyl and heterocycle or 4-substituent groups can be excluded.     

Studies of isosteviol diterpenoid derivatives by mass spectrometry: II. Fragmentation of isosteviol esters under the electronic impact

Main rules of fragmentation of molecular ions of the esters of isosteviol diterpenoid (ent-16-oxobeieran-19-carboxylic acid) are established. It is shown that under the conditions of electron impact in the isosteviol esters the ester C-O and C⁴-C¹⁹ bonds are ruptured. During the fragmentation of hydroxy derivatives of isosteviol at the C¹⁶ atom the elimination of H₂O molecules is observed.     

A comparison of the unimolecular decomposition pathways of some C7 and C8 ions in the gas phase

[CnH_2n?3]⁺ and [C_nH_2n?4]⁺·(n = 7, 8) ions have been generated in the mass spectrometer from C_nH_2n?3 Br (n = 7, 8) precursors and from two steroids. The relative abundances of competing ‘metastable transitionss’ indicate (partial) isomerization to a common structure (or mixture of structures) prior to decomposition in most examples of all four types of ions. In contrast, [C₈H₁₀O]⁺· and [C₈H₁₂O]⁺· ions, generated from different sources as molecular ions and by fragmentation of steroids, do not decompose through common-intermediates.     

The redox properties of organotransition-metal complexes IV. The activation of cyclic polyolefiniron tricarbonyl derivatives by one-electron oxidation

Cyclic polyolefiniron tricarbonyl derivatives [Fe(CO)₂L(C_nH_m)] (L = CO or phosphorus donor) and oxidising agents such as Ag⁺ or [NO]⁺ in CH₂Cl₂ give reactive paramagnetic cations [Fe(CO)₂L(C_nH_m]⁺ which can abstract hydrogen from the solvent to give [Fe(CO)₂L(C_nH_{m + 1})]⁺.