Highly sensitive amplified electronic detection of DNA by biocatalyzed precipitation of an insoluble product onto electrodes

The amplified detection of a target DNA, based on the alkaline phosphatase oxidative hydrolysis of the soluble 5-bromo-4-chloro-3-indoyl phosphate to the insoluble indigo product as an amplification path, is addressed by two different sensing configurations. The accumulation of the insoluble product on Au electrodes or Au/quartz crystals alters the interfacial electron-transfer resistance at the Au electrode or the mass associated with the piezoelectric crystal, thus enabling the quantitative transduction of the DNA sensing by Faradaic impedance spectroscopy or microgravimetric quartz crystal microbalance measurements, respectively. One sensing configuration involves the association of a complex consisting of the target DNA and a biotinylated oligonucleotide to the functionalized transducers. The binding of the avidin/alkaline phosphatase conjugate to the sensing interface followed by the biocatalyzed precipitation provides the amplification path for the analysis of the target DNA. This analysis scheme was used to sense the target DNA with a sensitivity limit that corresponds to 5 x 10(-14) M. The second amplified detection scheme involves the use of a nucleic-acid-functionalized alkaline phosphatase as a biocatalytic conjugate for the precipitation of the insoluble product. Following this scheme, the functionalized transducers are interacted with the analyzed sample that was pretreated with the oligonucleotide-modified alkaline phosphatase, followed by the biocatalyzed precipitation as the amplification route for the analysis of the target DNA. By the use of this configuration, a detection limit corresponding to 5 x 10(-13) M was achieved. Real clinical samples of the Tay-Sachs genetic disorder were easily analyzed by the developed detection routes.     

Modified Electrodes with Switchable Selectivity for Cationic and Anionic Redox Species

The modified electrode functionalized with a mixed‐polymer brush composed of poly(2‐vinylpyridine) and polyacrylic acid tethered to the surface demonstrated switchable interfacial properties discriminating negatively and positively charged redox species. The switchable electrochemical process was characterized by differential pulse voltammetry and Faradaic impedance spectroscopy. The electrochemical system was discussed as a model of an electrochemical multiplexer with two chemical redox inputs, the pH input operating as the selecting signal and one electronic output signal readable by the impedance spectroscopy in the form of the interfacial resistance. The modified electrode represents a novel component for integration with biocatalytic and biocomputing systems aiming at biochemically and electronically controlled actuators.     

Performance of a Faradaic impedimetric immunosensor for blood group antigen A

The performance is described of a label-free Faradaic impedimetric immunosensor based on immobilized monoclonal IgM antibodies to blood group antigen A (anti–A) for blood typing. Anti–A was directly immobilized onto gold electrodes modified with an amine-reactive self assembled monolayer of dithiobis(succinimidylundecanoate). The alteration of the interfacial features of the electrodes due to different modification or recognition steps was probed by Faradaic impedance spectroscopy and cyclic voltammetry in the presence of a hexacyanoferrate(II)/(III) redox couple. Various optimization studies were undertaken with respect to the construction and potential use of the immunosensors as a diagnostic tool for blood typing.     

Impedimetric characterization of the changes produced in the electrode–solution interface by bacterial attachment

This paper describes a new method for measuring the attachment of bacteria, specifically Escherichia coli on platinum electrodes using impedance spectroscopy. Impedance spectroscopy measurements showed that the double layer capacitance of the electrode was very sensitive both to the concentration of bacteria in the solution and to the attachment time. Impedance measurements of E. coli were compared with classical measurements of bacterial attachment on identical electrodes such as staining/microscopy and bacterial removal by sonication and plating onto agar. The relationship between the measured impedance of the electrode during attachment and the biophysical processes involved is discussed.     

Semiconductor quantum dots for bioanalysis

Semiconductor nanoparticles, or quantum dots (QDs), have unique photophysical properties, such as size-controlled fluorescence, have high fluorescence quantum yields, and stability against photobleaching. These properties enable the use of QDs as optical labels for the multiplexed analysis of immunocomplexes or DNA hybridization processes. Semiconductor QDs are also used to probe biocatalytic transformations. The time-dependent replication or telomerization of nucleic acids, the oxidation of phenol derivatives by tyrosinase, or the hydrolytic cleavage of peptides by proteases are probed by using fluorescence resonance energy transfer or photoinduced electron transfer. The photoexcitation of QD-biomolecule hybrids associated with electrodes enables the photoelectrochemical transduction of biorecognition events or biocatalytic transformations. Examples are the generation of photocurrents by duplex DNA assemblies bridging CdS NPs to electrodes, and by the formation of photocurrents as a result of biocatalyzed transformations. Semiconductor nanoparticles are also used as labels for the electrochemical detection of DNA or proteins: Semiconductor NPs functionalized with nucleic acids or proteins bind to biorecognition complexes, and the subsequent dissolution of the NPs allows the voltammetric detection of the related ions, and the tracing of the recognition events.     

Magnetoswitchable controlled hydrophilicity/hydrophobicity of electrode surfaces using alkyl-chain-functionalized magnetic particles: application for switchable electrochemistry

Magnetic nanoparticles consisting of undecanoate-capped magnetite (average diameter approximately 4.5 nm; saturated magnetization, M(s), 38.5 emu g(-1)) are used to control and switch the hydrophobic or hydrophilic properties of the electrode surface. A two-phase system consisting of an aqueous buffer solution and a toluene phase that includes the suspended capped magnetic nanoparticles is used to control the interfacial properties of the electrode surface. The magnetic attraction of the functionalized particles to the electrode by means of an external magnet yields a hydrophobic interface that acts as an insulating layer, prohibiting interfacial electron transfer. The retraction of the magnetic particles from the electrode to the upper toluene phase by means of the external magnet generates a hydrophilic electrode that reveals effective interfacial electron transfer. The electron-transfer resistance and double-layer capacitance of the electrode surface upon the attraction and retraction of the functionalized magnetic particles to and from the electrode, respectively, by means of the external magnet were probed by Faradaic impedance spectroscopy (R(et) = 170 Omega and C(dl) = 40 microF sm(-2) in the hydrophilic state of the electrode and R(et) = 22 k Omega and C(dl) = 0.5 microF sm(-2) in the hydrophobic state of the interface). The magnetoswitchable control of the interface enables magnetic switching of the bioelectrocatalytic oxidation of glucose in the presence of glucose oxidase and ferrocene dicarboxylic acid to "ON" and "OFF" states.     

Electrode independent chemoresistive response for cobalt phthalocyanine in the space charge limited conductivity regime

The electrical properties of 50 nm thick metallophthalocyanine films, prepared by organic molecular beam epitaxy (OMBE) on interdigitated electrodes, were studied with DC current-voltage measurements and impedance spectroscopy. The transition from Ohmic behavior at low voltages to space-charge-limited conductivity (SCLC) at higher voltages depends on the metal electrode (Pt, Pd, and Au), but does not correlate with the work function of the electrode. Impedance spectroscopy studies show the coexistence of low- and high-frequency traps in the thin film devices, and the contribution of low-frequency traps associated with Ohmic behavior diminishes at higher bias. Although device resistances are strongly influenced by the electrode material, and vary by a factor of over 300, the relative chemical sensor responses on exposure to dimethyl methylphosphonate (DMMP), methanol, water, or toluene vapors are similar for CoPc on Pt, Pd, and Au electrodes when these devices are operated in the SCLC regime at room temperature. When the devices are operated at voltages where the low-frequency interfacial traps are filled, the sensor response to analyte becomes uniform and reliable regardless of the specific interfacial electrode contact.     

Screen-printed electrodes as impedimetric immunosensors for the detection of anti-transglutaminase antibodies in human sera

The concentration of anti-transglutaminase antibodies in human sera is an important analytical marker for the diagnosis of the autoimmune disorder celiac disease. In this work, an immunosensor for the electrochemical detection of anti-transglutaminase antibodies in human sera was developed. The immunosensor is based on the immobilization of transglutaminase onto screen-printed gold electrodes which were covered with a polyelectrolyte layer of poly (sodium-4-styrensulfonic acid). The antigen-antibody interaction was evaluated using an amplification step: incubation with peroxidase (POD)-labeled immunoglobulins and subsequent biocatalytic oxidation of 3-amino-9-ethylcarbazole (AEC). Changes in the interfacial properties of the sensor electrode were determined by electrochemical impedance spectroscopy (EIS). Impedance spectra could be fitted to a Randles equivalent circuit containing a constant phase element (CPE). Furthermore, it was shown that impedance measurements could be simplified by performing EIS at only two selected frequencies, without loss of reliability. Incubation of these disposable immunosensor chips with various anti-transglutaminase antibody concentrations resulted in changes in their charge transfer resistance (R_ct). Thereby, a calibration graph could be established. Finally, immunosensors were used for characterizing different human sera with respect to their anti-transglutaminase autoantibody concentration of the IgG and IgA type.     

Influence of Nafion Coatings and Surfactant on the Stripping Voltammetry of Heavy Metals at Bismuth‐Film Modified Carbon Film Electrodes

Nafion polymer coated bismuth‐film‐modified carbon film electrodes have been investigated for reducing the influence of contaminants such as surfactants in the anodic stripping voltammetry of trace metal ions. The influence of the coating on electrode response has been tested with both ex situ and in situ bismuth film deposition, with and without the polymer coating. The electrode assemblies and interfacial characteristics in the presence of the non‐ionic surfactant Triton‐X‐100 have been probed with electrochemical impedance spectroscopy. The Nafion coating successfully decreases the adsorption of Triton on the bismuth film surface, and demonstrates that this strategy allows measurement of these trace metals in environmental samples containing surfactants.     

DNA‐Modified Screen‐Printed Electrodes with Nanostructured Films of Multiwall Carbon Nanotubes,Hydroxyapatite and Montmorillonite

Nanostructured films were deposited at the surface of working electrode of the screen‐printed assembly and utilized for the surface modification with double‐stranded DNA. The basic electrochemical properties of the sensors were investigated using voltammetric methods. Modified electrodes were also characterized by scanning electron microscopy and electrochemical impedance measurements. It was found that the electrode modification with DNA and nanomodifier leads to an enhanced sensitivity of the DNA voltammetric detection. New potentialities of the utilization of the K₃[Fe(CN)₆] cyclic voltammetric signal and electrochemical impedance spectroscopy were found. The DNA‐based biosensors showed good repeability and necessary stability within several days.     

Probing kinase activities by electrochemistry, contact-angle measurements, and molecular-force interactions

Three different methods to investigate the activity of a protein kinase (casein kinase, CK2) are described. The phosphorylation of the sequence-specific peptide (1) by CK2 was monitored by electrochemical impedance spectroscopy (EIS). Phosphorylation of the peptide monolayer assembled on a Au electrode yields a negatively charged surface that electrostatically repels the negatively charged redox label [Fe(CN)6]3-/4-, thus increasing the interfacial electron-transfer resistance. The phosphorylation process by CK2 is further amplified by the association of the anti-phosphorylated peptide antibody to the monolayer. Binding of the antibody insulates the electrode surface, thus increasing the interfacial electron-transfer resistance in the presence of the redox label. This method enabled the quantitative analysis of the concentration of CK2 with a detection limit of ten units. The second method employed involved contact-angle measurements. Although the peptide 1-functionalized electrode revealed a contact angle of 67.5 degrees , phosphorylation of the peptide yielded a surface with enhanced hydrophilicity, 36.8 degrees. The biocatalyzed cleavage of the phosphate units with alkaline phosphatase regenerates the hydrophobic peptide monolayer, contact angle 55.3 degrees . The third method to characterize the CK2 system involved chemical force measurements between the phosphorylated peptide monolayer associated with the Au surface and a Au tip functionalized with the anti-phosphorylated peptide antibody. Although no significant rupture forces existed between the modified tip and the 1-functionalized surface (6+/-2 pN), significant rupture forces (multiples of 120+/-20 pN) were observed between the phosphorylated monolayer-modified surface and the antibody-functionalized tip. This rupture force is attributed to the dissociation of a simple binding event between the phosphorylated peptide and the fluorescent antibody (Fab) binding region.     

Direct route to well-defined, chemically diverse electrode arrays

The selective placement of molecules of interest at specific locations on surfaces is a keystone for the bridge between interfacial science and technology. One approach to this problem is the use of electrochemistry to direct interfacial reactions that immobilize species from solution onto surfaces. In this study, sets of individually functionalized gold electrodes were formed by the selective formation of monolayers from four different alkyl thiosulfates. Analysis of the arrays using spatially resolved X-ray photoelectron spectroscopy (XPS) revealed each type of functionality exclusively on the electrode to which it was directed. The wetting behavior of these surfaces was also consistent with homogeneous monolayers placed selectively on each electrode. The flexibility of this method provides the ability to produce a wide variety of chemical patterns at interfaces of interest for a range of technological applications.     

Application of the avidin–biotin interaction to immobilize DNA in the development of electrochemical impedance genosensors

Impedance spectroscopy is a rapidly developing technique for the transduction of biosensing events at the surface of an electrode. The immobilization of biomaterial as DNA strands on the electrode surface alters the capacitance and the interfacial electron transfer resistance of the conductive electrodes. The impedimetric technique is an effective method of probing modifications to these interfacial properties, thus allowing the differentiation of hybridization events. In this work, an avidin bulk-modified graphite–epoxy biocomposite (Av-GEB) was employed to immobilize biotinylated oligonucleotides as well as double-stranded DNA onto the electrode surface. Impedance spectra were recorded to detect the change in the interfacial electron transfer resistance (R _et) of the redox marker ferrocyanide/ferricyanide at a polarization potential of +0.17 V. The sensitivity of the technique and the good reproducibility of the results obtained with it confirm the validity of this method based on a universal affinity biocomposite platform coupled with the impedimetric technique.     

Integrated, electrically contacted NAD(P)+-dependent enzyme-carbon nanotube electrodes for biosensors and biofuel cell applications

Integrated, electrically contacted beta-nicotinamide adenine dinucleotide- (NAD(+)) or beta-nicotinamide adenine dinucleotide phosphate- (NADP(+)) dependent enzyme electrodes were prepared on single-walled carbon nanotube (SWCNT) supports. The SWCNTs were functionalized with Nile Blue (1), and the cofactors NADP(+) and NAD(+) were linked to 1 through a phenyl boronic acid ligand. The affinity complexes of glucose dehydrogenase (GDH) with the NADP(+) cofactor or alcohol dehydrogenase (AlcDH) with the NAD(+) cofactor were crosslinked with glutaric dialdehyde and the biomolecule-functionalized SWCNT materials were deposited on glassy carbon electrodes. The integrated enzyme electrodes revealed bioelectrocatalytic activities, and they acted as amperometric electrodes for the analysis of glucose or ethanol. The bioelectrocatalytic response of the systems originated from the biocatalyzed oxidation of the respective substrates by the enzyme with the concomitant generation of NAD(P)H cofactors. The electrocatalytically mediated oxidation of NAD(P)H by 1 led to amperometric responses in the system. Similarly, an electrically contacted bilirubin oxidase (BOD)-SWCNT electrode was prepared by the deposition of BOD onto the SWCNTs and the subsequent crosslinking of the BOD units using glutaric dialdehyde. The BOD-SWCNT electrode revealed bioelectrocatalytic functions for the reduction of O(2) to H(2)O. The different electrically contacted SWCNT-based enzyme electrodes were used to construct biofuel cell elements. The electrically contacted GDH-SWCNT electrode was used as the anode for the oxidation of the glucose fuel in conjunction with the BOD-SWCNT electrode in the presence of O(2), which acted as an oxidizer in the system. The power output of the cell was 23 muW cm(-2). Similarly, the AlcDH-SWCNT electrode was used as the anode for the oxidation of ethanol, which was acting as the fuel, with the BOD-SWCNT electrode as the cathode for the reduction of O(2). The power output of the system was 48 microW cm(-2).     

Magnetoswitchable reactions of DNA monolayers on electrodes: gating the processes by hydrophobic magnetic nanoparticles

Biorecognition and biocatalytic reactions of DNA monolayers, such as hybridization, polymerization, and hydrolytic digestion, were followed in situ by chronocoulometry and Faradaic impedance spectroscopy. Hydrophobic magnetic nanoparticles attracted to, and retracted from, the electrode surface by an external magnetic field were used to activate and inhibit the DNA-monolayer reactions, respectively. The attraction of the magnetic nanoparticles to the electrode surface generated a hydrophobic thin film on the surface that is not permeable for the water-soluble components required for the DNA-monolayer reactions. This results in the inhibition of the DNA-monolayer reactions. The retraction of the magnetic nanoparticles from the surface regenerated the free nucleic acid-functionalized surface that was exposed to the aqueous solution, thus reactivating the DNA-monolayer reactions. The reversible inhibition and activation of the DNA-monolayer reactions upon the cyclic attraction-retraction of the hydrophobic magnetic nanoparticles may be used to synthesize programmed DNA chips.     

Modeling the surface phenomena in carbon paste electrodes by low frequency impedance and double-layer capacitance measurements

Impedance and capacitance studies have been performed with covalently coupled Glucose oxidase (GOD) enzyme, covalently coupled flavin adenine dinucleotide (FAD), reconstituted GOD enzyme and blank carbon paste electrodes to study the changes in the electrochemical interfacial properties. Impedance studies were performed using a low frequency impedance technique and the electrochemical surface capacitance was measured by a pulse technique. We have attempted to fit the experimental values to an equivalent circuit model. The Randles' cell circuit with Warburg impedance modeled well the experimental values and the behavior of the enzyme electrodes. The individual components of the model were calculated and the parameters were explained. The blank paste electrode showed a constant phase element behavior.     

电化学阻抗谱法测定固态聚合物电解质的本体电阻

采用电化学阻抗谱法,对阻抗谱中的聚合物电解质本体电阻（Rb）与膜厚（L）的关系和固体聚合物电解质/惰性电极间的界面阻抗随直流电压的变化趋势进行了研究.结果表明,阻抗谱中聚合物电解质本体电阻（Rb）含有一定的阻塞电极/聚合物电解质间的界面阻抗;由于界面双电层电容的变化,在直流电压0.15～3 V范围内,界面阻抗随电压的增大而减小.     

Chemical Adsorption onto an ITO Substrate of Single‐Wall Carbon Nanotube Functionalized by Carboxylic Groups as an Efficient Support for Electrocatalyst

A single‐wall carbon nanotube functionalized by carboxylic groups (SWNT‐CA) was found to be adsorbed on an indium tin oxide (ITO) electrode by chemical interaction between carboxylic groups and the ITO surface. The adsorption experiments indicated that the narrow pH conditions (around pH 3.0) exist for its adsorption which is restricted by preparation of stable fluid dispersion (favorable at higher pH) and by the chemical interaction (favorable at lower pH). Atomic force microscopic (AFM) measurements suggest that fragmented SWNT‐CA are adsorbed, primarily lying on the surface. Electrochemical impedance analysis indicated that an electrochemical double layer capacitance of the SWNT‐CA/ITO electrode is considerably higher than that for the ITO electrode, suggesting that the interfacial area between the electrode surface and the electrolyte solution is enlarged by the SWNT‐CA layer. Pt particles were deposited as a catalyst on the bare ITO and SWNT‐CA‐coated ITO (SWNT‐CA/ITO) electrodes to give respective Pt‐modified electrodes (denoted as a Pt/ITO electrode and a Pt/SWNT‐CA/ITO electrode, respectively). The cathodic current for the Pt/SWNT‐CA/ITO electrode was 1.7 times higher than that for the Pt/ITO electrode at 0.0 V, showing that the Pt/SWNT‐CA/ITO electrode works more efficiently for O₂ reduction at 0.0 V due to the SWNT‐CA layer. The enhancement by the SWNT‐CA layer is also effective for electrocatalytic proton reduction. It could be ascribable to the enlarged interfacial area between the electrode surface and the electrolyte solution.     

Renewable dehydrogenase-based interfaces for bioelectronic applications

Bioelectronic interfaces that establish electrical communication between redox enzymes and electrodes have potential applications as biosensors, biocatalytic reactors, and biological fuel cells. However, these interfaces contain labile components, including enzymes and cofactors, which have limited lifetimes and must be replaced periodically to allow long-term operation. Current methods to fabricate bioelectronic interfaces do not allow facile replacement of these components, thus limiting the useful lifetime of the interfaces. In this paper we describe a versatile new fabrication approach that binds the enzymes and cofactors using reversible ionic interactions. This approach allows the interface to be removed via a simple pH change and then replaced to fully regenerate the biocatalytic activity. The positively charged polyelectrolyte poly(ethylenimine) was used to ionically bond a dehydrogenase enzyme and its cofactor to a gold electrode that was functionalized with 3-mercaptopropionic acid and the electron mediator toluidine blue O. By reducing the pH, the surface-bound 3-mercaptopropionic acid was protonated, disrupting the ionic bonds and releasing the enzyme-modified polyelectrolyte. After neutralization, fresh enzyme and cofactor were bound, regenerating the bioelectronic interface. Cyclic voltammetry, chronoamperometry, constant potential amperometry, electrochemical impedance spectroscopy, and Fourier transform infrared spectroscopy analyses were used to characterize the bioelectronic interfaces. For the two enzymes tested (secondary alcohol dehydrogenase and sorbitol dehydrogenase) and their respective cofactors (beta-nicotinamide adenine dinucleotide phosphate and beta-nicotinamide adenine dinucleotide), the reconstituted interface exhibited a surface coverage, an electron-transfer coefficient, and a turnover rate similar to those of the original interface.     

Bioinspired Artificial Photosynthetic Systems

Mimicking photosynthesis using artificial systems, as a means for solar energy conversion and green fuel generation, is one of the holy grails of modern science. This perspective presents recent advances towards developing artificial photosynthetic systems. In one approach, native photosystems are interfaced with electrodes to yield photobioelectrochemical cells that transform light energy into electrical power. This is exemplified by interfacing photosystem I (PSI) and photosystem II (PSII) as an electrically contacted assembly mimicking the native Z-scheme, and by the assembly of an electrically wired PSI/glucose oxidase biocatalytic conjugate on an electrode support. Illumination of the functionalized electrodes led to light-induced generation of electrical power, or to the generation of photocurrents using glucose as the fuel. The second approach introduces supramolecular photosensitizer nucleic acid/electron acceptor complexes as functional modules for effective photoinduced electron transfer stimulating the subsequent biocatalyzed generation of NADPH or the Pt-nanoparticle-catalyzed evolution of molecular hydrogen. Application of the DNA machineries for scaling-up the photosystems is demonstrated. A third approach presents the integration of artificial photosynthetic modules into dynamic nucleic acid networks undergoing reversible reconfiguration or dissipative transient operation in the presence of auxiliary triggers. Control over photoinduced electron transfer reactions and photosynthetic transformations by means of the dynamic networks is demonstrated.