首页 | 本学科首页   官方微博 | 高级检索  
相似文献
 共查询到20条相似文献,搜索用时 218 毫秒
1.
Using density functional theory calculations, we investigated the structural, energetic, electronic, and optical properties of recently synthesized duplex DNA containing metal‐mediated base pairs. The studied duplex DNA consists of three imidazole (Im) units linked through metal (Im‐M‐Im, M=metal) and four flanking A:T base pairs (two on each side). We examined the role of artificial base pairing in the presence of two distinctive metal ions, diamagnetic Ag+ and magnetic Cu2+ ions, on the stability of duplex DNA. We found that metal‐mediated base pairs form stable duplex DNA by direct metal ion coordination to the Im bases. Our results suggest a higher binding stability of base pairing mediated by Cu2+ ions than by Ag+ ions, which is attributed to a larger extent of orbital hybridization. We furthermore found that DNA modified with Im‐Ag+‐Im shows the low‐energy optical absorption characteristic of π–π*orbital transition of WC A:T base pairs. On the other hand, we found that the low‐energy optical absorption peaks for DNA modified with Im‐Cu2+‐Im originate from spin–spin interactions. Additionally, this complex exhibits weak ferromagnetic coupling between Cu2+ ions and strong spin polarization, which could be used for memory devices. Moreover, analyzing the role of counter ions (Na+) and the presence of explicit water molecules on the structural stability and electronic properties of the DNA duplex modified with Im‐Ag+‐Im, we found that the impact of these two factors is negligible. Our results are fruitful for understanding the experimental data and suggest a potential route for constructing effective metal‐mediated base pairs in duplex DNA for optoelectronic applications.  相似文献   

2.
We have demonstrated a turn‐on fluorescent sensor 6 for detection of Fe3+ based on photo‐induced electron transfer (PET) mechanism. The probe comprises a perylene tetracarboxylic diimide (PDI) fluorophore and two bis((1,2,3‐triazol‐4‐yl)methyl)amine (DTA) moieties as the metal ion receptors. It exhibits high selectivity toward Fe3+ over various other metal ions in CH3CN/H2O (1:1, V/V). The binding stoichiometry for 6 ‐Fe3+ complexes has been determined to be 1:2 by a Job plot of fluorescence. The association constant between 6 and Fe3+ was estimated to be 1.04×1010 (mol/L)?2 by Benesi‐Hildebrand equation.  相似文献   

3.
The selective and sensitive detection of biothiols; cysteine (Cys), homocysteine (Hcy) and glutathione (GSH) in aqueous solutions is of considerable importance because of their pivotal roles in maintaining the reducing environment in the cells. This study describes a strategy for the determination of biothiols based on the PDI/Met‐Hg2+complex platform. We designed and fabricated methionine modified perylene diimide molecule as a selective sensing probe for Hg2+ ions in aqueous solutions ( PDI/Met‐Hg 2+). The complex between perylene bisimide derivative ( PDI/Met) and Hg2+ was investigated and it demonstrated turn‐on fluorescence response for the detection of the biological thiols. Besides, PDI/Met displayed fluorescence quenching response in the presence of mercury ions and the emission intensity of PDI/Met‐Hg2+ was recovered after transferring biothiols (Cys, Hcy, and GSH). Thus, PDI/Met could be utilized as a fluorescent chemosensor for the sequential recognition of mercury ions and biological thiols.  相似文献   

4.
Enantiomerization of octahedral tris(α‐diimine)–transition metal complexes was investigated by enantioselective dynamic MEKC. Varying both the transition metal ion (Fe2+, Fe3+, and Ni2+) and the bidentate diimine ligand (1,10‐phenanthroline and 2,2′‐bipyridyl), the enantiomer separations were performed either in a 100 mM sodium tetraborate buffer (pH 9.3) or in a 100 mM sodium tetraborate/sodium dihydrogenphosphate buffer (pH 8.0) both containing sodium cholate as chiral surfactant. The unified equation of dynamic chromatography was employed to determine apparent reaction rate constants from the electropherograms showing distinct plateau formation. Apparent activation parameters ΔH? and ΔS? were calculated from temperature‐dependent measurements between 10.0 and 35.0°C in 2.5 K steps. It was found that the nature of the central metal ion and the ligand strongly influence the enantiomerization barrier. Surprisingly, complexes containing the 2,2′‐bipyridyl ligand show highly negative activation entropies between ?103 and ?116 J (K mol)?1 while the activation entropy of tris(1,10‐phenanthroline) complexes is positive indicating a different mechanism of interconversion. Furthermore, it was found that the Ni2+ complexes are stereostable under the conditions investigated here making them a lucent target as enantioselective catalysts.  相似文献   

5.
Novel bay‐functionalized perylene diimides with additional substitution sites close to the perylene core have been prepared by the reaction between 1,7(6)‐dibromoperylene diimide 6 (dibromo‐PDI) and 2‐(benzyloxymethyl)pyrrolidine 5 . Distinct differences in the chemical behaviors of the 1,7‐ and 1,6‐regioisomers have been discerned. While the 1,6‐dibromo‐PDI produced the corresponding 1,6‐bis‐substituted derivative more efficiently, the 1,7‐dibromo‐PDI underwent predominant mono‐debromination, yielding a mono‐substituted PDI along with a small amount of the corresponding 1,7‐bis‐substituted compound. By varying the reaction conditions, a controlled stepwise bis‐substitution of the bromo substituents was also achieved, allowing the direct synthesis of asymmetrical 1,6‐ and 1,7‐PDIs. The compounds were isolated as individual regioisomers. Fullerene (C60) was then covalently linked at the bay region of the newly prepared PDIs. In this way, two separate sets of perylene diimide–fullerene dyads, namely single‐bridged (SB‐1,7‐PDI‐C60 and SB‐1,6‐PDI‐C60) and double‐bridged (DB‐1,7‐PDI‐C60 and DB‐1,6‐PDI‐C60), were synthesized. The fullerene was intentionally attached at the bay region of the PDI to achieve close proximity of the two chromophores and to ensure an efficient photoinduced electron transfer. A detailed study of the photodynamics has revealed that photoinduced electron transfer from the perylene diimide chromophore to the fullerene occurs in all four dyads in polar benzonitrile, and also occurs in the single‐bridged dyads in nonpolar toluene. The process was found to be substantially faster and more efficient in the dyads containing the 1,7‐regioisomer, both for the singly‐ and double‐bridged molecules. In the case of the single‐bridged dyads, SB‐1,7‐PDI‐C60 and SB‐1,6‐PDI‐C60, different relaxation pathways of their charge‐separated states have been discovered. To the best of our knowledge, this is the first observation of photoinduced electron transfer in PDI‐C60 dyads in a nonpolar medium.  相似文献   

6.
EPR study showed that the semi‐quinone radical anion of 2,3‐dicyano‐5,6‐dichloro‐1,4‐benzoquinone (DDQ) was formed in a charge transfer process between ground‐state DDQ as acceptor and each one of following ground state donors, i.e., 4‐methyl‐4′‐tridecyl‐2, 2′‐bipyridyl; 4‐methyl‐4′‐nonyl‐2, 2′‐bipyridyl; bis (2,2′‐bipyridyl) (4‐methyl‐4′‐heptadecyl‐2, 2′‐bipyridyl)ruthenium(2+) perchlorate and perylene. EPR study also showed that there are perylene cation radical and pyrene cation radical in the following experimental conditions: (a) in 98% sulfuric add. (b) 10?3 mol/L perylene (or pyrene) was dissolved in trifluoroacetic acid‐nitrobenzene (1: 1 V/V).  相似文献   

7.
Studies of double‐stranded‐DNA binding have been performed with three isomeric bis(2‐(n‐pyridyl)‐1H‐benzimidazole)s (n=2, 3, 4). Like the well‐known Hoechst 33258, which is a bisbenzimidazole compound, these three isomers bind to the minor groove of duplex DNA. DNA binding by the three isomers was investigated in the presence of the divalent metal ions Mg2+, Co2+, Ni2+, Cu2+, and Zn2+. Ligand–DNA interactions were probed with fluorescence and circular dichroism spectroscopy. These studies revealed that the binding of the 2‐pyridyl derivative to DNA is dramatically reduced in the presence of Co2+, Ni2+, and Cu2+ ions and is abolished completely at a ligand/metal‐cation ratio of 1:1. Control experiments done with the isomeric 3‐ and 4‐pyridyl derivatives showed that their binding to DNA is unaffected by the aforementioned transition‐metal ions. The ability of 2‐(2‐pyridyl)benzimidazole to chelate metal ions and the conformational changes of the ligand associated with ion chelation probably led to such unusual binding results for the ortho isomer. The addition of ethylenediaminetetraacetic acid (EDTA) reversed the effects completely.  相似文献   

8.
WANG  Chengyun  TANG  Wei  ZHONG  Hanbin  ZHANG  Xuechao  SHEN  Yongjia 《中国化学》2009,27(10):2020-2024
Novel porphyrin‐perylene diimide dyad (TPP‐PDI) and porphyrin‐perylene diimide‐porphyrin triad (TPP‐PDI‐TPP) were synthesized and characterized. Their structure and properties were studied by UV, FL, 1H NMR, MS, elemental analysis, etc. The variation of fluorescence feature and UV spectra of TPP‐PDI‐TPP triad were investigated at different concentration of CF3COOH in THF. The incorporation of CF3COOH leads to the closure of the efficient charge transfer decay. After protonation of porphyrin units, the fluorescence intensity of TPP‐PDI‐TPP triad increased greatly. The fluorescence intensity of TPP‐PDI‐TPP triad restored after addition of triethylamine into the solution. Thus, TPP‐PDI‐TPP triad was a proton‐type fluorescence switch based on acid‐base control. Moreover, different from porphyrin‐perylene type molecular switches reported before, this TPP‐PDI‐TPP triad has wonderful solubility in organic solvents.  相似文献   

9.
A new C‐nucleoside structurally based on the hydroxyquinoline ligand was synthesized that is able to form stable pairs in DNA in both the absence and the presence of metal ions. The interactions between the metal centers in adjacent CuII‐mediated base pairs in DNA were probed by electron paramagnetic resonance (EPR) spectroscopy. The metal–metal distance falls into the range of previously reported values. Fluorescence studies with a donor–DNA–acceptor system indicate that photoinduced charge‐transfer processes across these metal‐ion‐mediated base pairs in DNA occur more efficiently than over natural base pairs.  相似文献   

10.
The first parallel‐stranded DNA duplex with Hoogsteen base pairing that readily incorporates an Ag+ ion into an internal mispair to form a metal‐mediated base pair has been created. Towards this end, the highly stabilizing 6 FP ‐Ag+‐ 6 FP base pair comprising the artificial nucleobase 6‐furylpurine ( 6 FP ) was devised. A combination of temperature‐dependent UV spectroscopy, CD spectroscopy, and DFT calculations was used to confirm the formation of this base pair. The nucleobase 6 FP is capable of forming metal‐mediated base pairs both by the Watson–Crick edge (i.e. in regular antiparallel‐stranded DNA) and by the Hoogsteen edge (i.e. in parallel‐stranded DNA), depending on the oligonucleotide sequence and the experimental conditions. The 6 FP ‐Ag+‐ 6 FP base pair within parallel‐stranded DNA is the most strongly stabilizing Ag+‐mediated base pair reported to date for any type of nucleic acid, with an increase in melting temperature of almost 15 °C upon the binding of one Ag+ ion.  相似文献   

11.
A polymer consisting of a polynorbornene backbone with perylene diimide (PDI) pendant groups on each monomeric unit is synthesized via ring opening metathesis polymerization. The PDI pendant groups along the polymer backbone, studied by UV–vis absorption, fluorescence emission, and electron paramagnetic resonance spectroscopy in addition to electrochemical methods, show evidence of molecular aggregation and corresponding electronic coupling with neighboring groups, which forms pathways for efficient electron transport from one group to another in a specific reduced form. When n‐doped, the title polymer shows redox conductivity of 5.4 × 10−3 S cm−1, comparable with crystalline PDI materials, and is therefore a promising material for use in organic electronics.  相似文献   

12.
Combining experiment with theory reveals the role of self‐assembly and complexation in metal‐ion transfer through the water–oil interface. The coordinating metal salt Eu(NO3)3 was extracted from water into oil by a lipophilic neutral amphiphile. Molecular dynamics simulations were coupled to experimental spectroscopic and X‐ray scattering techniques to investigate how local coordination interactions between the metal ion and ligands in the organic phase combine with long‐range interactions to produce spontaneous changes in the solvent microstructure. Extraction of the Eu3+–3(NO3?) ion pairs involves incorporation of the “hard” metal complex into the core of “soft” aggregates. This seeds the formation of reverse micelles that draw the water and “free” amphiphile into nanoscale hydrophilic domains. The reverse micelles interact through attractive van der Waals interactions and coalesce into rod‐shaped polynuclear EuIII‐containing aggregates with metal centers bridged by nitrate. These preorganized hydrophilic domains, containing high densities of O‐donor ligands and anions, provide improved EuIII solvation environments that help drive interfacial transfer, as is reflected by the increasing EuIII partitioning ratios (oil/aqueous) despite the organic phase approaching saturation. For the first time, this multiscale approach links metal‐ion coordination with nanoscale structure to reveal the free‐energy balance that drives the phase transfer of neutral metal salts.  相似文献   

13.
Charge‐transfer (CT) complexes of near‐infrared absorbing systems have been unknown until now. Consequently, structural similarities between donor and acceptor are rather important to achieve this phenomenon. Herein, we report electron donors such as non‐fused diporphyrin‐anthracene (DP), zinc diporphyrin‐anthracene (ZnDP) and fused zinc diporphyrin‐anthracene (FZnDP) in which FZnDP absorbs in NIR region and permits a CT complex with the electron acceptor, perylene diimide (PDI ) in CHCl3 exclusively. UV/Vis‐NIR absorption, 1H NMR, NOESY and powder X‐ray diffraction analysis demonstrated that the CT complex formation occurs by π–π stacking between perylene units in FZnDP and PDI upon mixing together in a 1:1 molar concentration in CHCl3, unlike non‐fused ZnDP and DP. TEM and AFM images revealed that the CT complex initially forms nanospheres leading to nanorods by diffusion of CH3OH vapors into the CHCl3 solution of FZnDP/PDI (1:1 molar ratio). Therefore, these CT nanorods could lead to significant advances in optical, biological and ferroelectric applications.  相似文献   

14.
A silver ion (Ag+)‐triggered thixotropic metallo(organo)gel of p‐pyridyl‐appended oligo(p‐phenylenevinylene) derivatives (OPVs) is reported for the first time. Solubilization of single‐walled carbon nanohorns (SWCNHs) in solutions of the pure OPVs as well as in the metallogels mediated by π–π interactions has also been achieved. In situ fabrication of silver nanoparticles (AgNPs) in the SWCNH‐doped dihybrid gel leads to the formation of a trihybrid metallogel. The mechanical strength of the metallogels could be increased stepwise in the order: freshly prepared gel<dihybrid gel<trihybrid gel. Microscopic studies of the trihybrid gel indicate the formation of three distinct morphologies, that is, nanoscale metal–organic particles (NMOPs), flowerlike aggregates of SWCNHs and AgNPs, and also their integration with each other. Detailed studies suggest lamellar organizations of the linear metal–ligand complexes in the NMOPs, which upon association create a three‐dimensional network that eventually immobilizes the solvent molecules.  相似文献   

15.
A series of perylene‐3,4,9,10‐bis(dicarboximide) (PDI) dimers linked through the bay regions was systematically synthesized to examine the electronic structures and photophysical properties in dependence on the distance and orientation between the two PDI units. The spectroscopic and electrochemical measurements suggested that the coupling value of a directly linked PDI dimer (PDI)2 is much larger than those of para‐ and meta‐phenylene‐bridged PDI dimers p‐(PDI)2 and m‐(PDI)2. The width of Davydov splitting was quantitatively evaluated to compare the coupling values between the two PDI units in these dimers by absorption spectroscopy in frozen 2‐methyl‐THF. Excimer formation of PDI dimers induced the strong fluorescence quenching and large red‐shifts. Femtosecond transient absorption revealed a broad absorption derived from an excimer in the range from about 600 nm to the near‐IR region. The rate constants of formation and decay of the excimer are strongly dependent on the coupling values. Time‐resolved measurements on ferrocene‐linked p‐(PDI)2 revealed a competition between the photoinduced processes of electron transfer and excimer formation in PhCN, which is in sharp contrast with the sole electron‐transfer process in toluene.  相似文献   

16.
Here we report a reusable DNA single‐walled carbon nanotube (SWNT)‐based fluorescent sensor for highly sensitive and selective detection of Ag+ and cysteine (Cys) in aqueous solution. SWNTs can effectively quench the fluorescence of dye‐labeled single‐stranded DNA due to their strong π–π stacking interactions. However, upon incubation with Ag+, Ag+ can induce stable duplex formation mediated by C–Ag+–C (C=cytosine) coordination chemistry, which has been further confirmed by DNA melting studies. This weakens the interactions between DNA and SWNTs, and thus activates the sensor fluorescence. On the other hand, because Cys is a strong Ag+ binder, it can remove Ag+ from C–Ag+–C base pairs and deactivates the sensor fluorescence by rewrapping the dye‐labeled oligonucleotides around the SWNT. In this way, the fluorescence signal‐on and signal‐off of a DNA/SWNT sensor can be used to detect aqueous Ag+ and Cys, respectively. This sensing platform exhibits high sensitivity and selectivity toward Ag+ and Cys versus other metal ions and the other 19 natural amino acids, with a limit of detection of 1 nM for Ag+ and 9.5 nM for Cys. Based on these results, we have constructed a reusable fluorescent sensor by using the covalent‐linked SWNT–DNA conjugates according to the same sensing mechanism. There is no report on the use of SWNT–DNA assays for the detection of Ag+ and Cys. This assay is simple, effective, and reusable, and can in principle be used to detect other metal ions by substituting C–C base pairs with other native or artificial bases that selectively bind to other metal ions.  相似文献   

17.
《化学:亚洲杂志》2017,12(8):890-899
The detection and quantification of spermine in clinical practice is important for early diagnosis of many diseases. Chromatographic and immunoassay‐based methods are commonly used. However, a fluorescence‐based assay could provide real‐time detection. Herein, the synthesis and aggregation properties of a dicationic perylene probe (N 1‐dodecyl‐N 3‐(4‐phenyl)benzimidazolium‐functionalized perylenediimide ( DAB‐PDI )) used to develop a fluorescent “turn‐on” ensemble for the detection of spermine are discussed. The fluorescence of DAB‐PDI (10 μm , Φ =0.55) is efficiently quenched by negatively charged sodium dodecylsulfate (SDS) through the formation of ionic self‐assembled aggregates (charge ratio of negative (N) in SDS to positive (P) in DAB‐PDI (N/P)=9). This negatively charged ionic self‐assembly between DAB‐PDI and SDS has been characterized by using photophysical, microscopic, dynamic light scattering, isothermal titration calorimetry, and HRMS techniques. The addition of spermine to this ensemble solution results in the breakdown of the DAB‐PDI –SDS ensemble owing to strong binding of spermine with SDS and, as a result, the fluorescence of DAB‐PDI is recovered. This ensemble exhibits high sensitivity and selectivity for spermine detection in water, urine, and blood serum. The lowest limit of detection is 27.5 nm , which is at least about 36 times lower than that required for early diagnosis of cancer (1 to 10 μm for urinary spermine).  相似文献   

18.
There is widespread interest in non‐covalent bonding and weak interactions, such as electrostatic interactions, hydrogen bonding, solvophobic/hydrophobic interactions, metal–metal interactions, and π–π stacking, to tune the molecular assembly of planar π‐conjugated organic and inorganic molecules. Inspired by the roles of metal–aromatic interaction in biological systems, such as in ion channels and metalloproteins, herein, we report the first example of the use of Hg2+–aromatic interactions to selectively control the assembly and disassembly of zinc–salen complexes in aqueous media; moreover, this process exhibited significant “turn on” fluorescent properties. UV/Vis and fluorescence spectroscopic analysis of the titration of Hg2+ ions versus complex ZnL1 revealed that the higher binding affinity of Hg2+ ions (compared to 13 other metal ions) was ascribed to specific interactions between the Hg2+ ions and the phenyl rings of ZnL1 ; this result was also confirmed by 1H NMR spectroscopy and HRMS (ESI). Further evidence for this type of interaction was obtained from the reaction of small‐molecule analogue L1 with Hg2+ ions, which demonstrates the proximity of the N‐alkyl group to the aromatic protons during Hg2+‐ion binding, which led to the consequential H/D exchange reaction with D2O. DFT modeling of such interactions between the Hg2+ ions and the phenyl rings afforded calculated distances between the C and Hg atoms (2.29 Å) that were indicative of C? Hg bond‐formation, under the direction of the N atom of the morpholine ring. The unusual coordination of Hg2+ ions to the phenyl ring of the metallosalen complexes not only strengthened the binding ability but also increased the steric effect to promote the disassembly of ZnL1 in aqueous media.  相似文献   

19.
Carboxylated peptide‐functionalized gold nanoparticles (peptide‐GNPs) self‐assemble into two‐ and three‐dimensional nanostructures in the presence of various heavy metal ions (i.e. Pb2+, Cd2+, Cu2+, and Zn2+) in aqueous solution. The assembly process is monitored by following the changes in the surface plasmon resonance (SPR) band of gold nanoparticles in a UV/Vis spectrophotometer, which shows the development of a new SPR band in the higher‐wavelength region. The extent of assembly is dependent on the amount of metal ions present in the medium and also the time of assembly. TEM analysis clearly shows formation of two‐ and three‐dimensional nanostructures. The assembly process is completely reversible by addition of alkaline ethylenediaminetetraacetic acid (EDTA) solution. The driving force for the assembly of peptide‐GNPs is mainly metal ion/carboxylate coordination. The color and spectral changes due to this assembly can be used for detection of these heavy‐metal ions in solution.  相似文献   

20.
A new material has been prepared by covalent attachment of a perylene derivative, N‐(carboxyphenyl)‐N′‐(8‐pentadecyl)perylene‐3,4:9,10‐bis(dicarboximide) (PDI‐COOH), to poly(vinyl alcohol) (PVA) by esterification. The perylenediimide (PDI)‐modified PVA polymers are soluble in water and dimethylsulfoxide (DMSO). This solubility is conferred to the insoluble perylene derivative by the water‐soluble polymer. The materials have been characterized by hydrogen‐nuclear magnetic resonance, Fourier transform infrared spectra, X‐ray diffraction, and X‐ray photoelectron spectroscopy confirming the covalent attachment of the PDI to the polymer chains. The significant changes in the crystalline parameters and the thermal stability observed for the polymer after the esterification also confirm the covalent linkage with PDI. In addition, the PDI‐modified PVA shows good fluorescence both in solution (quantum yield ~0.2–0.25) and in solid suggesting that the PDI retains largely its photochemical and photophysical properties after immobilization. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 3613–3622, 2010  相似文献   

设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号