Ionic immobilization, diversification, and release: application to the generation of a library of methionine aminopeptidase inhibitors

Development of an ionic immobilization, diversification, and release method for the generation of methionine aminopeptidase inhibitors is reported. This method involves the immobilization of 5-bromofuran-2-carboxylic acid and 5-bromothiophene-2-carboxylic acid onto PS-BEMP, followed by Suzuki reaction on a resin-bound intermediate and subsequent release to provide products in moderate yields and excellent purities. Compound potencies were evaluated on the Co(II), Mn(II), Ni(II), and Fe(II) forms of Escherichia coli MetAP1. The furoic-acid analogs were found to be Mn(II) selective with IC 50 values in the low micromolar range. Qualitative SAR analysis, supplemented by molecular modeling studies, provides valuable information on structural elements responsible for potency and selectivity.     

Polynuclear complexes of the pendent-arm ligand 1,4,7-tris(acetophenoneoxime)-1,4,7-triazacyclononane

The ligand 1,4,7-tris(acetophenoneoxime)-1,4,7-triazacyclononane (H(3)L) has been synthesized and its coordination properties toward Cu(II), Ni(II), Co(II), and Mn(II) in the presence of air have been investigated. Copper(II) yields a mononuclear complex, [Cu(H(2)L)](ClO(4)) (1), cobalt(II) and manganese(II) ions yield mixed-valence Co(III)(2)Co(II) (2a) and Mn(II)(2)Mn(III) (4) complexes, whereas nickel(II) produces a tetranuclear [Ni(4)(HL)(3)](2+) (3) complex. The complexes have been structurally, magnetochemically, and spectroscopically characterized. Complex 3, a planar trigonal-shaped tetranuclear Ni(II) species, exhibits irregular spin-ladder. Variable-temperature (2-290 K) magnetic susceptibility analysis of 3 demonstrates antiferromagnetic exchange interactions (J = -13.4 cm(-1)) between the neighboring Ni(II) ions, which lead to the ground-state S(t) = 2.0 owing to the topology of the spin-carriers in 3. A bulk ferromaganetic interaction (J = +2 cm(-1)) is prevailing between the neighboring high-spin Mn(II) and high-spin Mn(III) ions leading to a ground state of S(t) = 7.0 for 4. The large ground-state spin value of S(t) = 7.0 has been confirmed by magnetization measurements at applied magnetic fields of 1, 4 and 7 T. A bridging monomethyl carbonato ligand formation occurs through an efficient CO(2) uptake from air in methanolic solutions containing a base in the case of complex 4.     

Monomeric, trimeric, and tetrameric transition metal complexes (Mn, Fe, Co) containing N,N-bis(2-pyridylmethyl)-2-aminoethanol/-ate: preparation, crystal structure, molecular magnetism and oxidation catalysis

The reaction of N,N-bis(2-pyridylmethyl)-2-aminoethanol (bpaeOH), NaSCN/NaN(3), and metal (M) ions [M = Mn(II), Fe(II/III), Co(II)] in MeOH, leads to the isolation of a series of monomeric, trimeric, and tetrameric metal complexes, namely [Mn(bpaeOH)(NCS)(2)] (1), [Mn(bpaeO)(N(3))(2)] (2), [Fe(bpaeOH)(NCS)(2)] (3), [Fe(4)(bpaeO)(2)(CH(3)O)(2)(N(3))(8)] (4), [Co(bpaeOH)(NCS)(2)] (5), and [Co(3)(bpaeO)(2)(NO(3))(N(3))(4)](NO(3)) (6). These compounds have been investigated by single crystal X-ray diffractometry and magnetochemistry. In complex 1 the Mn(II) is bonded to one bpaeOH and two thiocyanate ions, while in complex 2 it is coordinated to a deprotonated bpaeO(-) and two azide ions. The oxidation states of manganese ions are 2+ for 1 and 3+ for 2, respectively, indicating that the different oxidation states depend on the type of binding anions. The structures of monomeric iron(II) and cobalt(II) complexes 3 and 5 with two thiocyanate ions are isomorphous to that of 1. Compounds 1, 2, 3, and 5 exhibit high-spin states in the temperature range 5 to 300 K. 4 contains two different iron(III) ions in an asymmetric unit, one is coordinated to a deprotonated bpaeO(-), an azide ion, and a methoxy group, and the other is bonded to three azide ions and two oxygens from bpaeO(-) and a methoxy group. Two independent iron(III) ions in 4 form a tetranuclear complex by symmetry. 4 displays both ferromagnetic and antiferromagnetic couplings (J = 9.8 and -14.3 cm(-1)) between the iron(III) ions. 6 is a mixed-valence trinuclear cobalt complex, which is formulated as Co(III)(S = 0)-Co(II)(S = 3/2)-Co(III)(S = 0). The effective magnetic moment at room temperature corresponds to the high-spin cobalt(II) ion (～4.27 μ(B)). Interestingly, 6 showed efficient catalytic activities toward various olefins and alcohols with modest to excellent yields, and it has been proposed that a high-valent Co(V)-oxo species might be responsible for oxygen atom transfer in the olefin epoxidation and alcohol oxidation reactions.     

Normal pulse polarographic study on the effect of hydrolysis at an electrode, and the Mn(II)-catalysed reduction of nitrate and nitrite

In neutral unbuffered solutions containing dissolved oxygen, the normal pulse polarograms of certain metal ions [Pb(II), Cd(II), Zn(II), Co(II) and Mn(II)] produce peaks on the limiting plateaux. These peaks reflect the reduction of hydroxide species formed in the vicinity of the electrode. It has been found that Mn(OH)(2) formed at the electrode surface exerts a catalytic effect on the reduction of nitrate and nitrite ions, with formation of OH(-).     

Use of Escherichia coli immobilized on amberlite XAD-4 as a solid-phase extractor for metal preconcentration and determination by atomic absorption spectrometry.

A sensitive solid-phase extraction technique (SPE) for the enrichment of Fe(III), Co(II), Mn(II) and Cr(III) prior to atomic absorption spectrometric analysis is described. Escherichia coli immobilized on Amberlite XAD-4 was used as a solid-phase extractor. The effects of the pH, amount of solid-phase, eluent type and volume of the sample solution on the recovery of the metal ions were investigated. The effect of diverse ions was also investigated. The recoveries of Fe(III), Co(II), Mn(II) and Cr(III) under the optimum conditions were found to be 99 +/- 2, 99 +/- 3, 98 +/- 2, 98 +/- 3%, respectively, at the 95% confidence level. The detection limits of the metal ions were found as to be 2.4, 3.8, 1.3 and 1.7 ng ml(-1) for Fe(II), Co(II), Mn(II) and Cr(III) respectively, by applying a preconcentration factor of 25. The proposed enrichment method was applied to the determination of analytes in Atatürk Dam water samples, and alloy samples (RSD < 5%). The accuracy of the method was verified on certified alloy samples (NBS SRM 85b and NBS SRM 59a). The analytes were determined with a relative error lower than 5% in water and alloy samples.     

A new chemiluminescence system for determination of cobalt

The chemiluminescence of the reaction of tartaric acid with hydrogen peroxide in the presence of Co(II) in alkaline buffer media has been examined. The maximum emission wavelength is 460 nm. The kinetic curve of the chemiluminescence system has been modelled with a computer, and the reaction conditions have been optimized. Foreign ions, such as Fe(II), Cr(III) and Mn(II), interfere when present in more than 10-fold ratio to Co(II), but several ions can be tolerated when present in higher ratios to Co(II). The concentration range of linear response is from 3.5 x 10(-9) to 2.0 x 10(-6) g/ml, and the detection limit is 4 x 10(-11) g/ml. The procedure has been satisfactorily applied to determine trace cobalt in human blood serum.     

Synthesis and characterization of some pyrimidine, purine, amino acid and mixed ligand complexes

Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) complexes of barbital, thiouracil, adenine, amino acids (methionine, lysine and alanine) and some mixed ligands were prepared and characterized by elemental analyses, IR, electronic spectra, magnetic susceptibility and ESR spectra. Coordination of the metallic centre to the oxygen and nitrogen atoms of barbital, thiouracil, amino acids and coordinate to amino group and nitrogen atom of adenine occurred. Electronic spectra and magnetic susceptibility measurements were utilized to infer the structure of the complexes which are octahedral for Mn(II), Fe(III), Co(II), Ni(II) and Cd(II) and tetrahedral for Mn(II), Cu(II), Zn(II) complexes. ESR spectra were observed for copper complexes with a d(x2)-(y2) ground state with small g(||) values indicating strong interaction between the ligands and their metal ions.     

On the mechanism of electroreduction of sulphur-containing ligands induced by the electroreduction of transition metal cations

The large scale electrolysis of Zn(II), Cd(II), Hg(II), Cu(II), Ni(II), Co(II), Co(III), Fe(II), Mn(II), Cr(II), Cr(III), Bi(III), In(III) and Sb(III) at mercury electrodes in presence of mercaptoacetic acid, 3-mercaptopropionic acid, cysteine and thiourea was carried out and the products were investigated. In case of transition metal ions the catalytic reduction of organic compounds resulting in the formation of sulphide ions was found. There are two possible ways of the production of these ions: (i) consisting in the formation of a complex between transition metal ion and organic ligand which is subsequently, reduced, and (ii) direct electroreduction of organic compound on the electrode modifiied by the deposition of metal and metal sulphide. For both cases the mechanism of electroreduction was discussed.     

Dynamic adsorption and desorption of heavy metal ions on poly(acrylaminophosphonic-carboxyl-hydrazide) chelating fiber

The dynamic adsorption and desorption properties, including the effect of pH value and flow rate on the adsorption, eluent acidity and volume, eluting velocity and re-use, of Cu(II), Pb(II), Zn(II), Cd(II), Mn(II), Ni(II), Co(II) and Hg(II) ions on the column loaded with poly(acrylaminophosphonic-carboxyl-hydrazide) chelating fiber were investigated. The recovery of Mn(II), Co(II), Cd(II), Ni(II) and Zn(II) ions in the presence of Na, K, Ca and Mg ions was examined. The preconcentration of trace amounts of Mn(II), Co(II), Cd(II), Ni(II) and Zn(II) ions from model solution samples was carried out with satisfactory results. The amount of the metal ions detected after preconcentration and recovery by this technique was basically in agreement with the added amount. The method is rapid, precise and simple. Received: 15 October 1997 / Revised: 17 March 1998 / Accepted: 20 March 1998     

Dynamic adsorption and desorption of heavy metal ions on poly(acrylaminophosphonic-carboxyl-hydrazide) chelating fiber

The dynamic adsorption and desorption properties, including the effect of pH value and flow rate on the adsorption, eluent acidity and volume, eluting velocity and re-use, of Cu(II), Pb(II), Zn(II), Cd(II), Mn(II), Ni(II), Co(II) and Hg(II) ions on the column loaded with poly(acrylaminophosphonic-carboxyl-hydrazide) chelating fiber were investigated. The recovery of Mn(II), Co(II), Cd(II), Ni(II) and Zn(II) ions in the presence of Na, K, Ca and Mg ions was examined. The preconcentration of trace amounts of Mn(II), Co(II), Cd(II), Ni(II) and Zn(II) ions from model solution samples was carried out with satisfactory results. The amount of the metal ions detected after preconcentration and recovery by this technique was basically in agreement with the added amount. The method is rapid, precise and simple. Received: 15 October 1997 / Revised: 17 March 1998 / Accepted: 20 March 1998     

Metal-binding properties of an Hpn-like histidine-rich protein

The Hpn-like protein (Hpnl), a histidine- and glutamine-rich protein, is critical for Helicobacter pylori colonization in human gastric muscosa. In this study, the thermodynamic properties of Ni(II), Cu(II), Co(II), and Zn(II) toward Hpnl were studied by isothermal titration calorimetry (ITC). We found that Hpnl exhibits two independent binding sites for Ni(II) as opposed to one site for Cu(II), Co(II), and Zn(II). Protease digestion and chemical denaturation analysis further revealed that Ni(II) confers a higher stability upon Hpnl than other divalent metal ions. The potential Ni(II) binding sites are localized in the His-rich domain of Hpnl as confirmed by mutagenesis in combination with modification of histidine residues of the protein. We also demonstrated that the single mutants (H29A and H31A) and tetrameric mutant (H29-32A) cut nearly half of the binding capacity of Hpnl towards nickel ions, whereas other histidine residues (His30, 32, 38, 39, 40, and 41) are nonessential for nickel coordination. Escherichia coli cells that harbored H29A, H31A, and H29-32A mutant genes exhibited less tolerance toward high concentrations of extracellular nickel ions than those with the wild-type gene. Our combined data indicated that the conserved histidine residues, His29 and His31 in the His-rich domain of Hpnl, are critical for nickel binding, and such a binding is important for Hpnl protein to fulfill its biological functions.     

THE EFFECT OF OXYGEN ON THE INCORPORATION OF MANGANESE,IRON AND COBALT INTO HEMATOPORPHYRIN IX IN GLACIAL ACETIC ACID

Abstract

The results of polarography studies for the reaction of hematoporphyrin IX with Mn(II), Fe(II) and Co(II) ion in acetic acid in the absence and the presence of oxygen are reported. The metal incorporation reaction in the presence of oxygen is quantitative for Mn and Co and incomplete for Fe. In the absence of oxygen, the Mn reaction does not proceed at all, whereas, both the Fe and Co reactions are quantitative.     

Electronic structure study of seven-coordinate first-row transition metal complexes derived from 1,10-diaza-15-crown-5: a successful marriage of theory with experiment

A detailed study of the electronic structure of seven-coordinate Mn(II), Co(II), and Ni(II) complexes with the lariat ether N,N'-bis(2-aminobenzyl)-1,10-diaza-15-crown-5 (L(1)) is presented. These complexes represent new examples of structurally characterized seven-coordinate (pentagonal bipyramidal) complexes for the Mn(II), Co(II), and Ni(II) ions. The X-ray crystal structures of the Mn(II) and Co(II) complexes show C(2) symmetries for the [M(L(1))](2+) cations, whereas the structures of the Ni(II) complexes show a more distorted coordination environment. The magnetic properties of the Mn(II) complex display a characteristic Curie law, whereas those of the Co(II) and Ni(II) ions show the occurrence of zero-field splitting of the S = 3/2 and 1 ground states, respectively. Geometry optimizations of the [M(L(1))](2+) systems (M = Mn, Co, or Ni) at the DFT (B3LYP) level of theory provide theoretical structures in good agreement with the experimental data. Electronic structure calculations predict a similar ordering of the metal-based beta spin frontier MO for the Mn(II) and Co(II) complexes. This particular ordering of the frontier MO leads to a pseudodegenerate ground state for the d(8) Ni(II) ion. The distortion of the C(2) symmetry in [Ni(L(1))](2+) is consistent with a Jahn-Teller effect that removes this pseudodegeneracy. Our electronic structure calculations predict that the binding strength of L(1) should follow the trend Co(II) approximately Mn(II) > Ni(II), in agreement with experimental data obtained from spectrophotometric titrations.     

Structure and magnetic properties of layered high-spin Co(II)(l-threonine)2(H2O)2

We report the structure and the magnetic properties of a cobalt(II) compound with the amino acid l-threonine, Co(C(4)H(8)NO(3))(2)(H(2)O)(2). It crystallizes in the orthorhombic chiral space group C222(1), with a = 5.843(5) A, b = 10.120(10) A, c = 22.36(3) A, and Z = 4. The Co(II) ion is in a deformed octahedral environment on a 2-fold symmetry axis parallel to the crystallographic axis b. It is bonded to two threonine molecules in a bidentate fashion, via one oxygen from the carboxylate end and the alpha-amino nitrogen. A water molecule occupies the third independent site. The Co(II) ions are arranged in layers with intralayer and interlayer distances of 5.84 and 11.18 A, respectively. Magnetic measurements data reflect the molecular character of a compound with weak exchange interactions. EPR measurements in polycrystalline and single-crystal samples indicate a distorted axial symmetry around the Co(II) ion, as expected from the structural results. Eigenvalues and eigenvectors of the g tensor are determined. The measured principal g values (5.81, 4.56, and 2.23) reflect a high-spin Co(II) ion, as suggested by the type of ligands and the molecular symmetry. From the incomplete collapse of the hyperfine structure we estimate 0.25 < |J| < 1.2 cm(-1) between neighboring Co(II) ions within a layer, transmitted through H-bonds. A higher limit |J'| < 0.07 cm(-1) is estimated for the exchange interactions between Co(II) ions in neighboring layers. From a global fit of a spin Hamiltonian with spin (3)/(2) to magnetization and EPR data we obtain a zero field splitting delta approximately 231 cm(-1) between the two lowest doublet states. The results are discussed in terms of the molecular and electronic structure of the compound.     

Transition Metal Complexes of an Antipyrine Derivative

The stepwise formation constants of N-antipyrinyl-N′-3-phenyl-2-propenoyl-thiourea (I) complexes with metal ions of the first transition series, Cu(II), Ni(II), Co(II), Mn(II) and Zn(II) have been determined in 70% (V/V) ethanol-water medium. The formation constants for the chelates follow the Irving-Williams series: Zn(II)<Cu(II)>Ni(II)>Co(II)>Mn(II) The effect of ionic radius and electronegativity on the chelate formation are discussed. Complexes of Cu(II) and Ni(II) have been synthesised and characterised by elemental analysis, electrolytic conductance, IR spectra and magnetic susceptibility measurements. The ligand forms bis-complexes with Cu(II) and Ni(II). The binding sites are oxygen and sulphur atoms.     

Evaluation of the toluene-3,4-dithiol (TDT)-trioctylamine (TOA) synergic extraction system

Synergic extraction of different essential and toxic metal ions such as Mn(II), Co(II), Zn(II), Hg(II), Cd(II) and Se(IV) has been carried out using toluene-3,4-dithiol (TDT) and trioctylamine (TOA) in chloroform. A strong synergic effect in the extraction of Co(II), Mn(II) and Zn(II) has been observed. The effect of different anions on the extraction has also been analyzed. Ascorbate ions can easily separate Hg(II) and Se(IV) ions. The stability of synergic adduct and reaction mechanism are discussed.     

Asymmetric Schiff Base (N 2 O 3 ) Complexes as Ligands Towards Mn(II), Fe(III) and Co(II), Synthesis and Characterization

Heterobi- and tri-nuclear complexes [LMM'Cl] and [(LM) 2 M'](M=Ni or Cu and M'=Mn, Fe or Co) have been synthesised. The heteronuclear complexes were prepared by stepwise reactions using two mononuclear Ni(II) and Cu(II) complexes of the general formula [HLM]·1/2H 2 O, as ligands towards the metal ions, Mn(II), Fe(III) and Co(II). The asymmetrical pentadentate (N 2 O 3 ) Schiff-base ligands used were prepared by condensing acetoacetylphenol and ethylenediamine, molar ratio 1 1, to yield a half-unit compound which was further condensed with either salicylaldehyde or naphthaldehyde to yield the ligands H 3 L 1 and H 3 L 2 which possess two dissimilar coordination sites, an inner four-coordinate N 2 O 2 donor set and an outer three-coordinated O 2 O set. 1 H NMR and IR spectra indicate that the Ni(II) and Cu(II) ions are bonded to the inner N 2 O 2 sites of the ligands leaving their outer O 2 O sites vacant for further coordination. Different types of products were obtained according to the type of metal ion. These products differ in stoichiometry according to the type of ligand in the parent compound. Electronic spectra and magnetic moments indicate that the structures of the parent Ni(II) and Cu(II) complexes are square-planar while the geometry around Fe(III), Mn(II) and Co(II) in their products are octahedral as elucidated from IR, UV-visible, ESR, 1 H NMR, mass spectrometry and magnetic moments.     

1,1'-二(N-水杨酰腙乙基 )二茂铁及其过渡金属(Ⅱ)的配合物

本文合成了1,1'-二(N-水杨酰腙乙基)二茂铁及其过渡金属配合物,ML.nH~2O[M=Mn(II)、Co(II)、Ni(II)、Cu(II)、Zn(II)和Cd(II)],并用元素分析、UV、IR、^1HNMR、TG-DTA和摩尔电导进行了表征.配体以烯醇式以通过亚胺基氮原子和酰胺基氧负离子与金属离子配位,按摩尔比1:1结合.Ni(II)配合物有一分子DMF配位.大部分配合物比配体热稳定性高.     

Spectroscopic and Molecular Docking Studies of Cu(II), Ni(II), Co(II), and Mn(II) Complexes with Anticonvulsant Therapeutic Agent Gabapentin

New Cu(II), Ni(II), Co(II), and Mn(II) complexes of the gabapentin (Gpn) bidentate drug ligand were synthesized and studied using elemental analyses, melting temperatures, molar conductivity, UV–Vis, magnetic measurements, FTIR, and surface morphology (scanning (SEM) and transmission (TEM) electron microscopes).The gabapentin ligand was shown to form monobasic metal:ligand (1:1) stoichiometry complexes with the metal ions Cu(II), Ni(II), Co(II), and Mn(II). Molar conductance measurements in dimethyl-sulfoxide solvent with a concentration of 10⁻³ M correlated to a non-electrolytic character for all of the produced complexes. A deformed octahedral environment was proposed for all metal complexes. Through the nitrogen atom of the –NH₂ group and the oxygen atom of the carboxylate group, the Gpn drug chelated as a bidentate ligand toward the Mn²⁺, Co²⁺, Ni²⁺, and Cu²⁺ metal ions. This coordination behavior was validated by spectroscopic, magnetic, and electronic spectra using the formulas of the [M(Gpn)(H₂O)₃(Cl)]·nH₂O complexes (where n = 2–6).Transmission electron microscopy was used to examine the nanostructure of the produced gabapentin complexes. Molecular docking was utilized to investigate the comparative interaction between the Gpn drug and its four metal [Cu(II), Ni(II), Co(II), and Mn(II)] complexes as ligands using serotonin (6BQH) and dopamine (6CM4) receptors. AutoDock Vina results were further refined through molecular dynamics simulation, and molecular processes for receptor–ligand interactions were also studied. The B3LYP level of theory and LanL2DZ basis set was used for DFT (density functional theory) studies. The optimized geometries, along with the MEP map and HOMO → LUMO of the metal complexes, were studied.     

Identification of potential inhibitors of human methionine aminopeptidase (type II) for cancer therapy: Structure-based virtual screening,ADMET prediction and molecular dynamics studies

Methionine Aminopeptidases MetAPs are divalent-cofactor dependent enzymes that are responsible for the cleavage of the initiator Methionine from the nascent polypeptides. MetAPs are classified into two isoforms: namely, MetAP1 and MetAP2. Several studies have revealed that MetAP2 is upregulated in various cancers, and its inhibition has shown to suppress abnormal or excessive blood vessel formation and tumor growth in model organisms. Clinical studies show that the natural product fumagillin, and its analogs are potential inhibitors of MetAP2. However, due to their poor pharmacokinetic properties and neurotoxicities in clinical studies, their further developments have received a great setback. Here, we apply structure-based virtual screening and molecular dynamics methods to identify a new class of potential inhibitors for MetAP2. We screened Otava’s Chemical Library, which consists of about 3 200 000 tangible-chemical compounds, and meticulously selected the top 10 of these compounds based on their inhibitory potentials against MetAP2. The top hit compounds subjected to ADMET predictor using 3 independent ADMET prediction programs, were found to be drug-like. To examine the stability of ligand binding mode, and efficacy, the unbound form of MetAP2, its complexes with fumagillin, spiroepoxytriazole, and the best promising compounds compound-3369841 and compound-3368818 were submitted to 100 ns molecular dynamics simulation. Like fumagillin, spiroepoxytriazole, and both compound-3369841 and compound-3368818 showed stable binding mode over time during the simulations. Taken together, these uninherited-fumagillin compounds may serve as new class of inhibitors or provide scaffolds for further optimization towards the design of more potent MetAP2 inhibitors -development of such inhibitors would be essential strategy against various cancer types.