Folding of a supramolecular framework based on a tetrametallic clip driven by π-π interactions

Supramolecular extended frameworks based on a rotational molecular clip and having the same "primary structure" can exhibit either an unfolded or a folded framework. This process is driven by intramolecular π-π interactions, resulting in the formation of an infinite π-stacked column within the folded supramolecular framework.     

Encapsulation effect of π-conjugated quaterthiophene on the radial breathing and tangential modes of semiconducting and metallic single-walled carbon nanotubes

We developed a hybrid approach, combining the density functional theory, molecular mechanics, bond polarizability model and the spectral moment's method to compute the nonresonant Raman spectra of a single quaterthiophene (4T) molecule encapsulated into a single-walled carbon nanotube (metallic or semiconducting). We reported the optimal tube diameter allowing the 4T encapsulation. The influence of the encapsulation on the Raman modes of the 4T molecule and those of the nanotube (radial breathing modes and tangential modes) are analyzed. An eventual charge transfer between the 4T oligomer and the nanotube is discussed.     

Complexation of monosubstituted benzenes and methanes by cyclotetrachromotropylene in aqueous solution: Substituent effects on π-π and Ch-π interactions

The stability constantsK of 11 complexes formed in aqueous solution between several monosubstituted benzenes (C₆H₅X) and methanes (CH₃X) as guests and cyclotetrachromotropylene as host were determined by proton NMR spectroscopy. Variations ofK with the substituent X are attributed to the electronic effect of X and the presence of C–H or aromatic bonds, if any, interacting with the host bonds.     

Relative substituent position on the strength of π-π stacking interactions

It was observed that the relative position of the arene substituents has a profound influence on the strength of π-π stacking in the 9-benzyl-substituted triptycene system. A new series of model compounds (3a-i) capable of revealing quantitatively π-π stacking interactions was studied. This series of compounds (3a-i) has an ortho-substituted methyl group in one of the two interacting arenes and the syn/anti ratios were determined and compared to a series previously studied compounds (4a-i) that have a para methyl group on the corresponding arene. A greater than 50% increase in the strength of π-π stacking interactions was observed with the methyl group in the ortho position comparing to that in the para position. No difference in π-π stacking interactions was observed when the other aromatic ring was a pentafluorobenzoate group.     

pH-responsive assembly and disassembly of a supramolecular cryptand-based pseudorotaxane driven by π-π stacking interaction

Driven by π-π stacking interaction, a supramolecular cryptand-based [2]pseudorotaxane was formed and its formation was demonstrated to be pH-responsive.     

Dispersion of single-walled carbon nanotubes in dimethylacetamide and a dimethylacetamide–cholic acid mixture

A way of dispersing single-walled carbon nanotubes in preparing stable suspensions with high concentrations of individual nanotubes in amide solvents is described. The obtained suspensions are studied via Raman spectroscopy. The dependence of the degree of single-walled carbon nanotube (SWNT) dispersion in individual and mixed amide solvents on the type of solvent, the mass of nanotubes, and the concentration of cholic acid is established. A technique for processing spectral data to estimate the diameters and chiralities of individual nanotubes in suspension is described in detail.     

Energies of π*- and π-states of the conduction band and valence band of chiral carbon nanotubes

Nanotubes (NTs) are mainly represented by (n,p) chiral NTs with chirality indices 0 < p < n delimited by (n,0) and (n,n) for achiral NTs. In (n,p) chiral NTs, the unit cell hexagons have a helical arrangement on the cylindrical surface of an NT and common angular and axial translations. An analytical formula was derived for calculation of the band structure of both chiral and achiral NTs with chirality indices 0 ≤ p ≤ n and band diagrams of some chiral NTs. Chiral NTs significantly extend the range of semiconducting NTs. An equation for the band gap width ΔЕ of semiconducting chiral and achiral NTs was derived: \(\frac{{\vartriangle E}}{{{\gamma _0}}} = \frac{{2\pi }}{{\sqrt {3{n^2} + 3np + 3{p^2}} }}\). Tables of the band structure parameters of metallic and semiconducting chiral NTs are presented.     

Construction of oriented π-electron arrays based on two-dimensional supramolecular organizates

Two-dimensional supramolecular organizates are shown to be powerful tools for constructing oriented π-electron arrays, which are applicable to molecular photonics devices and artificial photosynthesis. Complementary hydrogen bonding at the interface of an amphiphilic nucleobase monolayer can form two-dimensional stacking of base-pairs, which is expected to be an electron medium for photoinduced electron transfer as well as double-strand DNAs. DNAs are also immobilized as a monomolecular film of the polyion-complex with an amphiphilic cationic intercalator. A new type of monolayer-forming stilbene amphiphile having a trinitrofluorenylidene group is prepared for designing spatially separated electron donor and acceptor layers.     

Comparable charge transport property based on S…S interactions with that of π-π stacking in a bis-fused tetrathiafulvalene compound

Compact molecular packing with short π-π stacking and large π-overlap in organic semiconductors is desirable for efficient charge transport and high carrier mobility.Thus charge transport anisotropy along different directions is commonly observed in organic semiconductors.Interestingly,in this article,we found that comparable charge transport property were achieved based on the single crystals of a bis-fused tetrathiafulvalene derivative(EM-TTP) compound along two interaction directions,that is,the multiple strong S…S intermolecular interactions and the π-π stacking direction,with the measured electrical conductivity and hole mobility of 0.4 S cm~(-1),0.94 cm~2 V~(-1) s~(-1) and 0.2 S cm~(-1),0.65 cm2 V~(-1) s~(-1),respectively.This finding provides us a new molecular design concept for developing novel organic semiconductors with isotropic charge transport property through the synergistic effect of multiple intermolecular interactions(such as S…S interactions) and π-π stacking.     

Amino acid analogues bind to carbon nanotube via π-π interactions: comparison of molecular mechanical and quantum mechanical calculations

Understanding the interaction between carbon nanotubes (CNTs) and biomolecules is essential to the CNT-based nanotechnology and biotechnology. Some recent experiments have suggested that the π-π stacking interactions between protein's aromatic residues and CNTs might play a key role in their binding, which raises interest in large scale modeling of protein-CNT complexes and associated π-π interactions at atomic detail. However, there is concern on the accuracy of classical fixed-charge molecular force fields due to their classical treatments and lack of polarizability. Here, we study the binding of three aromatic residue analogues (mimicking phenylalanine, tyrosine, and tryptophan) and benzene to a single-walled CNT, and compare the molecular mechanical (MM) calculations using three popular fixed-charge force fields (OPLSAA, AMBER, and CHARMM), with quantum mechanical (QM) calculations using the density-functional tight-binding method with the inclusion of dispersion correction (DFTB-D). Two typical configurations commonly found in π-π interactions are used, one with the aromatic rings parallel to the CNT surface (flat), and the other perpendicular (edge). Our calculations reveal that compared to the QM results the MM approaches can appropriately reproduce the strength of π-π interactions for both configurations, and more importantly, the energy difference between them, indicating that the various contributions to π-π interactions have been implicitly included in the van der Waals parameters of the standard MM force fields. Meanwhile, these MM models are less accurate in predicting the exact structural binding patterns (matching surface), meaning there are still rooms to be improved. In addition, we have provided a comprehensive and reliable QM picture for the π-π interactions of aromatic molecules with CNTs in gas phase, which might be used as a benchmark for future force field developments.     

Transparent conductors from carbon nanotubes LBL-assembled with polymer dopant with π-π electron transfer

Single-walled carbon nanotube (SWNT) and other carbon-based coatings are being considered as replacements for indium tin oxide (ITO). The problems of transparent conductors (TCs) coatings from SWNT and similar materials include poor mechanical properties, high roughness, low temperature resilience, and fast loss of conductivity. The simultaneous realization of these desirable characteristics can be achieved using high structural control of layer-by-layer (LBL) deposition, which is demonstrated by the assembly of hydroethyl cellulose (HOCS) and sulfonated polyetheretherketone (SPEEK)-SWNTs. A new type of SWNT doping based on electron transfer from valence bands of nanotubes to unoccupied levels of SPEEK through π-π interactions was identified for this system. It leads to a conductivity of 1.1 × 10(5) S/m at 66 wt % loadings of SWNT. This is better than other polymer/SWNT composites and translates into surface conductivity of 920 Ω/? and transmittance of 86.7% at 550 nm. The prepared LBL films also revealed unusually high temperature resilience up to 500 °C, and low roughness of 3.5 nm (ITO glass -2.4 nm). Tensile modulus, ultimate strength, and toughness of such coatings are 13 ± 2 GPa, 366 ± 35 MPa, and 8 ± 3 kJ/m(3), respectively, and exceed corresponding parameters of all similar TCs. The cumulative figure of merit, ∏(TC), which included the critical failure strain relevant for flexible electronics, was ∏(TC) = 0.022 and should be compared to ∏(TC) = 0.006 for commercial ITO. Further optimization is possible using stratified nanoscale coatings and improved doping from the macromolecular LBL components.     

First homo- and hetero-nuclear complexes of a chemical messenger-histamine: Cu(II) complex being a supramolecular assembly based on hydrogen bond, Ni(II)?π and C-H?π non-covalent interactions

In this study, the first homo- and hetero-nuclear cyanocomplexes of histamine (His), namely, [Cu(His)₂][Ni(CN)₄], [Ni(His)₂Ni(CN)₄]_n and [Cd(His)Ni(CN)₄]_n are investigated by X-ray diffraction (XRD) technique, electron paramagnetic resonance (EPR) and infrared (IR) spectroscopy. Besides being the first hetero-nuclear complex of histamine, [Cu(His)₂][Ni(CN)₄] complex has an interesting property as being a supramolecular structure constructed by three different non-covalent interactions as hydrogen bond, Ni(II)?π and C-H?π interactions. In [Cu(His)₂][Ni(CN)₄] complex histamine exists in gauche conformation and N^τ-H tautomeric form, and plays an important role in supramolecular structure formation by participating in non-covalent interactions through its aminoethyl side chain and imidazole group. The shifts and splittings in the stretching vibrations of cyano groups show that [Ni(His)₂Ni(CN)₄]_n and [Cd(His)Ni(CN)₄]_n complexes are one-dimensional and three-dimensional coordination polymers, respectively. In [Ni(His)₂Ni(CN)₄]_n complex, histamine acts as a chelating ligand by adopting gauche conformation. In [Cd(His)Ni(CN)₄]_n complex, Cd(II) ions and [Ni(CN)₄]²⁻ anions form two-dimensional layered structure and histamine has a novel bonding mode as a bridging ligand between these layered structures. It is concluded that histamine may have trans conformation and Nπ-H tautomer as a bridging ligand in [Cd(His)Ni(CN)₄]_n complex, which has not been reported so far for the solid structures of bidentate histamine. EPR studies on [Cu(His)₂][Ni(CN)₄] and Cu²⁺-doped [Cd(His)Ni(CN)₄]_n complexes show that the ground state of the unpaired electron in both complexes is dominantly d_x²-y².     

Interplay between halogen bonds and π-π stacking interactions: CSD search and theoretical study

According to our survey of the Cambridge Structural Database (CSD), a great number of crystal structures, in which halogen bonds and aromatic stacking interactions are present and play an important role in crystal packing, have been extracted. In this work, ab initio calculations at the MP2 level of theory were performed to investigate the mutual influence between halogen bonds and π-π stacking interactions. Different energetic effects are observed in the studied complexes where the two kinds of noncovalent interactions coexist, which can be rationalized by the direction of charge transfer for the two interactions. These effects have been analyzed in detail in terms of the structural, energetic, and charge transfer properties of the complexes. In addition, the quantum theory of atoms in molecules (QTAIM) was also employed to characterize the interactions and to examine the strengthening or weakening of the interactions, depending on the variations of electron density on the bond and cage critical points. Finally, certain crystal structures retrieved from the CSD have been selected to provide experimental evidence of the combination of the two interactions.     

Selective stabilization of self-assembled hydrogen-bonded molecular capsules through π-π interactions

Subtle noncovalent forces such as π-π interactions play an import role in the folding of biological macromolecules such as DNA and proteins. We describe here a system where such interactions on the outside of a molecular capsule trigger a selective change of its structure as a self-assembled receptor.     

New triorganotin(IV) complexes of polyfunctional S,N,O-ligands: Supramolecular structures based on π?π and/or C-H?π interactions

A series of new triorganotin(IV) complexes with 4-hydroxy-2-mercapto-6-methylpyrimidine (L¹H₂), 4-hydroxy-2-mercapto-pyrimidine (L²H₂), 2,4(1H,3H)-pyrimidinedithione (L³H₂) (Scheme 1) of the type R₃SnLSnR₃ (R = Me 1, 4, 7; R = Ph 2, 5, 8; R = PhCH₂3, 6, 9) have been synthesized by reactions of triorganotin(IV) chloride and corresponding ligands. All complexes are characterized by elemental analyses, IR spectra and NMR spectra analyses. Among them, complexes 2, 5 and 8 are also characterized by X-ray crystallography diffraction analyses. Significant π?π stacking, C-H?π interactions and intramolecular hydrogen bonds stabilize these structures.     

Electronic coupling through intramolecular π-π interactions in biscobaltocenes: a structural, spectroscopic, and magnetic study

The paramagnetic dinuclear complexes 1,8-bis(cobaltocenyl)naphthalene (2) and 1,8-bis[(pentamethyl-η(5)-cyclopentadienyl)(η(5)-cyclopentadiendiyl)cobalt(II)]naphthalene (4) were synthesized. The molecular structures were characterized by X-ray structure analysis and consisted of two cobaltocenes linked through a distorted naphthalene clamp. Electronic interactions between the two cobalt atoms were observed by cyclic voltammetric studies. Superconducting quantum interference device (SQUID) measurements of the pure compounds and diluted in their diamagnetic iron derivatives, as well as variable-temperature NMR spectroscopy experiments in solution are presented. Magnetic measurements revealed an antiferromagnetic coupling of the electrons in complexes 2 and 4. From NMR spectroscopy experiments, Curie behavior in the temperature range from -60 to +60 °C can be deduced. The electronic structure and magnetic behavior is supported by results of broken-symmetry DFT and multireference calculations along with UV/Vis spectroscopic data, which revealed an intramolecular through space π-π interaction between the cobaltocene units.     

A simple chiral recognition system to investigate substituent effects on π-π interactions

We have used a simple molecular recognition system to study substituent effects in aromatic interactions. A series of substituted benzoylleucine diethyl amides with aromatic rings of varying electronic character were crystallized. All of the substituted dimers organized into homochiral dimers in the solid state but with pronounced differences in regard to the orientation of the aromatic rings with respect to each other. However, no homochiral dimerization was observed in the unsubstituted case.     

Amperometric NADH sensor based on a carbon ceramic electrode modified with the natural carotenoid crocin and multi-walled carbon nanotubes

A carbon ceramic electrode (CCE) was fabricated from a composite consisting of sol-gel, ceramic graphite, multi-walled carbon nanotubes and the natural carotenoid crocin. The resulting sensor is shown to allow for the determination of NADH at a rather low working potential of 0.22 V (vs. Ag/AgCl). The heterogeneous electron transfer rate constant (k_s) and the surface coverage of the modified electrode are 16.8 s^?1 and 22 pmol·cm^?2, respectively. The sensor shows excellent and linear response in solutions of pH 7.0 over the 0.5 to 100 μM NADH concentration range, a 0.1 μM detection limit, and a sensitivity of 251.3 nA·μM^?1·cm^?2.

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Graphical abstract Schematic of the preparation of a carbon ceramic electrode modified with electropolymerized crocin on multi-walled carbon nanotubes. This sensor has a strongly decreased oxidation overpotential for NADH.