Hydrogen-bond-induced quantum interference in single-molecule junctions of regioisomers

Solvents can play a significant role in tuning the electrical conductance of single-molecule junctions. In this respect, protic solvents offer the potential to form hydrogen bonds with molecular backbones and induce electrostatic gating via their dipole moments. Here we demonstrate that the effect of hydrogen bond formation on conductance depends on whether transport through the junction is controlled by destructive quantum interference (DQI) or constructive quantum interference (CQI). Furthermore, we show that a protic solvent can be used to switch the conductance of single-molecule junctions between the two forms of quantum interference. To explore this possibility, two regioisomers (BIT-Zwitterion and BIT-Neutral) were synthesized and their single-molecule conductances in aprotic and protic solvents were investigated using a scanning-tunneling-microscope-based break junction technique, combined with density functional theory and quantum transport theory. We find that the protic solvent twists the geometry of BIT-Zwitterion by introducing intermolecular hydrogen bonds between the solvent and target molecule. Moreover, it increases the energy gap between the highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) of the molecule by imposing different electrostatic gating on the delocalized HOMO and localized LUMO, leading to a lower conductance compared to that in aprotic solvent. In contrast, the conductance of BIT-Neutral increases due to a transformation from DQI to CQI originating from a change from a planar to a folded conformation in the protic solvent. In addition, the stacking between the two folded moieties produces an extra through-space transport path, which further contributes to conductance. This study demonstrates that combinations of protic solvents and regioisomers present a versatile route to controlling quantum interference and therefore single-molecule conductance, by enabling control of hydrogen bond formation, electrostatic gating and through-space transport.

We demonstrate that the effect of solvent–molecule interaction through hydrogen bonding on junction conductance depends on whether transport through the junction is controlled by destructive or constructive quantum interference.     

Molecular junctions based on SAMs of cruciform oligo(phenylene ethynylene)s

Cruciform oligo(phenylene ethynylene)s (OPEs) with an extended tetrathiafulvalene (TTF) donor moiety (OPE5-TTF and OPE3-TTF) and their simple analogues (OPE5-S and OPE3) without conjugated substituents were used to form high-quality self-assembled monolayers (SAMs) on ultraflat gold substrates. Molecular junctions based on these SAMs were investigated using conducting-probe atomic force microscopy (CP-AFM). The TTF substituent changes the molecular orbital energy levels and decreases the HOMO-LUMO energy gap, resulting in a 9-fold increase in conductance for both TTF cruciform OPEs compared to the unsubstituted analogues. The difference in electrical transport properties of the SAMs was reproduced by the theoretical transport calculations for the single molecules.     

Specific adsorption of iodide-ion at liquid (Ga-In)-electrode of eutectic composition from aqueous solutions with constant ionic strength

The adsorption behavior of iodide-ion at liquid (Ga-In)-electrode in aqueous electrolyte solutions at 305 K is studied by the electrochemical impedance spectroscopy, differential capacitance, and cyclic voltammetry. The equivalent circuit describing the experimental data in the presence and in the absence of the I⁻ ion is a series connection of a resistance and a capacitance that is frequency-independent over a ∼500 Hz to 100 kHz range. The experimental data were obtained by the mixed electrolyte method in electrolyte solutions acidified with HClO₄ down to pH 3, with excess of surface-inactive ion ClO₄⁻ and constant ionic strength (0.1 M). The analysis resulted in the determination of the charge σ₁ of the I⁻ ion specifically adsorbed at the liquid (Ga-In)-electrode at the adsorbate maximal concentration: σ_I = 7.73 μC/cm² in the case of analysis at σ = const (at the zero charge potential) or σ_I = 7.50 μC/cm² in the case of analysis at E = const. These values are characteristic of rather strong specific adsorption. The values of σ_I of the studied anion were used in the calculations of different isotherms with the purpose of the adsorption parameters determination. The obtained results were compared with literature data determined on other metals in the presence of specifically adsorbable I⁻ ion.     

Quantum tunneling and quantum phase interference in a [Mn(II)2Mn(III)2] single-molecule magnet

[Mn4(hmp)6(H2O)2(NO3)2](NO3)2.2.5H2O (1) has been synthesized from the reaction of 2-hydroxymethylpyridine (Hhmp) with Mn(NO3)2.4H2O in the presence of tetraethylammonium hydroxide. 1 crystallizes in the triclinic P space group with two crystallographically independent centrosymmetrical [Mn4(hmp)6(H2O)2(NO3)2]2+ complexes in the packing structure. Four Mn ions are arranged in a double-cuboidal fashion where outer Mn2+ are heptacoordinated and inner Mn3+ are hexacoordinated. dc magnetic measurements show that both Mn2+...Mn3+ and Mn3+...Mn3+ interactions are ferromagnetic with J(wb)/k(B) = +0.80(5) K, and J(bb)/k(B) = +7.1(1) K, respectively, leading to an S(T) = 9 ground state. Combined ac and dc measurements reveal the single-molecule magnet (SMM) behavior of 1 with both thermally activated and ground-state tunneling regimes, including quantum phase interference. In the thermally activated regime, the characteristic relaxation time (tau) of the system follows an Arrhenius law with tau0 = 6.7 x 10(-)(9) s and delta(eff)/k(B) = 20.9 K. Below 0.34 K, tau saturates indicating that the quantum tunneling of the magnetization becomes the dominant relaxation process as expected for SMMs. Down to 0.04 K, field dependence of the magnetization measured using the mu-SQUID technique shows the presence of very weak inter-SMM interactions (zJ'/k(B) approximately -1.5 x 10(-3) K) and allows an estimation of D/k(B) at -0.35 K. Quantum phase interference has been used to confirm the D value and to estimate the transverse anisotropic parameter to E/k(B) = +0.083 K and the ground-state tunnel splitting delta(LZ) = 3 x 10(-7) K at H(trans) = 0 Oe. These results rationalize the observed tunneling time (tau(QTM)) and the effective energy barrier (delta(eff)).     

Self-assembled monolayers (SAMs) with photo-functionalities

Self-assembled monolayers (SAMs) of alkylthiol on metals, especially on gold, with photo-functionalities, such as photo-induced electron transfer, control of photo-electrochemical properties, control of electron transfer by photoisomerization, luminescence, and photo-patterning, are reviewed.     

The impedance of liquid (Ga-In)-electrode of eutectic composition in aqueous electrolyte solutions in the absence and in the presence of surface-active ions

Adsorption behavior of anions at liquid (Ga-In)-electrode at a temperature of 305 K is studied by electrochemical impedance spectroscopy and cyclic voltammetry. The above-listed methods allowed evaluating the adsorbability of different ions. Equivalent circuit describing the experimental data in the presence and in the absence of ions Br⁻ and Cl⁻ is a contour comprising a resistance connected in series to a capacitance whose value remains constant over the frequency range from ∼300 Hz to 10 kHz. Analysis of the experimental data obtained by the mixed electrolyte method with excess of surface-inactive ion Cl and constant ionic strength 0.1 M in electrolyte solutions acidified down to pH 3 gave the charge of specifically adsorbed ions Br⁻ and Cl⁻ (σ₁) at the liquid (Ga-In)-electrode surface as 5.24 and 1.67 μC/cm², respectively, at the adsorbate maximal concentration and zero-charge potential. These values are characteristic of very weak specific adsorption. The σ₁ values found for the (Ga-In)-electrode were used in the calculations of different isotherms, aiming at the determination of adsorption parameters. The results of the study were compared with literature data obtained by different researchers for different metals in the presence of specifically adsorbing bromide and chloride ions.     

Reaction of Disodium Ethene-1,1-bis(thiolates) with Dibromobutanes

Russian Journal of Organic Chemistry - Previously unknown 2-(1,3-dithiolan-2-ylidene)malononitrile, 2-cyano-2-(1,3-dithiolan-2-ylidene)­acetamides, and methyl...     

Effect of quantum interference on tunneling photoionization rates of N2 and O2 molecules

In this work, we reexamine the photoionization rates of N(2) and O(2) molecules using the previously published photoionization rate theory which is based on the original atomic Keldysh theory [K. Mishima et al., Phys. Rev. A 66, 033401 (2002); ibid.66, 053408 (2002)]. We have found that the constructive quantum interference takes place for N(2) molecule while the destructive quantum interference plays an important role for O(2) molecule. This is consistent with the experimental and theoretical results reported in the literature. The formulas derived in this paper clearly show that this is due to the different symmetries of the valence orbitals of N(2) and O(2) molecules.     

Reaction of Disodium Ethene-1,1-bis(thiolates) with 1,1,2-Trichloroethane

Russian Journal of Organic Chemistry - Previously unknown chloro-substituted 1,3-dithiolanes were synthesized by reaction of disodium 2-cyanoethene-1,1-bis(dithiolates) with 1,1,2-trichloroethane....     

Geometry for self-assembling of spherical hydrocarbon cages with methane thiolates on au(111)

An organodisulfide with a pair of adamantane moieties was synthesized, and its self-assembled monolayer (SAM) was formed on Au(111). The adamantane moieties are almost spherical and much bulkier than alkyl chains. The structure was characterized by scanning tunneling microscopy. Two-dimensional crystals of the SAM were found to be four orientationally different hexagonals with almost the same lattice constant with 4 radical 3a/3 and 7a/3 (a = 0.2884 nm, the Au lattice constant). The structure is assigned to four of the high-order commensurate adlayers. The present study of geometry and energetics for self-assembling of such an organosulfur compound with spherical cages provides a new insight into the probable SAM structure of various thiolate derivatives on Au(111).     

Length-dependent transport in molecular junctions based on SAMs of alkanethiols and alkanedithiols: effect of metal work function and applied bias on tunneling efficiency and contact resistance

Nanoscopic tunnel junctions were formed by contacting Au-, Pt-, or Ag-coated atomic force microscopy (AFM) tips to self-assembled monolayers (SAMs) of alkanethiol or alkanedithiol molecules on polycrystalline Au, Pt, or Ag substrates. Current-voltage traces exhibited sigmoidal behavior and an exponential attenuation with molecular length, characteristic of nonresonant tunneling. The length-dependent decay parameter, beta, was found to be approximately 1.1 per carbon atom (C(-1)) or 0.88 A(-)(1) and was independent of applied bias (over a voltage range of +/-1.5 V) and electrode work function. In contrast, the contact resistance, R(0), extrapolated from resistance versus molecular length plots showed a notable decrease with both applied bias and increasing electrode work function. The doubly bound alkanedithiol junctions were observed to have a contact resistance approximately 1 to 2 orders of magnitude lower than the singly bound alkanethiol junctions. However, both alkanethiol and dithiol junctions exhibited the same length dependence (beta value). The resistance versus length data were also used to calculate transmission values for each type of contact (e.g., Au-S-C, Au/CH(3), etc.) and the transmission per C-C bond (T(C)(-)()(C)).     

Ion recognition properties of self-assembled monolayers (SAMs)

In the search for new sensors, self-assembled monolayers (SAMs) have gained intensive interest due to their nanometre size, highly-ordered structures, and molecular recognition properties. This article presents an overview of ion recognition at SAM-modified surface/solution interfaces, and brings up to date the most notable examples for the sensing of cations and anions. Sensing is achieved with SAMs containing redox active and inactive receptors using techniques such as fluorescence spectroscopy, cyclic voltammetry and electrochemical impedance spectroscopy.     

A novel Ni(4) complex exhibiting microsecond quantum tunneling of the magnetization

A highly asymmetric Ni(II) cluster [Ni(4)(OH)(OMe)(3)(Hphpz)(4)(MeOH)(3)](MeOH) (1) (H(2)phpz=3-methyl-5-(2-hydroxyphenyl)pyrazole) has been prepared and its structure determined by means of single-crystal X-ray diffraction by using synchrotron radiation. Variable-temperature bulk-magnetization measurements show that the complex exhibits intramolecular-ferromagnetic interactions leading to a spin ground state S=4 with close-lying excited states. Magnetization and high-frequency EPR measurements suggest the presence of sizable Ising-type magnetic anisotropy, with zero-field splitting parameters D=-0.263 cm(-1) and E=0.04 cm(-1) for the spin ground state, and an isotropic g value of 2.25. The presence of both axial and transverse anisotropy was confirmed through low-temperature specific heat determinations down to 300 mK, but no slow relaxation of the magnetization was observed by AC measurements down to 1.8 K. Interestingly, AC susceptibility measurements down to temperatures as low as 23 mK showed no indication of slow relaxation of the magnetization in 1. Thus, despite the presence of an anisotropy barrier (U approximately 4.21 cm(-1) for the purely axial limit), the magnetization relaxation remains extremely fast down to the lowest temperatures. The estimated quantum tunneling rate, Gamma>0.667 MHz, makes this complex a prime candidate for observation of coherent tunneling of the magnetization.     

Mechanism of rectification in tunneling junctions based on molecules with asymmetric potential drops

This paper proposes a mechanism for the rectification of current by self-assembled monolayers (SAMs) of alkanethiolates with Fc head groups (SC(11)Fc) in SAM-based tunneling junctions with ultra-flat Ag bottom electrodes and liquid metal (Ga(2)O(3)/EGaIn) top electrodes. A systematic physical-organic study based on statistically large numbers of data (N = 300-1000) reached the conclusion that only one energetically accessible molecular orbital (the HOMO of the Fc) is necessary to obtain large rectification ratios R ≈ 1.0 × 10(2) (R = |J(-V)|/|J(V)| at ±1 V). Values of R are log-normally distributed, with a log-standard deviation of 3.0. The HOMO level has to be positioned spatially asymmetrically inside the junctions (in these experiments, in contact with the Ga(2)O(3)/EGaIn top electrode, and separated from the Ag electrode by the SC(11) moiety) and energetically below the Fermi levels of both electrodes to achieve rectification. The HOMO follows the potential of the Fermi level of the Ga(2)O(3)/EGaIn electrode; it overlaps energetically with both Fermi levels of the electrodes only in one direction of bias.     

Replacing -CH2CH2- with -CONH- does not significantly change rates of charge transport through Ag(TS)-SAM//Ga2O3/EGaIn junctions

This paper describes physical-organic studies of charge transport by tunneling through self-assembled monolayers (SAMs), based on systematic variations of the structure of the molecules constituting the SAM. Replacing a -CH(2)CH(2)- group with a -CONH- group changes the dipole moment and polarizability of a portion of the molecule and has, in principle, the potential to change the rate of charge transport through the SAM. In practice, this substitution produces no significant change in the rate of charge transport across junctions of the structure Ag(TS)-S(CH(2))(m)X(CH(2))(n)H//Ga(2)O(3)/EGaIn (TS = template stripped, X = -CH(2)CH(2)- or -CONH-, and EGaIn = eutectic alloy of gallium and indium). Incorporation of the amide group does, however, increase the yields of working (non-shorting) junctions (when compared to n-alkanethiolates of the same length). These results suggest that synthetic schemes that combine a thiol group on one end of a molecule with a group, R, to be tested, on the other (e.g., HS~CONH~R) using an amide-based coupling provide practical routes to molecules useful in studies of molecular electronics.     

Triboelectrification between smooth metal surfaces coated with self-assembled monolayers (SAMs)

Using a modified surface forces apparatus, we have simultaneously measured the friction and triboelectrification between both similar and dissimilar molecularly smooth hexadecanethiol-coated metal surfaces on mica substrates. On shearing dissimilar surfaces, the tribocurrent increases dramatically as the load or pressure is increased, with large fluctuations about the mean. Neither charge transfer nor fluctuations are observed when the symmetric surfaces are sheared against each other. We also find that the type of friction, i.e., stick-slip or smooth sliding, the load and friction force, the sliding distance, and recent previous history have additional fine influences on the triboelectrification. Our results suggest that frictional dissipation induces electron-hole formation and charge transfer between two shearing surfaces due to molecular-level roughness and defects and local dielectric constant changes, giving rise to the observed tribocurrents.     

Freezing the conductance of platinum(II) complexes by quantum interference effect

Understanding the impact of substituents on the quantum interference effect at single molecule scale is of great importance for the design of molecular devices. In this work, three platinum(II) complexes with –H, –NH₂ and –NO₂ groups on conductive backbones were designed and synthesized. Single-molecule conductance, which was measured using scanning tunnelling microscope break junction (STM-BJ) technique, demonstrated a conductance freeze phenomenon under the variation of substituents. Theoretical study revealed that, despite the electronic effect of the substituents shifting the energy level of molecular orbital, the quantum interference effect vanished the influence of electronic effect on the conductance and eventually leaded to the conductance freeze.     

Rotational polymorphism in 2-naphthalenethiol SAMs on Au(111)

We evidence by STM that 2-naphthalenethiol self-assembled monolayers formed at the n-tetradecane/Au(111) interface coexist as two structural phases which both possess molecules into two different orientations (standing and lying). Such a rotational polymorphism is observed and understood at the molecular level for the first time.     

Self-assembled monolayers (SAMs) of carboxylic acids: an overview

The field of self-assembled monolayers (SAMs) of organic compounds on different substrates is of importance because it provides a suitable and efficient method of surface modification. The formation of robust, stable monolayers from carboxylic acids on two and three dimensional surfaces of different substrates have been reported. Carboxylic acids are promising class of organic compounds for monolayer formations where traditional alkanethiols or alkoxysilanes show limitations.