Solvent Dependence of Tautomeric Equilibria of 1‐(o‐Substituted Phenyl)Barbituric and ‐2‐Thiobarbituric Acid Derivatives

Abstract

The enolisation tendencies of 1‐(o‐substituted phenyl)barbituric and ‐2‐thiobarbituric acid derivatives have been studied by observing the behaviour of the compounds in different solvents by ¹H and ¹³C NMR. It has been found that the enolisation tendencies of the thiobarbituric acid derivatives observed in polar solvents are greater than those of the barbituric acid derivatives. The ratio of keto–enol tautomers of thiobarbituric acid derivatives in DMSO and in DMF has been calculated.     

Calculation of the charge transfer transition energy of the mesitylene–ICl complex by ab initio and TDDFT methods: Comparison with other methylbenzene–ICl complexes

Of the four plausible isomeric structures of the mesitylene–ICl charge transfer (CT) complex, the most feasible one was determined by a detailed ab initio and DFT study at the HF, B3LYP and MPW1PW91 levels using the 6-31++G(d,p) basis set. Potential energy surface scans followed by frequency calculation and full optimization revealed that the I–Cl bond, with its I atom oriented towards the aromatic ring, stands vertically above an unsubstituted C-atom, being inclined at about 6° to the C ₃-axis. Complexation increases the I–Cl bond length. Correction for basis set superposition error through a counterpoise calculation yields a binding energy close to the experimental value. The electronic CT transition energy (hν _CT) with this ground-state structure as input was calculated in vacuo by the CIS method and in carbon tetrachloride medium by the TDDFT method under the polarizable continuum model. In a similar way the values of hν _CT were calculated for complexes of ICl with p-xylene, durene and hexamethylbenzene. Throughout the series of methylbenzene complexes, the TDDFT-calculated values of hν _CT were less than the experimental values and such underestimation may be attributed to the inherent difficulties of DFT to take into account long-range interactions. However, the trend of the variation of hν _CT with the number and position of methyl groups in the series was reasonably similar to the trend followed by the experimental CT transition energies.     

A frequency analysis of the ν9 band of CD3CD3: experiment and ab initio calculations

The infrared gaseous spectrum of CD₃CD₃ has been measured in the range of 530–670cm^?1 to investigate vibration—torsion effects in the ν₉ band. Three separate spectra all taken under different experimental conditions were recorded. The lines with (ΔK = ?1) and with high values of K show torsional splittings that are substantially larger than expected from the observed barrier height. These splittings are caused primarily by Coriolis-type interactions between the torsional stack of ν₉ = 1 and the corresponding stack for the ground vibrational state. Because of a near-degeneracy that exists between the states (ν₉ = 0, ν₄ = 3) and (ν₉ = 1, ν₄ = 0), three subbands (K, σ) = (15,1), (16,2), (17,3) are resonantly perturbed. For these cases, perturbation-allowed 3ν₄ torsional transitions have been identified. Here σ= 0, 1, 2 or 3 labels the torsional sublevels. Measurements from the ν₉ and 3ν₄ bands, frequencies from the far-infrared torsional spectra in the ground vibrational state, and lower state combination differences from the ν₉ + ν₄ ? ν₄ band were fitted to within experimental uncertainty using an effective Hamiltonian which considered three torsional stacks; one for the ground vibrational state and two for ν₉ = 1. In all, 22 parameters were determined using a total of 2001 lines. Of these, three parameters were the interstack couplings, eight are from the ground vibrational state and 11 are from the excited vibrational state. Two barrier-dependent torsion—rotation parameters, which were essential for obtaining a satisfactory fit, were calculated by ab initio methods.     

Electronic,Vibrational, and Superconducting Properties of High-Pressure Metallic SiH4： ab initio Calculations

We extensively explore the experimentally proposed metallic structure of hcp P63 for the hydrogen rich compound, SiH4. It is found that the lattice dynamic of this structure is severely unstable. By freezing the soften mode, an orthorhombic Pbcn structure is discovered to be dynamically stable up to 226GPa. Within the conventional BCS theory, the calculated critical temperature Tc within the proposed Pbcn structure is 16.5K at 188GPa, in good agreement with the experimental result （17.5K）. Thus, we propose that the current predicted orthorhombic phase is a better candidate for the metallic phase of SiH4.     

Feshbach resonances of the C3H− anion: laser autodetachment spectroscopy and ab initio calculations

The electronic spectra of the C₃H^? and C₃D^? anions have been studied above the lowest electron detachment threshold. On the basis of the vibrational, rotational analysis and ab initio calculations, the photodetachment spectrum is assigned to the d³ A″←a³ A″ Feshbach resonance in the bent chain C₃H(D)^? anion. The vibronic system is characterized by a long vibrational progression involving the CCH in plane bending mode ν₄. The potential curves along this coordinate obtained from the spectral analysis and theoretical calculations reveal the importance of vibronic coupling in the electronic excited states. A strong Renner–Teller effect is thought to be the reason for the existence of the Feshbach resonance because the ⁴Σ^? neutral parent and the ³Π anion excited states are close in energy. As for the neutral, ν₄ appears to be the active mode and drives the interaction between the Feshbach and the dipole bound states.     

Electronics and Structural Properties of Single-Walled Carbon Nanotubes Interacting with a Glucose Molecule：ab initio Calculations

The adsorption of glucose molecule on single-walled carbon nanotubes (SWCNTs) is investigated by density functional theory calculations. Adsorption energies and equilibrium distances are evaluated, and glucose binding to the typical semiconducting and metallic nanotubes with various diameters and chirality are compared. We also investigated the role of the structural defects on the adsorption capability of the SWCNTs. We could observe larger adsorption energies for the larger diameters semiconducting CNTs, while the story is paradoxical for the metallic CNTs. The obtained results reveal that the adsorption energy is significantly higher for nanotubes with higher chiral angles. Finally, the adsorption energies are calculated for defected nanotubes for various configurations such as glucose molecule approaching to the pentagon, hexagon, and heptagon sites in the tube surface. We find that the respected defects have a minor contribution to the adsorption mechanism of the glucose on SWNTs. The calculation of electron transfers and the density of states supports that the electronic properties of SWCNTs do not change significantly after the gluycose molecular adsorption. Consequently, one can predict that presence of glucose would neither modify the electronic structure of the SWCNTs nor direct to a change in the conductivity of the intrinsic nanotubes.     

Atomic additivity of the correlation energy in molecules—an ab initio MP4 and G3 study

It is shown that the closed shell valence electron molecular correlation energy of organic molecules in their ground states is a homogeneous multilinear function of the numbers of neutral atoms in their canonical hybridization state. The additivity is a robust feature, which holds for MP2(fc), MP3(fc) and MP4(fc) model calculations. The latter results obtained on a test set of 91 widely different organic molecules, exhibiting a whole gamut of electronic structure patterns, are excellent as evidenced by the absolute average deviation from the additivity values (AAD) of only 1.4 kcal mol^?1 and R ² = 0.999 93. The maximum absolute deviation (MAD) is 5.3 kcal mol^?1. The additivity formula for the total molecular electron correlation retrieved from G3 calculations also has an excellent performance (AAD = 1.2 kcal mol^?1, R ² = 0.999 98 and MAD = 7.2 kcal mol^?1). If it is taken into account that the additivity formulae require only back of the envelope calculations, these results are remarkable indeed, in particular since the G3 correlation energies span a very large range from 180.7 (methane) to 1642.8 (hexafluorocyclopropane) kcal mol^?1. Comparison of the exact electron correlation energies in free atoms with the corresponding average correlation energies in molecules reveals that a substantial increase in the latter provides an important contribution in overcoming a very strong Coulomb repulsion between the nuclei. It is shown that the additivity formulae are useful in detecting some special molecular features such as strong resonance and anti-aromaticity.     

Pressure Induced Metallization in the ε Phase of Solid Oxygen by ab initio Pseudopotential Plane-Wave Calculations

We perform an ab initio study on the electronic structure and charge density of the c-oxygen under high pressure, which is obtained by powder x-ray diffraction experiment recently. Our results show that the hybridization among the σg^＊, πu and πg^＊ bands in the e-oxygen are not significant even at megabar pressure. Pressure-induced metallization occurs due to the band overlapping near the Fermi level at about 50 GPa. A new network along the b-axis is formed and the 08 characteristic in the e phase disappears above 50 GPa even though the symmetry remains unchanged.     

Synthesis and Optical Properties of Films Formed by the Sol‐Gel Method in Mesoporous Matrices

The main laws governing the formation of films by the solgel method in the mesopores of anodic aluminum oxide, porous silicon, and synthetic opals have been considered. Investigations of the luminescence at 1.5 m in the structure porous silicon–gel, doped with erbium, have been analyzed. Special features of the synthesis of the film structure microporous xerogel–mesoporous anodic aluminum oxide, doped with erbium, terbium, and europium, and the possible factors that enhance the photoluminescence of lanthanides in the structure are shown.     

Pressure Effect Study on the Electronic and Optical Properties of BxIn1 – xAs Alloys Using DFT Calculation

Physics of the Solid State - In order to extract structural and electronic properties of BxIn1 – xAs ternary alloys and enrich the database of materials based on boron and...     

Experimental and ab initio study of the nuclear quadrupole interaction of 181 Ta-probes in an α-Fe2O3 single crystal

We report perturbed-angular-correlation (PAC) experiments on ¹⁸¹Hf (→¹⁸¹Ta)-implanted corundum α-Fe₂O₃ single crystal in order to determine the magnitude, symmetry and orientation of the electric-field-gradient (EFG) tensor at Ta donor impurity sites of this semiconductor. These results are analyzed in the framework of ab initio full-potential augmented-plane wave plus local orbital (FP-APW+lo) calculations. This combined analysis enables us to quantify the magnitude of the lattice relaxations induced by the presence of the impurity and to determine the charge state of the impurity donor level introduced by Ta in the band gap of the semiconductor.     

Calculation of Vibrational Energy-Spectra of α-Helical Protein Molecules and Its Properties

The quantum vibrational energy-spectra of amide-Is in alpha-protein molecules are calculated by using the discretely nonlinear Schrodinger equation and physical parameters appropriate to the systems on the basis of theory of bio-energy transport. The numerical results for the energy-spectra are basically consistent with the experimental values obtained by the infrared absorption and Raman scattering and emission-spectra of infrared lights of person's hand-fingers. Utilizing the energy-spectra we explain the laser-Raman spectrum from metabolically active E. Coli. and give some features of the infrared absorption of the protein molecules.     

Calculation of the structure and IR spectrum of hydrogen-bonded methyl-β-D-glucopyranoside by the density-functional method

The IR spectrum and structure of methyl-β-D-glucopyranoside have been studied theoretically taking into account the influence on them of the hydrogen bond formed in the sample. Density-functional theory with the B3LYP functional in basis 6-31G(d) was used to minimize the energies and calculate the structures, electro-optical parameters, force constants, frequencies of normal harmonic vibrations, and intensities in IR spectra of the simplest H-bonded dimeric complexes of methyl-β-D-glucopyranoside. The calculated spectra of H-bonded complexes were compared with those of the free molecule and the experimental spectrum in the range 400–3700 cm^–1. Conclusions about the structure of methyl-β-D-glucopyranoside were made. The interpretation of its IR spectrum was refined.     

Preparation and Properties of Epoxy‐Clay Nanocomposites

Epoxy‐clay nanocomposites were synthesized to examine the effects of adding different contents of nanoclays on the physical, mechanical, and thermal properties of the epoxy resin system used in composite pipes manufacturing. Diglycidyl ether of bisphenol‐A (epoxy) with a cycloaliphatic amine heat curing hardner was reinforced by 1–7 wt.% of an organically modified type of montmorillonite. SEM results showed the change in failure of epoxy from brittle to tough mode by addition of nanoclays. X‐ray results indicated some degree of exfoliation by 1 wt.% clay and a decrease in d‐spacing in higher clay loadings after that. The heat‐distortion temperature of epoxy-clay nanocomposites increased from 125.5 to 138.7°C with 3 wt.% organoclay loading. Tensile and flexural modulus increased with increasing clay loading in this type of nanocomposite, but addition of organically modified clay decreased the tensile and flexural strengths and tensile elongation at break. Addition of 7 wt.% nanoclay improved the impact strength by 25.6%.     

Calculation of the Parameters of a One‐Coordinate Model of the VGaSAs and VGaSnGa Complexes in Gallium Arsenide

Experimental optical bands of the emitting complexes (a gallium vacancy with a donor at the nearest, from the vacancy, sublattice site) V_GaS_As and V_GaSn_Ga in GaAs are investigated in a wide temperature range. The parameters of a onecoordinate model of these centers are determined. A configurationcoordinate diagram of the V_GaS_As complex is constructed. Calculation of the field dependences of emission rates is carried out in terms of the parameters of the onecoordinate model of the V_GaS_As complex and the data obtained are compared with the results of experimental studies of the emission of electron holes from a deeplying center of the V_GaS_As complex.     

Calculation of Quantum‐Chemical Characteristics of the Ground and Excited Electronic States of Porphin and Its Tetrapyrrole Isomers

Using the CNDO/S method, we have performed quantumchemical calculations of the ground and excited electronic states of porphin molecules (symmetry D _2h ) and a number of porphin isomers: porphycene (C_2h ), hemiporphycene, corphycene (C_2v ), isoporphycene, and three nonsynthesized structural isomers of the porphin skeleton by its bridge groups —(CH) _meso —. The results of the calculations are compared with the corresponding data for the freebase porphin molecule (H₂P). Near the boundary between the occupied and vacant orbitals the isomers form rows of singleelectron levels with similar energy characteristics. For the MOs of these isomers, the H₂P MOs closest in distribution on the comparable atomic centers are given. The weak (Q) and strong (B) transitions in the visible and near UV regions point to the porphyrin type of spectra of all the isomers. The calculation data on the excited electronic states of N, g, and ntype H₂P near and above the B states are given; the presence of such states in other isomers is shown. The calculation does not point to a difference in the position of the first singlet transitions in the first five isomers. The calculation data on the lower singlettriplet transitions are also reported.     

Formation and dissociation of protonated cytosine–cytosine base pairs in i-motifs by ab initio quantum chemical calculations

Formation and dissociation mechanisms of C-C＋ base pairs in acidic and alkaline environments are investigated, employing ab initio quantum chemical calculations. Our calculations suggest that, in an acidic environment, a cytosine monomer is first protonated and then dimerized with an unprotonated cytosine monomer to form a C-C＋ base pair; in an alkaline environment, a protonated cytosine dimer is first unprotonated and then dissociated into two cytosine monomers. In addition, the force for detaching a C-C＋ base pair was found to be inversely proportional to the distance between the two cytosine monomers. These results provide a microscopic mechanism to qualitatively explain the experimentally observed reversible formation and dissociation of i-motifs.