Determination of vitamin B6 using high-performance liquid chromatography with electrochemical detection

A chromatographic method for the determination of vitamin B₆ utilizing a thin-layer amperometric detector with a glassy carbon electrode has been described. The redox behavior of vitamin B₆ has been studied by means of cyclic voltammetry. The limit of detection is 4 ng for pyridoxine and 1 ng for pyridoxamine. Application of the technique for detection of vitamin B₆ in drugs was illustrated.     

Glycerol as a Substrate and Inactivator of Coenzyme B12-Dependent Diol Dehydratase

Diol dehydratase, dependent on coenzyme B₁₂ (B₁₂-dDDH), displays a peculiar feature of being inactivated by its native substrate glycerol (GOL). Surprisingly, the isofunctional enzyme, B₁₂-independent glycerol dehydratase (B₁₂-iGDH), does not undergo suicide inactivation by GOL. Herein we present a series of QM/MM and MD calculations aimed at understanding the mechanisms of substrate-induced suicide inactivation in B₁₂-dDDH and that of resistance of B₁₂-iGDH to inactivation. We show that the first step in the enzymatic transformation of GOL, hydrogen abstraction, can occur from both ends of the substrate (either C1 or C3 of GOL). Whereas C1 abstraction in both enzymes leads to product formation, C3 abstraction in B₁₂-dDDH results in the formation of a low energy radical intermediate, which is effectively trapped within a deep well on the potential energy surface. The long lifetime of this radical intermediate likely enables its side reactions, leading to inactivation. In B₁₂-iGDH, by comparison, C3 abstraction is an endothermic step; consequently, the resultant radical intermediate is not of low energy, and the reverse process of reforming the reactant is possible.     

Experimental Study of Hydrogen Bonding Potentially Stabilizing the 5′‐Deoxyadenosyl Radical from Coenzyme B12

Coenzyme B₁₂ can assist radical enzymes that accomplish the vicinal interchange of a hydrogen atom with a functional group. It has been proposed that the Co? C bond homolysis of coenzyme B₁₂ to cob(II)alamin and the 5′‐deoxyadenosyl radical is aided by hydrogen bonding of the corrin C19? H to the 3′‐O of the ribose moiety of the incipient 5′‐deoxyadenosyl radical, which is stabilized by 30 kJ mol^?1 (B. Durbeej et al., Chem. Eur. J. 2009 , 15, 8578–8585). The diastereoisomers (R)‐ and (S)‐2,3‐dihydroxypropylcobalamin were used as models for coenzyme B₁₂. A downfield shift of the NMR signal for the C19? H proton was observed for the (R)‐isomer (δ=4.45 versus 4.01 ppm for the (S)‐isomer) and can be ascribed to an intramolecular hydrogen bond between the C19? H and the oxygen of CHOH. Crystal structures of (R)‐ and (S)‐2,3‐dihydroxypropylcobalamin showed C19? H???O distances of 3.214(7) Å (R‐isomer) and 3.281(11) Å (S‐isomer), which suggest weak hydrogen‐bond interactions (?ΔG<6 kJ mol^?1) between the CHOH of the dihydroxypropyl ligand and the C19? H. Exchange of the C19? H, which is dependent on the cobalt redox state, was investigated with cob(I)alamin, cob(II)alamin, and cob(III)alamin by using NMR spectroscopy to monitor the uptake of deuterium from deuterated water in the pH range 3–11. No exchange was found for any of the cobalt oxidation states. 3′,5′‐Dideoxyadenosylcobalamin, but not the 2′,5′‐isomer, was found to act as a coenzyme for glutamate mutase, with a 15‐fold lower k_cat/K_M than 5′‐deoxyadenosylcobalamin. This indicates that stabilization of the 5′‐deoxyadenosyl radical by a hydrogen bond that involves the C19? H and the 3′‐OH group of the cofactor is, at most, 7 kJ mol^?1 (?ΔG). Examination of the crystal structure of glutamate mutase revealed additional stabilizing factors: hydrogen bonds between both the 2′‐OH and 3′‐OH groups and glutamate 330. The actual strength of a hydrogen bond between the C19? H and the 3′‐O of the ribose moiety of the 5′‐deoxyadenosyl group is concluded not to exceed 6 kJ mol^?1 (?ΔG).     

Stabilisation of Methylene Radicals by Cob(II)alamin in Coenzyme B12 Dependent Mutases

Coenzyme B₁₂ initiates radical chemistry in two types of enzymatic reactions, the irreversible eliminases (e.g., diol dehydratases) and the reversible mutases (e.g., methylmalonyl‐CoA mutase). Whereas eliminases that use radical generators other than coenzyme B₁₂ are known, no alternative coenzyme B₁₂ independent mutases have been detected for substrates in which a methyl group is reversibly converted to a methylene radical. We predict that such mutases do not exist. However, coenzyme B₁₂ independent pathways have been detected that circumvent the need for glutamate, β‐lysine or methylmalonyl‐CoA mutases by proceeding via different intermediates. In humans the methylcitrate cycle, which is ostensibly an alternative to the coenzyme B₁₂ dependent methylmalonyl‐CoA pathway for propionate oxidation, is not used because it would interfere with the Krebs cycle and thereby compromise the high‐energy requirement of the nervous system. In the diol dehydratases the 5′‐deoxyadenosyl radical generated by homolysis of the carbon–cobalt bond of coenzyme B₁₂ moves about 10 Å away from the cobalt atom in cob(II )alamin. The substrate and product radicals are generated at a similar distance from cob(II )alamin, which acts solely as spectator of the catalysis. In glutamate and methylmalonyl‐CoA mutases the 5′‐deoxyadenosyl radical remains within 3–4 Å of the cobalt atom, with the substrate and product radicals approximately 3 Å further away. It is suggested that cob(II )alamin acts as a conductor by stabilising both the 5′‐deoxyadenosyl radical and the product‐related methylene radicals.     

Electron Capture by the Thiyl Radical and Disulfide Bond: Ligand Effects on the Reduction Potential

The effect of non‐polar and polar ligands and of monovalent cations on the one‐electron reduction potential of the thiyl radical and the disulfide bond was evaluated. The reduction potentials E° for the CH₃S^.–n L/CH₃S^?–n L and CH₃SSCH₃–L/CH₃SSCH₃^.?–L redox couples were calculated at the B3LYP, M06‐2X and MP2 levels of theory, with n=1, 2 and L=CH₄, C₂H₄, H₂O, CH₃OH, NH₃, CH₃COOH, CH₃CONH₂, NH₄⁺, Na⁺, K⁺ and Li⁺. Non‐polar ligands decrease the E° value of the thiyl radical and disulfide bond, while neutral polar ligands favour electron uptake. Charged polar ligands and cations favour electron capture by the thiyl radical while disfavouring electron uptake by the disulfide bond. Thus, the same type of ligand can have a different effect on E° depending on the redox couple. Therefore, properties of an isolated ligand cannot uniquely determine E°. The ligand effects on E° are discussed in terms of the vertical electron affinity and reorganization energy, as well as molecular orbital theory. For a given redox couple, the ligand type influences the nature of the anion formed upon electron capture and the corresponding reorganization process towards the reduced geometry.     

Electrochemical behavior and parameters of hydrofullerene C60H36

Electrochemistry of hydrofullerene C₆₀H₃₆ was studied by cyclic voltammetry in THF and CH₂Cl₂ in the −47–14 °C temperature range. Hydrofullerene undergoes reversible one-electron reduction to form a radical anion in THF (E ⁰=−3.18 V (Fc⁰/Fc⁺), Fc=ferrocene) and irreversible one-electron oxidation in CH₂Cl₂ (E _p ^a =1.22 V (Fc⁰/Fc⁺)). The reduction potential was used to estimate electron affinity of hydrofullerene as EA=−0.33 eV. It was suggested that C₆₀H₃₆ is an isomer withT-symmetry in which 12 double bonds form four isolated benzenoid rings located in vertices of an imaginary inscribed tetrahedron on the molecular surface. For hydrofullerene, the “electrochemical gap” is an analog of the energy gap (HOMO−LUMO), equal to (E ^Ox−E ^Red)=4.4 V, and indicates that C₆₀H₃₆ is a sufficiently “hard” molecule with a low reactivity in redox reactions. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 2083–2087, November, 1999.     

Die vermutliche Struktur der Anodendroside. Glykoside und Aglykone, 331. Mitteilung

Five crystalline compounds (anodendrosides) have been isolated from Anodendron paniculatum (Roxb.)A. DC. (Apocynaceae). They represent glycosides containing unusual sugars. Tentative structures for anodendroside-A ( 155 ), ?E₁ ( 3 ), ?E₂ ( 84 ), ?F ( 144 ) and ?G ( 115 ) are now presented. These structures are based on UV., IR., but mostly on high resolution mass spectra. NMR.-spectra could be performed with A, O-acetyl-E₂ and O-acetyl-G, which are in good agreement with the suggested structures. The unusual methylendioxy group postulated in the sugar moiety of A, E₁ and E₂ was also established by chemical methods, yielding approximately 1 Mol. equiv. of formaldehyde after acid hydrolysis of anodendroside-E₂.     

Glycerol Dehydratases: Biochemical Structures,Catalytic Mechanisms,and Industrial Applications in 1,3-Propanediol Production by Naturally Occurring and Genetically Engineered Bacterial Strains

To date, two types of glycerol dehydratases have been reported: coenzyme B₁₂-dependent and coenzyme B₁₂-independent glycerol dehydratases. The three-dimensional structure of the former is a dimer of αβγ heterotrimer, while that of the latter is a homodimer. Their mechanisms of reaction are typically enzymatic radical catalysis. Functional radical in both the glycerol dehydratases is the adenosyl radical. However, the adenosyl radical in the former originates from coenzyme B₁₂ by homolytic cleavage, and that in the latter from S-adenosyl-methionine. Until some years ago, Clostridium butyricum VPI 1718 was the only microorganism known to possess B₁₂-independent glycerol dehydratase, but since then, several other bacteria with this unique capability have been identified. This article focuses on the glycerol dehydratases and on 1,3-propanediol production from glycerol by naturally occurring and genetically engineered bacterial strains containing glycerol dehydratase.     

Laser photoemission generation and electrochemical study of methyl radicals as secondary products of OH radicals capture by dimethyl sulfoxide molecules

Electrode reactions of intermediates formed during capture of OH radicals by dimethylsulfoxide molecules were studied by laser photoemission in aqueous buffer solutions and pH range from acidic to basic. The results were compared with those obtained previously for electrochemical behaviour of methyl radicals generated via photoemission from CH₃Cl. The essential similarity was found for parameters of irreversible one-electron transfer from/to these intermediates, i.e. the potentials E _1/2 on time-resolved voltammograms and rate constants at E = E _1/2. Hence, both active particles were concluded to be equivalent and corresponded to methyl radical. The primary product of OH radicals capture by DMSO molecules, i.e. adduct (CH₃)₂SO·(OH), was spontaneously decomposed to form ·CH₃ with time as low as <2 × 10⁻⁵ s. A simultaneous increase of the reduction wave height was observed at pH transition from low basic to low acidic and at illumination times T _m of an electrode with UV light if T _m ≥ 90–300 ms. The increase exceeded considerably the one-electron reduction level. These features were presumably caused by the rather slow formation of organomercury intermediates as interaction products of the components of the system with a mercury electrode.     

Synthesis, cyclic voltammetry, and UV–Vis studies of ferrocene-dithiafulvalenes as anticipated electron-donor materials

Abstract  

New ferrocenyl ketones were obtained as precursors of novel π-conjugated ferrocene-dithiafulvalene (Fc-DTF) and π-extended-ferrocenedithia-fulvalenes (π-exFc-DTF) as electron-donor conducting materials from ferrocene by a direct aroylation process using the Friedel–Crafts reaction. Novel Fc-DTF conjugates were synthesized using the Wittig–Horner reaction and their structures were determined. The redox behavior of the ferrocenyl carbonyl compounds Fc-DTF and Fc-π-exDTF was investigated in comparison to the parent ferrocene by means of cyclic voltammetry. A one-electron redox behavior was observed for carbonylferrocenes as one wave potential, while a two-electron process was observed as two oxidation waves for the conjugates. Introduction of electron-withdrawing groups led to increasing E _pa values and decreasing ΔE _p values. The UV–Vis spectra of some compounds were studied in comparison with ferrocene. The absorption spectra showed a red-shift with a slight increase in the absorption intensities.     

Nouveaux types de sucres acétyléniques. Communication préliminaire

Novel types of acetylenic sugars The coupling, following Cadiot's procedure, of a 6-bromo-5,6-dideoxy-1,2-O-isopropylidène-3-O-methyl-α-D -xylo-hex-5-yno-1, 4-furanose (1) with phenylacetylene, 2-propyn-1-ol or terminal acetylenic sugars gave with excellent yields the expected diynes (an enediyne when the terminal acetylene was the 3,5, 6-trideoxy-1,2-O-isopropylidene-α-D -glycero-hex-3-en-5-yno-1,4-furanose 7 ). The chloro analogue 8 of 1 on treatment with lithium thiophenate gave the corresponding phenylthio-acetylenic sugar 9 . An acetylene was also formed by reacting the gem-difluoro-olefinic sugar 10 with butyllithium whereas the same olefinic sugar and its 3-O-benzyl analogue 11 gave only a gem-fluoro-arylthio-olefinic sugar (13–15) as a mixture of the Z and E isomers (Z/E > 4) when treated with the conjugate base of an arylmercaptan.     

The B6‐vitamer Pyridoxal is a Sensitizer of UVA‐induced Genotoxic Stress in Human Primary Keratinocytes and Reconstructed Epidermis

UVA‐driven photooxidative stress in human skin may originate from excitation of specific endogenous chromophores acting as photosensitizers. Previously, we have demonstrated that 3‐hydroxypyridine‐derived chromophores including B₆‐vitamers (pyridoxine, pyridoxamine and pyridoxal) are endogenous photosensitizers that enhance UVA‐induced photooxidative stress in human skin cells. Here, we report that the B₆‐vitamer pyridoxal is a sensitizer of genotoxic stress in human adult primary keratinocytes (HEKa) and reconstructed epidermis. Comparative array analysis indicated that exposure to the combined action of pyridoxal and UVA caused upregulation of heat shock (HSPA6, HSPA1A, HSPA1L, HSPA2), redox (GSTM3, EGR1, MT2A, HMOX1, SOD1) and genotoxic (GADD45A, DDIT3, CDKN1A) stress response gene expression. Together with potentiation of UVA‐induced photooxidative stress and glutathione depletion, induction of HEKa cell death occurred only in response to the combined action of pyridoxal and UVA. In addition to activational phosphorylation indicative of genotoxic stress [p53 (Ser15) and γ‐H2AX (Ser139)], comet analysis indicated the formation of Fpg‐sensitive oxidative DNA lesions, observable only after combined exposure to pyridoxal and UVA. In human reconstructed epidermis, pyridoxal preincubation followed by UVA exposure caused genomic oxidative base damage, procaspase 3 cleavage and TUNEL positivity, consistent with UVA‐driven photooxidative damage that may be relevant to human skin exposed to high concentrations of B₆‐vitamers.     

Negatively Charged Metallacarborane Redox Couples with Both Members Stable to Air

The metallacarborane [3,3′‐Co(1,2‐closo‐C₂B₉H₁₁)₂]^? has been synthesized. This species allows the formation of redox couples in which both partners are negatively charged. The E_1/2 potential can be tuned by adjusting the nature and number of substituents on B and C. The octaiodinated species [3,3′‐Co(1,2‐closo‐C₂B₉H₇I₄)₂]^? is the most favorable, as it is isolatable and stable in air. A DFT study on stability and redox potentials of complexes has been performed.     

Stereochemistry of the Methyl Group in (R)‐3‐Methylitaconate Derived by Rearrangement of 2‐Methylideneglutarate Catalysed by a Coenzyme B12‐Dependent Mutase

2‐Methylideneglutarate mutase is an adenosylcobalamin (coenzyme B₁₂)‐dependent enzyme that catalyses the equilibration of 2‐methylideneglutarate with (R)‐3‐methylitaconate. This reaction is believed to occur via protein‐bound free radicals derived from substrate and product. The stereochemistry of the formation of the methyl group of 3‐methylitaconate has been probed using a `chiral methyl group'. The methyl group in 3‐([²H₁,³H]methyl)itaconate derived from either (R)‐ or (S)‐2‐methylidene[3‐²H₁,3‐³H₁]glutarate was a 50 : 50 mixture of (R)‐ and (S)‐forms. It is concluded that the barrier to rotation about the C−C bond between the methylene radical centre and adjacent C‐atom in the product‐related radical [^.CH₂CH(⁻O₂CC=CH₂)CO₂⁻] is relatively low, and that the interaction of the radical with cob(II)alamin is minimal. Hence, cob(II)alamin is a spectator of the molecular rearrangement of the substrate radical to product radical.     

Déconjugaison d'énones dérivées de sucres Communication préliminaire

Deconjugation of sugars enones. Preliminary Communication Branched-chain sugar enones 1 and 2 ( R = Ac) deconjugated toposelectively (only the E isomers reacting) to 3 . The same phenomenon was noted in the case of Z- 4 which gave E- 5 . The kinetic parameters of these reactions favored a concerted mechanism, i.e. a [1, 5]-sigmatropic shift.     

Variation of the Effective Activation Energy Throughout the Glass Transition

Summary: An advanced isoconversional method has been applied to determine the effective activation energies (E) for the glass transition in polystyrene (PS), poly(ethylene terephthalate) (PET), and boron oxide (B₂O₃). The values of E decrease from 280 to 120 kJ · mol⁻¹ in PS, from 1 270 to 550 kJ mol⁻¹ in PET, and from 290 to 200 kJ mol⁻¹ in B₂O₃. It is suggested that a significant variation in E should be observed for the fragile glasses that typically include polymers.

Variation in the effective activation energy of PS, PET, and B₂O₃ with temperature.     

Theoretical and Experimental Investigation of Functionalized Cyanopyridines Yield an Anolyte with an Extremely Low Reduction Potential for Nonaqueous Redox Flow Batteries

Cyanopyridines and cyanophenylpyridines were investigated as anolytes for nonaqueous redox flow batteries (RFBs). The three isomers of cyanopyridine are reduced at potentials of −2.2 V or lower vs. ferrocene^+/0 (Fc^+/0), but the 3-CNPy⋅⁻ radical anion forms a sigma-dimer that is re-oxidized at E≈−1.1 V, which would lead to poor voltaic efficiency in a RFB. Bulk electrochemical charge-discharge cycling of the cyanopyridines in acetonitrile and 0.50 M [NBu₄][PF₆] shows that 2-CNPy and 4-CNPy lose capacity quickly under these conditions, due to irreversible chemical reaction/decomposition of the radical anions. Density-functional theory (DFT) calculations indicated that adding a phenyl group to the cyanopyridines would, for some isomers, limit dimerization and improve the stability of the radical anions, while shifting their E_1/2 only about +0.10 V relative to the parent cyanopyridines. Among the cyanophenylpyridines, 3-CN-6-PhPy and 3-CN-4-PhPy are the most promising as anolytes. They exhibit reversible reductions at E_1/2=−2.19 and −2.22 V vs. ferrocene^+/0, respectively, and retain about half of their capacity after 30 bulk charge-discharge cycles. An improved version of 3-CN-6-PhPy with three methyl groups (3-cyano-4-methyl-6-(3,5-dimethylphenyl)pyridine) has an extremely low reduction potential of −2.50 V vs. Fc^+/0 (the lowest reported for a nonaqueous RFB anolyte) and loses only 0.21 % of capacity per cycle during charge-discharge cycling in acetonitrile.     

Unprecedented stable aqueous semiquinone methide radical formation interferes with adsorptive cathodic stripping voltammetry of cobalt methyl thymol blue

A putatively highly sensitive and selective method for the determination of cobalt in aqueous samples by catalytic adsorptive cathodic stripping voltammetry using methyl thymol blue (MTB) as the ligand has been documented [A. Safavi, E. Shams, Talanta 51 (2000) 1117] and its underlying mechanism has been briefly explored [A. Safavi, E. Shams, Electroanalysis 14 (2002) 708]. In an attempt to adapt the method for application in metalloprotein analysis we obtained erratic results, which were traced down to the redox non-innocence of the free ligand in the potential range prescribed for the metal analysis. On the hanging mercury drop electrode free methyl thymol blue is reversibly one-electron reduced to the semiquinone form with E_m,7.0 = −482 mV versus NHE at 22 °C, and the radical is subsequently quasi-reversibly one-electron reduced to the quinol form with E_m,7 ≈ −0.9 V. This observation invalidates the use of MTB in electrochemical analysis of metal ions. This is also the first observation ever of a stable quinone methide radical in aqueous solution.     

Free-radical polymerization of a reducing vinyl sugar ester in dimethylformamide and water

To develop a new synthetic polymer containing sugar branches, radical polymerization of the reducing vinyl sugar ester 6-O-vinyladipoyl-D -glucose ( 1 ) was performed in an organic solvent or in water. The polymers obtained with several azoinitiators in dimethylformamide (DMF) showed comparatively low average molecular weight (M̄_n ≈ 4500). In contrast, the use of a redox initiator (FeSO₄ and H₂O₂) in water gave polymers of higher average molecular weight (M̄_n ≈ 33000) in higher yield (90%), followed by crosslinking at high conversions.