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1.
It is shown that a long, near microsecond, atomistic simulation can shed some light upon the dynamical processes occurring in a lipid bilayer. The analysis focuses on reorientational dynamics of the chains and lateral diffusion of lipids. It is shown that the reorientational correlation functions exhibits an algebraic decay (rather than exponential) for several orders of magnitude in time. The calculated nuclear magnetic resonance relaxation rates agree with experiments for carbons at the C7 position while there are some differences for C3. Lateral diffusion can be divided into two stages. In a first stage occurring at short times, t<5 ns, the center of mass of the lipid moves due to conformational changes of the chains while the headgroup position remains relatively fixed. In this stage, the center of mass can move up to approximately 0.8 nm. The fitted short-time diffusion coefficient is D(1)=13 x 10(-7) cm(2) s(-1) On a longer time scale, the diffusion coefficient becomes D(2)=0.79 x 10(-7) cm(2) s(-1).  相似文献   

2.
Self-trapping and singlet-singlet annihilation of the free excitons in a monomeric (beta) perylene crystal were studied by using femtosecond transient absorption microscopy. The free exciton generated by the photo-excitation of the beta-perylene crystal relaxed to the self-trapped exciton with a rate constant of 7 x 10(10) s(-1). The singlet-singlet annihilation of the free exciton observed under the high excitation density conditions was competed with the self-trapping of the free exciton; we estimated the annihilation rate constant for the free exciton to be 1 x 10(-8) cm(3) s(-1) from the excitation density dependence of the free exciton decay. After self-trapping of the free exciton, no annihilation was observed in the 100 ps time range, suggesting that the diffusion coefficient was reduced drastically by self-trapping. The results show that the major factor limiting the exciton diffusion in the beta-perylene crystal is a relaxation of the free exciton to the self-trapped exciton, and not the lifetime of the exciton. Though the singlet-singlet annihilation rate constants and fluorescence lifetime of the beta-perylene crystal are similar to those of the anthracene crystal, the estimated exciton diffusion length (2 nm) in the beta-perylene crystal is much smaller than that (100 nm) in the anthracene crystal as a result of the exciton self-trapping.  相似文献   

3.
The sorption equilibrium and kinetics of cadmium ions from aqueous solution onto bone char have been studied. Equilibrium isotherms for the sorption system were correlated by Langmuir and bi-Langmuir equations. The application of the bi-Langmuir equation was developed because the mechanistic analysis in this research indicated that cadmium removal occurs ion exchange and physical adsorption onto different surface sites. The bi-Langmuir equation provides a better fit to the experimental data. In addition, the removal rates of cadmium ions based on the Langmuir models have been investigated. The effective diffusivity was calculated using the effects of initial metal ion concentration and bone char mass. Two mass-transport models based on film-pore diffusion control have been applied to analyze the concentration decay curves. The film and pore diffusion coefficients using an analytical equation are equal to 1.26x10(-3) cm/s and 5.06x10(-7) cm(2)/s, respectively. The pore diffusion coefficient obtained from the numerical method is 4.89x10(-7) cm(2)/s. A sensitivity analysis showed that the film-pore diffusion model and constant effective diffusivity could be used to describe the mass-transport mechanism of the sorption system with a high degree of correlation. Copyright 2001 Academic Press.  相似文献   

4.
We report the lateral diffusion properties of 2,2'-di-O-decyl-3,3'-di-O-(eicosanyl)-bis-(rac-glycero)-1,1'-diphosphocholine (C20BAS) using pulsed-field gradient NMR (PFG-NMR) and fluorescence recovery after photobleaching (FRAP). C20BAS membranes display a melting transition at Tm = 15.7 degrees C, as determined by differential scanning calorimetry and 31P NMR chemical shift anisotropy. The lateral diffusion coefficient of C20BAS, as determined by PFG-NMR and FRAP, at 25 degrees C, were DPFG-NMR = 1.9 +/- 0.6 x 10(-8) cm2/s and DFRAP C20BAS = 1.2 +/- 0.1 x 10(-8) cm2/s, respectively. In comparison, the lateral diffusion coefficient of the monopolar phospholipid, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), was 1.8 +/- 0.9 x 10(-8) and 2.5 +/- 0.9 x 10(-8) cm2/s using PFG-NMR and FRAP, respectively.  相似文献   

5.
The complexes of cyclohexylacetic acid and cholic acid with beta-cyclodextrin were studied by NMR diffusion coefficient measurements. The diffusion coefficient of the 1:1 cyclohexylacetic acid/beta-cyclodextrin complex, K(a) = 1800 +/- 100 M(-1), is slightly slower (3.23 +/- 0.07 x 10(-6) cm(2) s(-1)) than that of beta-cyclodextrin (3.29 +/- 0.07 x 10(-6) cm(2) s(-1)). The diffusion coefficient of the 1:1 cholic acid/beta-cyclodextrin complex, K(a) = 5900 +/- 800 M(-1), is significantly slower (2.93 +/- 0.07 x 10(-6) cm(2) s(-1)) than that of beta-cyclodextrin. The results indicate that caution should be exercised when studying host-guest complexation by the so-called 'single point' technique. A novel data treatment is introduced which takes into account the diffusion behavior of all of the species when determining K(a). Experimentally determined diffusion coefficients of complexes are also a useful probe of the size of host-guest complexes.  相似文献   

6.
The aim of this work was to investigate the diffusion of Rhodamine B into bleached, photo bleached and abraded hair, treated or not with an emulsion of ceramide using two different techniques: spectrophotometry and fluorescence optical microscopy with image analysis. This comparison, combined with the Einstein-Smoluchowski equation, allowed validating a methodology that uses the apparent diffusion coefficient of a dye as an index for hair damage. Distinct behaviors of the dye were observed in the cuticle and in the cortex. For a bleached hair sample the apparent diffusion coefficient in the cuticle ranges from 8.2 x 10(-11) cm2 s(-1) to 10 x 10(-11)cm2 s(-1), while for the cortex this value drops to 4.0 x 10(-11) cm2 s(-1) to 4.2 x 10(-11) cm2 s(-1). The diffusion is always faster in the cuticle than in the cortex and the apparent diffusion coefficient shows up to a seven-fold decrease when the dye penetrates the cortex. The chemical, photochemical and physical treatments applied to hair significantly change the values of the apparent diffusion coefficients in the cuticle. The data also proved that the penetration of Rhodamine B into hair occurs via an intercellular path.  相似文献   

7.
The translational diffusion of rubrene in the fragile molecular glass former, sucrose benzoate (SB) (fragility index m approximately 94), has been studied from T(g)+6 K to T(g)+71 K(T(g)=337 K) by using the technique of holographic fluorescence recovery after photobleaching. In the temperature range of the measurements, the translational relaxation functions were observed to decay exponentially, indicating that Fick's law of diffusion governs the translational motion of rubrene in sucrose benzoate. The value of the translational diffusion coefficient D(T) obtained from the 1e time of the translational relaxation function varied from 5.3 x 10(-15) cm2 s(-1) at 343 K to 5.0x10(-9) cm2 s(-1) at 408 K. The temperature dependence of D(T) for diffusion of rubrene in SB is compared with that of the viscosity and the dielectric relaxation time tau(D) of SB. The temperature dependence of D(T) is weaker than that of Teta for T<1.2T(g) but tracks the reciprocal of the dielectric relaxation time 1tau(D) for 1.05T(g)相似文献   

8.
Thin films of the perchlorate salt of an [Os(N,N'-alkylated-2,2'-biimidazole3)2+/3+-containing polymer have been formed on planar platinum microelectrodes. The electrochemical response associated with the Os2+/3+ couple occurs at -0.19 V. In aqueous perchlorate media at near-neutral pH the voltammetric response is close to that expected for an electrochemically reversible reaction involving a surface-confined reactant. Chronoamperometry conducted on a microsecond time scale indicates that the film and solution resistances are comparable for low concentrations of supporting electrolyte. However, for LiClO4 concentrations greater than 0.4 M, RFilm contributes less than 25% of the overall cell resistance. These results suggest that when the film is dehydrated and the density of redox centers is increased, electron or hole hopping dominates the rate of homogeneous charge transport through the film. The rate of homogeneous charge transport, characterized by D(CT)1/2Ceff, where DCT is the homogeneous charge transport diffusion coefficient and Ceff is the effective concentration of osmium centers within the film, depends weakly on the concentration of LiClO4 as supporting electrolyte decreasing from (8.1 +/- 0.16) x 10(-9) to (4.7 +/- 0.4) x 10(-9) mol cm(-2) s(-1/2) as the perchlorate concentration increases from 0.1 to 1.0 M. These values are about 2 orders of magnitude lower than those of the chemically cross-linked chloride salt of the polymer. The rate of heterogeneous electron transfer is unusually rapid in this system and increases from (5.2 +/- 0.4) x 10(-3) to (7.8 +/- 0.4) x 10(-3) cm s(-1) on going from 0.1 to 0.4 M LiClO4 before becoming independent of the supporting electrolyte concentration at (9.2 +/- 0.6) x 10(-3) cm s(-1) for [LiClO4] > or = 0.6 M.  相似文献   

9.
We have studied the mobility of active and inactive Thermomyces lanuginosus lipase (TLL) on a spin-coated trimyristin substrate surface using fluorescence recovery after photobleaching (FRAP) in a confocal microscopy setup. By photobleaching a circular spot of fluorescently labeled TLL adsorbed on a smooth trimyristin surface, both the diffusion coefficient D and the mobile fraction f could be quantified. FRAP was performed on surfaces with different surface density of lipase and as a function of time after adsorption. The data showed that the mobility of TLL was significantly higher on the trimyristin substrate surfaces compared to our previous studies on hydrophobic model surfaces. For both lipase variants, the diffusion decreased to similar rates at high relative surface density of lipase, suggesting that crowding effects are dominant with higher adsorbed amount of lipase. However, the diffusion coefficient at extrapolated infinite surface dilution, D0, was higher for the active TLL compared to the inactive (D0 = 17.9 x 10(-11) cm2/s vs D0 = 4.1 x 10(-11) cm2/s, data for the first time interval after adsorption). Moreover, the diffusion decreased with time after adsorption, most evident for the active TLL. We explain the results by product inhibition, i.e., that the accumulation of negatively charged fatty acid products decreased the diffusion rate of active lipases with time. This was supported by sequential adsorption experiments, where the adsorbed amount under flow conditions was studied as a function of time after adsorption. A second injection of lipase led to a significantly lower increase in adsorbed amount when the trimyristin surface was pretreated with active TLL compared to pretreatment of inactive TLL.  相似文献   

10.
In the present study, we applied for the first time (31)P diffusion NMR to resolve different species obtained by the addition of organophosphorus compounds (OP) such as diisopropyl phosphorofluoridate (DFP) or 1-pyrenebutyl phosphorodichloridate (PBPDC) to alpha-chymotrypsin (Cht). (31)P diffusion NMR was used since the products of these reactions constitute a mixture of OP-covalent conjugates of the enzyme and OP-containing hydrolysis products that have noninformative (1)H NMR spectra. It was shown that the peak, attributed to the covalent native diisopropylphosphoryl-Cht (DIP-Cht) conjugate by chemical shift considerations, has a greater diffusion coefficient (D = (0.65 +/- 0.01) x 10(-5) cm(2) s(-1)) than expected from its molecular mass (approximately 25 kDa). This peak was therefore suggested to consist of at least two superimposed signals of diisopropyl phosphoryl (DIP) pools of high and low molecular weights that happen to have the same chemical shift. This conclusion was substantiated by the use of DMSO-d(6) that separated the overlapping signals. Diffusion measurements performed on the extensively dialyzed and unfolded DIP-Cht conjugate still resulted in a high diffusion coefficient ((0.30 +/- 0.05) x 10(-5) cm(2) s(-1)) relative to the assumed molecular mass. This observation was attributed to a dynamic dealkylation at the OP moiety (i.e., aging) that occurred during the relatively long diffusion measurements, where DIP-Cht was converted to the corresponding monoisopropyl phosphoryl Cht (MIP-Cht) conjugate. Homogeneous aged forms of OP-Cht were obtained by use of DFP and heat-induced dealkylation of DIP-Cht, and by PBPDC that provided the aged form via the hydrolysis of a P-Cl bond (PBP-Cht). The thermally stable aged conjugates enabled a reliable determination of the diffusion coefficients over several days of data acquisition, and the values found were (0.052 +/- 0.002) x 10(-5) cm(2) s(-1) and (0.054 +/-0.004) x 10(-5) cm(2) s(-1) for the MIP-Cht and the PBP-Cht adducts, respectively, values in the range expected for a species with a molecular weight of 25 kDa. The advantages and limitations of (31)P diffusion NMR in corroborating the type of species that prevail in such systems are briefly discussed.  相似文献   

11.
Abstract Time-resolved singlet oxygen, O(2)(a(1)Delta(g)), phosphorescence experiments have been performed in single cells upon pulsed laser irradiation of a photosensitizer incorporated into the cell. Data recorded as a function of the partial pressure of ambient oxygen to which the cell is exposed reflect apparent values for the intracellular oxygen diffusion coefficient and intracellular oxygen concentration that are smaller than those found in neat H(2)O. This conclusion is supported by O(2)(a(1)Delta(g)) phosphorescence data and sensitizer triplet state absorption data recorded in control experiments on sucrose solutions with different viscosities. We recently demonstrated that the intracellular lifetime of O(2)(a(1)Delta(g)) is comparatively long ( approximately 3 mus) and does not differ significantly from that in neat H(2)O ( approximately 3.5 mus). Despite this long lifetime, however, our estimate of an apparent intracellular oxygen diffusion coefficient in the range approximately 2-4 x 10(-6) cm(2) s(-1) means that the spatial domain of intracellular O(2)(a(1)Delta(g)) activity will likely have a spherical radius of approximately 100 nm. This latter point helps reconcile seeming inconsistencies between our direct O(2)(a(1)Delta(g)) lifetime data and results obtained from independent photobleaching experiments that show a limited translational diffusion distance for O(2)(a(1)Delta(g)) within a cell.  相似文献   

12.
The temperature dependence of the exciton dynamics in a conjugated polymer is studied using time-resolved spectroscopy. Photoluminescence decays were measured in heterostructured samples containing a sharp polymer-fullerene interface, which acts as an exciton quenching wall. Using a 1D diffusion model, the exciton diffusion length and diffusion coefficient were extracted in the temperature range of 4-293 K. The exciton dynamics reveal two temperature regimes: in the range of 4-150 K, the exciton diffusion length (coefficient) of approximately 3 nm (approximately 1.5 x 10 (-4) cm2/s) is nearly temperature independent. Increasing the temperature up to 293 K leads to a gradual growth up to 4.5 nm (approximately 3.2 x 10 (-4) cm2/ s). This demonstrates that exciton diffusion in conjugated polymers is governed by two processes: an initial downhill migration toward lower energy states in the inhomogenously broadened density of states, followed by temperature activated hopping. The latter process is switched off below 150 K.  相似文献   

13.
Fully atomistic simulations are used to characterize the molecular dynamics (MD) of acridine orange (3,6-dimethylaminoacridine) at a chromatographic interface. Multiple 1 ns MD simulations were performed for acridine orange at the interface between three different acetonitrile/water mixtures (0/100, 20/80, and 50/50) with C8 and C18 alkyl chains. The diffusion coefficient, D, of acridine orange in pure solvent was found to be 4 times smaller at the water/C18 interface (D = 0.022 x 10(-4) cm2/s) than in bulk water (D = 0.087 x 10(-4) cm2/s), in qualitative agreement with experiment. Rotational reorientation times were 20 and 700 ps, which also agree favorably with the measured time scales of 130 and 740 ps. Contrary to experiment, the simulations found that for increasing surface coverage, the diffusion coefficient for acridine decreased. Detailed analysis of the solvent structure showed that the transport properties of acridine were primarily governed by the solvent distribution above the functionalized surface. The solvent structure, in turn, was largely determined by the surface consisting of the silica layer, the alkyl chains, and their functionalization.  相似文献   

14.
Gas transport of carbon dioxide in poly[bisphenol A carbonate-co-4,4'-(3,3,5-trimethylcyclohexylidene)diphenol carbonate] films over a wide range of pressure is described. The interpretation of the experimental results in terms of the dual mode model allowed the evaluation of the parameters of the model that govern the gas permeation process. The value of the diffusion coefficient obtained for carbon dioxide at zero concentration was 2.4 x 10(-8) cm(2) s(-1), at 303 K. This parameter was also measured by using pulsed field gradient NMR finding that its value reaches a nearly constant value of (2.7 +/- 0.9) x 10(-8) cm(2) s(-1), at 298 K, for diffusion times greater than 20 ms. Both the diffusion and solubility coefficients were also computed by using simulation methods based on the transition states theory and the Widom method, respectively. The value obtained for the diffusion coefficient was 1.8 x 10(-8) cm(2) s(-1), at 303 K, which compares very favorably with the experimental measurements. The drop of the simulated solubility coefficient with increasing pressure is sharper than that of the experimental one, at low pressures, and similar, at high pressures.  相似文献   

15.
Quasielastic neutron scattering has been used to study proton dynamics in the system lithium-ammonia at concentrations of 0, 4, 12, and 20 mole percent metal (MPM) in both the liquid and solid (expanded metal) phases. At 230 K, in the homogenous liquid state, we find that the proton self-diffusion coefficient first increases with metal concentration, from 5.6x10(-5) cm2 s(-1) in pure ammonia to 7.8x10(-5) cm2 s(-1) at 12 MPM. At higher concentrations we note a small decrease to a value of 7.0x10(-5) cm2 s(-1) at 20 MPM (saturation). These results are consistent with NMR data, and can be explained in terms of the competing influences of the electron and ion solvation. At saturation, the solution freezes to form a series of expanded metal compounds of composition Li(NH3)4. Above the melting point, at 100 K, we are able to fit our data to a jump-diffusion model, with a mean jump length (l) of 2.1 A and residence time (tau) of 3.1 ps. This model gives a diffusion coefficient of 2.3x10(-5) cm2 s(-1). In solid phase I (cubic, stable from 88.8 to 82.2 K) we find that the protons are still undergoing this jump diffusion, with l=2.0 A and tau=3.9 ps giving a diffusion coefficient of 1.8x10(-5) cm2 s(-1). Such motion gives way to purely localized rotation in solid phases IIa (from 82.2 to 69 K) and IIb (stable from 69 to 25 K). We find rotational correlation times (tau(rot)) of the order of 2.0 and 7.3 ps in phases IIa and IIb, respectively. These values can be compared with a rotational mode in solid ammonia with tau(rot) approximately 2.4 ps at 150 K.  相似文献   

16.
The effects of annexin A5 on the lateral diffusion of single-molecule lipids and single-molecule proteins were studied in an artificial lipid bilayer membrane. Annexin A5 is a member of the annexin superfamily, which binds preferentially to anionic phospholipids in a Ca2+-dependent manner. In this report, we were able to directly monitor single BODIPY 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine (DHPE) and ryanodine receptor type 2 (RyR2) labeled with Cy5 molecules in lipid bilayers containing phosphatidylserine (PS) by using fluorescence microscopy. The diffusion coefficients were calculated at various annexin A5 concentrations. The diffusion coefficients of BODIPY-DHPE and Cy5-RyR2 in the absence of annexin A5 were 4.81 x 10(-8) cm(2)/s and 2.13 x 10(-8) cm(2)/s, respectively. In the presence of 1 microM annexin A5, the diffusion coefficients of BODIPY-DHPE and Cy5-RyR2 were 2.2 x 10(-10) cm(2)/s and 9.5 x 10(-11) cm(2)/s, respectively. Overall, 1 microM of annexin A5 was sufficient to induce a 200-fold decrease in the lateral diffusion coefficient. Additionally, we performed electrophysiological examinations and determined that annexin A5 has little effect on the function of RyR2. This means that annexin A5 can be used to immobilize RyR2 in a lipid bilayer when imaging and analyzing RyR2.  相似文献   

17.
Li self-diffusion in rhombohedral Li7BiO6, being a promising basic material for cathodes of rechargeable ion batteries, is studied by means of 7Li stimulated echo NMR. Using the pulse sequence introduced by Jeener and Broekaert, a spin-alignment echo is created whose amplitude decay is recorded as a function of mixing time. The so-obtained two-time correlation functions follow stretched exponential behavior and lead to decay rates which can be identified directly with microscopic Li motional correlation rates (tau(-1)). Using a jump distance of about 0.2 nm, this results in a diffusion coefficient (D) of about 0.5 x 10(-16) m(2) s(-1) at 294 K. The activation energy turned out to be 0.53(3) eV which is in very good agreement with recently obtained results by means of dc-conductivity measurements probing long-range diffusion parameters. This shows that stimulated echo NMR, due to its inherent time scale, gives microscopic access to long-range transport. The prefactor tau(0)(-1) of the corresponding Arrhenius law lies in the typical range of phonon frequencies, tau(0)(-1) = 3 x 10(12) s(-1).  相似文献   

18.
We report the cyclic voltammetry, chronoamperometry, and scanning electrochemical microscopy of ferrocene dissolved in deep eutectic solvents (DES), consisting of choline chloride (ChCl) and either trifluoroacetamide (TFA) or malonic acid as the hydrogen-bond donor. Despite the use of ultramicroelectrodes, which were required due to the modest conductivities of the DES employed, linear diffusion behavior was observed in cyclic voltammetric experiments. The high viscosity of 1:2 ChCl/TFA relative to non-aqueous electrochemical solvents leads to a low diffusion coefficient, 2.7 x 10(-8) cm2 s(-1) for ferrocene in this medium. Because of the difficulties in achieving steady-state conditions, SECM approach curves were tip velocity dependent. Under certain conditions, SECM approach curves to an insulating substrate displayed a positive-feedback response. Satisfactory simulation of this unexpected behavior was obtained by including convection terms into the mass transport equations typically used for SECM theory. The observance of positive-feedback behavior at an insulating substrate can be described in terms of a dimensionless parameter, the Peclet number, which is the ratio of the convective and diffusive timescales. Fitting insulator approach curves of ferrocene in 1:2 ChCl/TFA shows an apparent increase in the diffusion coefficient with increasing tip velocity, which can be explained by DES behaving as a shear thinning non-Newtonian fluid.  相似文献   

19.
The methods have been developed for studying oxygen mobility by donor quenching in solutions with uniform concentration and in geminate pairs in a solid phase. It is shown that the kinetics of luminescence variations with time is described by a diffusion model. Oxygen mobility has been studied at low temperatures (77 K) in hard polymer matrices. squalane. glasses of low-molecular hydrocarbons and alcohols. The methods can be used to measure very low oxygen mobility with a diffusion coefficient of about 10(-23) cm2 s(-1).  相似文献   

20.
The translational diffusion coefficient of an integral membrane protein/surfactant complex has been measured using a novel pulsed field gradient NMR method. In this new approach, the information about the localization of the molecules is temporarily stored in the form of longitudinal magnetization of isotopes with long spin-lattice relaxation times. This allows one to increase the duration of the diffusion interval by about 1 order of magnitude. Unlike standard proton NMR methods using pulsed field gradients and stimulated echoes, the new method can be applied to macromolecular assemblies with diffusion coefficients well below 10(-10) m(2) s(-1), corresponding to masses in excess of 25 kDa in aqueous solution at room temperature. The method was illustrated by application to a water-soluble complex of tOmpA, the hydrophobic transmembrane domain of bacterial outer membrane protein A, with the detergent octyl-tetraoxyethylene (C(8)E(4); overall mass of complex approximately 45 kDa). The diffusion coefficient was found to be D = (4.99 +/- 0.07) x 10(-11) m(2) s(-1), consistent with measurements by size exclusion chromatography and by ultracentrifugation. The method has also been applied to a solution of recombinant human tRNA(3)(Lys), which has a molecular mass of 24 kDa, and the diffusion coefficient D = (1.05 +/- 0.015) x 10(-10) m(2) s(-1).  相似文献   

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