Prediction of retention indexes. I. Structure-retention index relationship on apolar columns

A simple method is reported for predicting the retention index (RI) of a chemical compound from the number of carbon and carbon equivalent atoms in the molecule, the RI increment for atom addition and the group retention factors (GRFs) for substituents and functional groups. Atoms other than carbon such as oxygen, nitrogen, sulfur, chlorine, bromine and iodine are assigned carbon atom equivalency of approximately 1, 1, 2, 2, 3 and 4, respectively and are counted for their contribution towards RI prediction. The GRFs of substituents and functional groups are derived from the RIs of reference compounds and series of homologues. Ring structures, ring fusion, ring connection, iso- and neo-carbons, chain branching and unsaturation are also assigned GRFs. The predicted RIs of a number of alicyclic, aliphatic and aromatic hydrocarbons, primary, secondary and tertiary alcohols, phenols, aliphatic amines, aromatic amines, heterocyclics, carboxylic acids, acid esters, aldehydes, ketones, and halogenated compounds, are found to be within +/- 3% of the observed values. The structure-retention index relationship thus developed is extremely useful in the tentative identification of radioactive side products formed in tritium labeling by radiation-induced methods.     

Prediction of retention indexes. III. Silylated derivatives of polar compounds.

Polar compounds containing hydroxyl, amino and carboxyl groups, singly or in combination, can be chromatographed after the polar functional groups are silylated. The silylated derivatives of acids, alcohols, amines, diols, amino alcohols, amino acids are shown to behave chromatographically as hydrocarbons, and their retention indexes can be readily predicted from their base values. The column difference, namely, the difference between the retention indexes of the analyte on polar and non-polar columns is minimal for the silylated derivatives in comparison to that observed for the underivatized analytes. This minimal column difference is attributed to the hydrocarbon-like chromatographic characteristics of the silylated derivatives. The retention indexes of the silyl derivatives appear to correlate with the atom number Z of the analyte.     

Structure-retention index relationships for derivatized monosaccharides on non-polar gas chromatography columns.

A gas chromatographic method for predicting the retention index of a derivatized monosaccharide is presented. The procedures are especially useful to detect and predict minute quantities of sugars in biological or chemical samples. Monosaccharides are first converted to the alditols and then derivatized by acetylation, permethylation or silylation. The derivatized monosaccharide structure-retention index relationship that has been developed is useful in the identification of unknown monosaccharides that can be readily confirmed by gas chromatography-mass spectrometry.     

Prediction of retention indices. V. Influence of electronic effects and column polarity on retention index

The retention index increment for addition of a methylene group to an analyte molecule is shown for 1-halo-n-alkanes to be different from 100 i.u., a value that is customarily assigned according to the current convention in retention index prediction. In temperature-programmed gas chromatography using linearly interpolated retention index I, a linear regression equation, I=AZ+(GRF), with the number of atoms (Z) in the molecule as variable can describe the retention of 16 homologous series of organic compounds on non-polar and polar columns with characteristic A (linear regression coefficient) and (GRF) (group retention factor) values. A molecular model of retention on the basis of electron density and electron density distribution relative to that of n-alkane is proposed. This model brings out the inter- and intramolecular electronic effects in the analyte molecule and its dipole-dipole interaction with the stationary liquid phases, as variations in the A value. The (GRF) value varies with the connectivity ability of a functional group for extended conjugation, substitution, etc., but is most influenced by hydrogen bonding (H-bonding) with the stationary liquid phase. One can estimate the sequence of elution of a mixture of organic compounds from any two of the three parameters on the right-hand side of the above equation or retrieve the retention indexes of an entire homologous series from its A and (GRF) values. The fact that each analyte molecule has its own A value on different columns makes column difference (deltaI) compound-specific rather than column-specific, a departure from previous assumptions.     

Prediction of gas chromatographic retention indices of polychlorinated dibenzothiophenes on non-polar columns

Polychlorodibenzothiophenes (PCDTs) have been found in several kinds of environmental samples. The lack of reference compounds has meant that very little is known about their gas chromatographic behavior. Here we discuss the retention of 19 authentic PCDTs and their sulfones on the widely used gas chromatographic stationary phases DB-5 and DB-5ms. The retention order is different from that of the polychlorodibenzofurans. The data generated allowed us to carry out a multiple linear regression to generate parameters for predicting the retention indices of unknown congeners based only on their structural features.     

Prediction of programmed temperature retention times on linked capillary columns of different polarity

Systems formed by serial connection of capillary columns of different polarity were studied with methods previously used to predict the behavior of linked capillary columns under isothermal conditions and to obtain programmed temperature gas chromatography (PTGC) retention times of the individual columns starting from isothermal data. The two calculation methods were simultaneously applied in order to predict PTGC retention times of the series system starting from isothermal data obtained on the two individual columns. Experimental retention values measured using different temperature programs on the individual columns and on the series systems were found to agree with those calculated.     

应用人工神经网络预测多氯代二苯骈呋喃的色谱保留指数

以量子化学方法在密度泛函B3LYP/6-31G(d)水平上计算得到了多氯代二苯骈呋喃系列化合物(PCDF)分子的结构参数:最高占据轨道能(EHOMO)、最低空轨道能(ELUMO)、最正原子净电荷(q+)、最负原子净电荷(q-)、分子偶极矩(μ)、极化率(α)、分子平均体积(Vm)、恒容热容(C■V).采用误差反向传播(BP)算法的人工神经网络,建立了EHOMO、ELUMO、q+、q-、μ、α、Vm、C■V与PCDF色谱保留指数之间关系的模型,检测样本的预报值与实验值相对误差范围为-1.66%².39%,平均相对误差为0.31%,达到了很好的预测效果.     

Prediction of retention times in linear gradient temperature and pressure programmed analysis on capillary columns

The simultaneous temperature and inlet pressure programming (TPP) in gas chromatographic analysis decreases the retention time and the maximum value of temperature required for the elution of high boiling substances. Therefore, compounds sensitive to thermal degradation can be better analysed and column ageing is reduced. However, the empirical choice of proper analysis conditions requires many preliminary runs; this paper describes a procedure for the theoretical prediction of retention times in TPP using few preliminary runs carried out in isobaric and isothermal conditions. The used program permits the prediction of the retention times of the compounds analysed with any different TPP run carried out within the temperature and pressure ranges investigated with the preliminary runs. The influence of various analytical parameters on the accuracy of the prediction values was investigated. The proposed model also predicts the relative position in the chromatogram of closely eluting peaks and the possible coincidence of retention times or inversion of the elution order with changing temperature. It is also possible to foresee the analytical conditions, which offer a baseline separation of all of the peaks of the sample.     

Prediction of retention times and efficiency in linear gradient programmed pressure analysis on capillary columns

A method for the prediction of the retention time and the resolution of chromatographic peaks in different experimental conditions by starting from few experimental data measured in isothermal and isobaric analyses was published previously. In this paper, the same mathematical model was implemented for calculating the retention times and the column efficiency in programmed pressure runs. Some models originated from the Golay equation and reported in the literature are compared, and a new modified equation for the calculation of the peak width at half height is proposed. The procedure for the prediction of the retention time and the peak width at half height at programmed pressure of the carrier gas and different column temperature and linear gradient by using retention data of different compounds obtained in few isobaric runs is described. The prediction of the retention time and the separation efficiency of compounds with different polarity gave good results for the programmed pressure runs with linear gradient. The effect of the variation of the initial parameters of the experimental analyses and of the mathematical model on the accuracy of the prediction has been evaluated.     

Tandem LC columns for the simultaneous retention of polar and nonpolar molecules in comprehensive metabolomics analysis

The tandem use of hydrophilic interaction LC columns with RP columns in series configuration has resulted in the retention of both polar and nonpolar components in complex biological samples (mouse serum) in a single analysis. This approach successfully coupled various columns with orthogonal separation characteristics, employed a single solvent gradient program compatible with the two columns and used ESI coupled to a TOF mass spectrometer for detection. Ion suppression, a common problem in ESI, was virtually eliminated for components eluting with apparent capacity factors >0.7. Retention time reproducibility with the tandem columns performed over three days with over 100 injections was comparable to that observed for single columns alone. This method was applied to the analysis of a pooled mouse serum sample and afforded highly reproducible data for up to 3000 mass spectral features. This approach was implemented with a conventional LC–MS system and should find broad applicability in the comprehensive analysis of complex mixtures containing a wide range of compound polarities.     

Prediction of retention values in linear temperature programming of narrow and mega-bore capillary columns

Retention times in linear temperature programmed gas chromatography on narrow bore and megabore capillary columns have been calculated from experimental retention times measured at three isothermal temperatures: an iterative procedure performed by BASIC programs was used to obtain the values of the constants enabling the calculation of the programmed temperature retention times. Different methods of calculation have been compared.     

Separation of polar compounds using carbon columns

The objective of this review with 122 references is to provide structure and retention mechanisms of porous graphitic carbon by chromatographic analysis and computational chemical analysis of retention mechanisms. Synthesis methods of porous graphitic carbon are described. Applications for use as matrix for dynamic coating on porous graphitic carbon and direct separation of polar compounds on porous graphitic carbon demonstrated that the physical and chemical stability of graphitic carbons performed in both chromatography and extraction, especially for polar compounds, those are difficult on both silica-based and organic polymer-based packing materials. The disadvantage is difficult desorption of non-polar compounds adsorbed on the surface. The development of 3.5-microm particles improves the separation power of graphitic carbon columns with the high theoretical plate number.     

Aqueous normal-phase retention of nucleotides on silica hydride columns

The use of silica hydride-based stationary phases for the retention and analysis of nucleotides has been investigated. Both reversed-phase columns with a hydride surface underneath as well as those with an unmodified or a minimally modified hydride material were tested. With these systems, an aqueous normal-phase mode was used with high organic content mobile phases in combination with an additive to control pH for the retention of the hydrophilic nucleotides. Isocratic and gradient elution formats have been used to optimize separations for mixtures containing up to seven components. All conditions developed are suitable for methods that utilize mass spectrometry detection.     

Theoretical aspects of retention in overloaded columns

Issues regarding the concentration dependent solute distributions in overloaded chromatographic columns are discussed. Geometric simplicity of wall-coated capillary columns is taken as a reference and the discussion is developed using the example of the absorption isotherm of a solute having more affinity for itself than for the stationary phase. A retention function is deduced solving the equation of motion for the peak maximum, making some approximations. By means of this expression, the applicability of capillary gas chromatography (GC) as a technique for obtaining information on the sorption isotherm is analyzed.