Novel chiral imidazole cyclophane receptors: synthesis and enantioselective recognition for amino acid derivatives

Novel chiral imidazole cyclophane receptors were synthesized by highly selective N-alkylation of the imadazolyl 1N-position of the bridged histidine diester 2 with the dibromide in the presence of NaH; these receptors exhibit good chiral recognition toward the enantiomers of L- and D-amino acid derivatives (up to KD/KL = 3.52, delta delta G0 = -3.11 kJ mol-1) in CHCl3 at 25.0 degrees C.     

Amino acid ester salt recognition by ferrocene-based ditopic receptor bearing oligoethylene glycol with pendant bipy subunits: CV, UV-vis and ESR studies

The novel ferrocene-based ditopic receptor 1 was synthesized. This receptor bears two oligoethylene glycol arms with pendant 2,2'-bipyridine unit at the identical cyclopentadienyl rings, Cu(I) cation binds to 1 to form the 1 : 1 complex (1.Cu(I)) with the cavity consisting of polyether, and the resulting complex acts as a receptor for amino acid ester salts to give the ditopic complex (1.Cu(I).AAOMe-HCl). The 1H NMR spectrum of 1.Cu(I).LeuOMe-HCl exhibits strong broadening at the bipyridine region, and the ESR spectrum of the same sample gives the signals assigned as Cu(II) species. With these data, the binding of 1.Cu(I) towards AAOMe.HCl leads to the conformational change, and the Cu(I) complex is simultaneously oxidized to the Cu(II) complex.     

Silicon‐modified surfactants and wetting: II. Temperature‐dependent spreading behaviour of oligoethylene glycol derivatives of heptamethyltrisiloxane

The temperature‐dependent spreading performance of defined trisiloxane surfactants of the general formula [(CH₃)₃SiO]₂CH₃Si‐­(CH₂)₃(OCH₂CH₂)_3–9OCH₃ and Silwet L77 on a trimethylsilylated silicon‐wafer surface has been investigated. At 6 °C the tetraethylene glycol derivative showed the highest initial spreading rate. At 40 °C the octaethylene glycol derivative was the fastest spreader. It is shown that spreading behaviour and phase behaviour are closely related. The highest initial spreading rates were found for solutions in the two‐phase state (2Φ) closely above the liquid–liquid insolubility boundary. Copyright © 1999 John Wiley & Sons, Ltd.     

Novel solid-state polymer electrolyte consisting of a porous layer-by-layer polyelectrolyte thin film and oligoethylene glycol

A novel solid-state polymer electrolyte was constructed using layer-by-layer (LbL) polyelectrolyte assembly of linear poly(ethylenimine) (LPEI) and poly(acrylic acid) (PAA), combined with a plasticization step using oligoethylene glycol dicarboxylic acid (OEGDA). This composite film exhibits a relatively high ionic conductivity of 9.5 x 10(-5) S/cm at 25 degrees C and 22% relative humidity. Detailed characterization of the composite was undertaken using grazing-angle Fourier transform infrared (GA-FTIR), atomic force microscopy (AFM), scanning electron microscopy (SEM), differential scanning calorimetry (DSC), and impedance spectroscopy. After immersing the LPEI/PAA films into OEGDA aqueous solutions, the films exhibited a swelling behavior and increased surface roughness indicative of porosity induced by reorganization of ionic interactions between LPEI and PAA in acidic solution. This internal porous structure allows inclusion of OEGDA within the multilayer and increased ionic conductivity under ambient conditions due to the combined effects of plasticization of the LbL matrix by atmospheric water as well as the added mobility of ions in molten OEGDA within the composite.     

Molecular recognition of anions through hydrogen bonding stabilization of anion-ionophore adducts: a novel trifluoroacetophenone-based binding motif

[reaction: see text] A novel trifluoroacetophenone-based binding motif has been developed that recognizes anions such as carboxylates through reversible formation of anion-ionophore adducts that are stabilized by intramolecular H-bonding. The intramolecular H-bonding resulted in more than 10-fold enhancement in the binding affinity and an enthalpy gain (DeltaH degrees ) of 3.0 kcal/mol for the binding of an acetate ion when compared to the case without the intramolecular H-bonding.     

Triggering a [2]rotaxane molecular shuttle through hydrogen sulfide

A novel chemically-controlled [2]rotaxane molecular shuttle was successfully designed and synthesized. A H₂S-responsive bulk barrier was introduced between the two identical recognition stations of the [2]rotaxane to prevent dynamic shuttling of the macrocycle. Upon addition of H₂S, the complete intramolecular cascade reaction occurs in a controllable manner, resulting in removal of the bulk barrier and the shuttling motion of the macrocycle between the two stations recovers.     

Anion recognition and cation-induced molecular motion in a heteroditopic [2]rotaxane

A heteroditopic [2]rotaxane consisting of a calix[4]diquinone–isophthalamide macrocycle and 3,5‐bis‐amide pyridinium axle components with the capability of switching between two positional isomers in response to barium cation recognition is synthesised. The anion binding properties of the rotaxane’s interlocked cavity together with Na⁺, K⁺, NH₄⁺ and Ba²⁺ cation recognition capabilities are elucidated by ¹H NMR and UV‐visible spectroscopic titration experiments. Upon binding of Ba²⁺, molecular displacement of the axle’s positively charged pyridinium group from the rotaxane’s macrocyclic cavity occurs, whereas the monovalent cations Na⁺, K⁺ and NH₄⁺ are bound without causing significant co‐conformational change. The barium cation induced shuttling motion can be reversed on addition of tetrabutylammonium sulfate.     

Bipyridyl- and biphenyl-DNA: a recognition motif based on interstrand aromatic stacking

The synthesis and incorporation into oligonucleotides of C-nucleosides containing the two aromatic, non-hydrogen-bonding nucleobase substitutes biphenyl (I) and bipyridyl (Y) are described. Their homo- and hetero-recognition properties in different sequential arrangements were then investigated via UV-melting curve analysis, gel mobility assays, CD- and NMR spectroscopy. An NMR analysis of a dodecamer duplex containing one biphenyl pair in the center, as well as CD data on duplexes with multiple insertions provide further evidence for the zipper-like interstrand stacking motif that we proposed earlier based on molecular modeling. UV-thermal melting experiments with duplexes containing one to up to seven I- or Y base pairs revealed a constant increase in T(m) in the case of I and a constant decrease for Y. Mixed I/Y base pairs lead to stabilities in between the homoseries. Insertion of alternating I/abasic site- or Y/abasic site pairs strongly decreases the thermal stability of duplexes. Asymmetric distribution of I- or Y residues on either strand of the duplex were also investigated in this context. Duplexes with three natural base pairs at both ends and 50 % of I pairs in the center are still readily formed, while duplexes with blunt ended I pairs tend to aggregate unspecifically. Duplexes with one natural overhang at the end of a I-I base pair tract can both aggregate or form ordered duplexes, depending on the nature of the natural bases in the overhang.     

Synthesis of a [2]rotaxane through first- and second-sphere coordination

In an effort to expand the application of a new template from interpenetrated to interlocked molecular species, we report the synthesis of a new [2]rotaxane by means of both first- and second-sphere coordination of a palladium(II) dichloride subunit.     

New dicationic derivatives of dibenzotetraaza[14]annulene: tuning DNA-binding properties

Four new water-soluble derivatives of dibenzotetraaza[14]annulene have been synthesized, bearing meso substituents with different structures and dimensions: 3-(N,N,N-trimethylammonium)propyl, 3-(N-pyridinium-1-yl)propyl, 2-[3-(N,N,N-trimethylammonium)propoxy]benzoyl, and 2-[3-(N-pyridinium-1-yl)propoxy]benzoyl. The crystal structures of 3-(trimethylammonium)propyl and (N,N,N-trimethylammonium)propoxy]benzoyl derivatives were determined by single crystal X-ray analysis. According to the UV-vis titrations, thermal denaturation experiments, and ethidium bromide displacement assays, all compounds presented here interact strongly with double stranded (ct)-DNA. The product equipped with 3-(trimethylammonium)propyl pendant groups and two positive charges interacts with DNA in one dominant binding mode, whereas the other three derivatives revealed more complex mixed-type interactions. The results have been discussed in terms of dimensions, geometry, and electronic properties of the evaluated compounds, on the basis of corresponding crystallographic data.     

Progress in the optimization of chiral cyclophane synthetic receptors for shape selective molecular recognition in aqueous media through hydrophobic association

Three new synthetic receptors based on Tr?ger’s base are prepared and evaluated. These three receptors are structural isomers of a successful receptor reported earlier from this laboratory, and they are all far inferior to that original receptor. Two of these receptors fail almost entirely and do so for an interesting reason. In water (not in other solvents) they collapse, forming a deflated structure. Collapsed or “sicklied” receptors do not bind to alicyclic or hydrophobic substrates in water because an important component of the driving force, the high energy waters solvating the interior of the macrocyclic structure, is lost when the receptor collapses. The results clearly illustrate how important it is to use computational methods that include good aqueous solvation models when designing new cyclophane receptors.     

Organocatalysis of nucleophilic substitution reactions by the combined effects of two promoters fused in a molecule: oligoethylene glycol substituted imidazolium salts

Oligoethylene glycol substituted imidazolium salts were synthesized as promoters for a range of S_N2 reactions, and their efficiency was examined. These tailor-made organic promoters enhanced the nucleophilicity of alkali metal salts significantly through the combined effects of two promoters (oligoethylene glycols and imidazolium salts) in a single molecule. The effects of the oligoethylene glycol side chain length, ionic liquid anions, nucleophiles, and substrates were investigated systematically. [hexaEGmim][OMs] and [dihexaEGim][OMs] showed the highest efficiency for S_N2 reactions using alkali metal salts. The role of the terminal hydroxyl groups of the oligoethylene glycol moiety was assessed by examining the relative S_N2 yields of chlorination and bromination. The results showed that the hydrogen bonding strength of the hydroxyl groups with the nucleophile is very important. The mechanism for the excellent promotion of S_N2 reactions by oligoEGILs was examined by quantum chemical calculations. The results showed that the oxygen atoms in the oligoethylene glycol portion and the ionic liquid anion act on the counter cation K⁺ or Na⁺ as a Lewis base, to enhance the reactivity of the metal salts significantly.     

Host-[2]rotaxane: advantage of converging functional groups for guest recognition

A host-[2]rotaxane was constructed by converting a diaminophenylcalix[4]arene into a [2]rotaxane using the DCC-rotaxane method (Zehnder, D.; Smithrud, D. B. Org. Lett. 2001, 16, 2485-2486). N-Ac-Arg groups were attached to the dibenzo-24-crown-8 ring of the rotaxane to provide a convergent functional group. To demonstrate the advantage provided by the rotaxane architecture for recognition of guests that contain a variety of functional groups, association constants (K(A)) for N-Ac-Trp, indole, N-Ac-Gly, fluorescein, 1-(dimethylamino)-5-naphthalenesulfonate, and pyrene bound to the [2]rotaxane were determined by performing (1)H NMR and fluorescence spectroscopic experiments. The host-[2]rotaxane had the highest affinity for fluorescein with a K(A) = 4.6 x 10(6) M(-)(1) in a 98/2 buffer (1 mM phosphate, pH 7)/DMSO solution. A comparison of K(A) values demonstrates that both the aromatic pocket and ring of the host-[2]rotaxane contribute binding free energy for complexation. Association constants were also derived for the same guests bound to the diaminophenylcalix[4]arene and to a diphenylcalix[4]arene that contained arginine residues displayed in a nonconvergent fashion. The host-[2]rotaxane provides higher affinity and specificity for most guests than the host with divergent N-Ac-Arg groups of the one that only has an aromatic pocket. For example, the K(A) for the complex of the host-[2]rotaxane and fluorescein in the DMSO/water mixture is more than 2 orders of magnitude greater than association constants derived for the other hosts.     

A cyclam core dendrimer containing dansyl and oligoethylene glycol chains in the branches: protonation and metal coordination

We have synthesized a dendrimer (1) consisting of a 1,4,8,11-tetraazacyclotetradecane (cyclam) core, appended with four benzyl substituents that carry, in the 3- and 5-positions, a dansyl amide derivative (of type 2), in which the amide hydrogen is replaced by a benzyl unit that carries an oligoethylene glycol chain in the 3- and 5-positions. All together, the dendrimer contains 16 potentially luminescent moieties (eight dansyl- and eight dimethoxybenzene-type units) and three distinct types of multivalent sites that, in principle, can be protonated or coordinated to metal ions (the cyclam nitrogen atoms, the amine moieties of the eight dansyl units, and the 16 oligoethylene glycol chains). We have studied the absorption and luminescence properties of 1, 2, and 3 in acetonitrile and the changes taking place upon titration with acid and a variety of divalent (Co2+, Ni2+, Cu2+, Zn2+), and trivalent (Nd3+, Eu3+, Gd3+) metal ions as triflate and/or nitrate salts. The results obtained show that: 1) double protonation of the cyclam ring takes place before protonation of the dansyl units; 2) the oligoethylene glycol chains do not interfere with protonation of the cyclam core and the dansyl units in the ground state, but affect the luminescence of the protonated dansyl units; 3) the first equivalent of metal ion is coordinated by the cyclam core; 4) the interaction of the resulting cyclam complex with the appended dansyl units depends on the nature of the metal ion; 5) coordination of metal ions by the dansyl units follows at high metal-ion concentrations; 6) the effect of the metal ion depends on the nature of the counterion. This example demonstrates that dendrimers may exhibit complete functionality resulting from the integration of the specific properties of their component units.     

Fluorous glycol derivatives: novel carbonyl protective groups

Fluorous glycol derivatives 5 were prepared and evaluated as reagents for the protection of carbonyl groups for use in fluorous synthesis. The acetals formed from fluorous diol 5b (Rf=n-C₈F₁₇) with carbonyl compounds can be separated and purified by simple fluorous-organic extraction.     

Protecting a squaraine near-IR dye through its incorporation in a slippage-derived [2]rotaxane

The photophysical properties and chemical stability of a squaraine derivative were enhanced after using Na+ ions to template a high-yield slippage synthesis of a [2]rotaxane from the dye and a molecular cage.     

Imidazole derivatives: a comprehensive survey of their recognition properties

Due to its amphoteric nature the imidazole ring can function as selective and effective anion and/or cation and even neutral organic molecules receptor system. As a result, the design of new multichannel imidazole-based receptors capable of recognizing different types of analytes is strongly demanded. This review summarizes the most recent and relevant advances in this area.     

Synthesis of a novel poly(ethylene glycol) grafted triethylamine functionalized dicationic ionic liquid and its application in one-pot synthesis of 2-amino-2-chromene derivatives in water

A novel poly(ethylene glycol) grafted triethylamine functionalized dicationic ionic liquid has been prepared and characterized. It was successfully used as an efficient catalyst for the three-component synthesis of 2-amino-2-chromene derivatives in water. The simple workup, mild reaction conditions, wide substrate flexibility, excellent yields, and environmental friendliness are notable advantages of this protocol. In addition, the catalyst could be reused several times without appreciable reduction of catalytic activity.     

A mechanical "flip-switch". Interconversion between co-conformations of a [2]rotaxane with a single recognition site

[2]Rotaxanes utilising the 1,2-bis(pyridinium)ethane, 24-crown-8 motif can exist in two distinct co-conformations whose relative abundances are solvent dependent.