Muonium diffusion in ice

Muonium (Mu, μ⁺e⁻) is generally regarded as a light isotope of hydrogen. The procession signals of muonium in single crystals of H₂O and D₂O ice have been studied from 8 to 263 K using the muon spin rotation (μSR) technique. Transverse spin relaxation rates have been extracted and interpreted in terms of modulation of the dipolar interaction between muonium and the protons/deuterons in the lattice by translational diffusion of muonium. In contrast to the situation for H and a previous claim for Mu, muonium is found to be diffusing at temperatures as low as 8 K. An activation energy of 40 meV is obtained by fitting the highest temperature data to an Arrhenius expression. At low temperature muonium is thought to diffuse by quantum tunnelling.     

Muon Spin Rotation/Resonance (μSR) for Studying Radical Reactivity of Unsaturated Organophosphorus Compounds

The positive muon (μ⁺) can be regarded as a light isotope of proton and has been an important tool to study radical reactions of organic compounds. Recently, muons have been applied to produce short-lived paramagnetic species from the heavier unsaturated organic molecules including the p-block elements. This article overviews recent muon spin rotation/resonance (μSR) studies on the phosphorus analogs of alkenes, anthracenes, and cyclobutane-1,3-diyls together with the fundamentals of μSR. The acyclic phosphaalkene of P=C and phosphasilenes of P=Si can accept muonium (Mu=[μ⁺e⁻]) at the heavier double bonds, and the corresponding radicals have been characterized. The phosphorus atom in 9-phosphaanthracene, whose P=C double bond is stabilized by the peri-substituted CF₃ groups, predominantly captures muonium to provide the corresponding paramagnetic fused heterocyclic system. The peri-trifluoromethyl groups are functional to promote the unprecedented light isotope effect of muon providing the planar three-cyclic molecular structure to consume the increased zero-point energy. The formally open-shell singlet 1,3-diphosphacyclobutane-2,4-diyl unit can accept muonium at the (ylidic) phosphorus or the skeletal radicalic carbon, and the corresponding paramagnetic phosphorus heterocycles can be characterized by μSR. The findings on these muoniation processes to the unsaturated phosphorus-containing compounds will contribute not only to development of novel paramagnetic functional species but also to progress on muon science.     

SCF-CI studies of correlation effects on hydrogen bonding and ion hydration

Previous single-determinant Hartree-Fock studies on the equilibrium structures and stabilities of H₂ O, H₃ O⁺ as well as of the monohydrated ionic systems Li⁺ · H₂O, F^? · H₂O and the hydrogen bonded water dimer, H₂ O · HOH, are extended by large scale configuration interaction calculations including all the possible single and double excitations arising from the canonical set of Hartree-Fock molecular orbitals. The correlation energy effects on the equilibrium geometrical parameters of the systems under consideration are found to be quite small. The contributions of the correlation energy to the total binding energies of the weakly interacting composed systems are obtained to be of the order of 1 kcal/mole, leading to a considerable increase of the hydrogen bond strength in F^? · H₂O and H₂O · HOH and to a small decrease of the binding energy in Li⁺ · H₂ O. The observed strengthening of the hydrogen bonding interaction due to correlation is shown to be partly compensated by the change in the vibrational zero-point energy of the composed systems compared to the non-interacting subsystems. Approximate force constants corresponding to the intersystem vibrations in Li⁺ · H₂O, F^? · H₂ O, and H₂O · HOH are deduced from the calculated potential curve data on the SCF and the CI level of accuracy.     

Isomorphous crystals of strychninium 4‐chloro­benzoate and strychninium 4‐nitro­benzoate

In strychninium 4‐chloro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄ClO₂⁻, (I), and strychninium 4‐nitro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄NO₄⁻, (II), the strychninium cations form pillars stabilized by C—H⋯O and C—H⋯π hydrogen bonds. Channels between the pillars are occupied by anions linked to one another by C—H⋯π hydrogen bonds. The cations and anions are linked by ionic N—H⁺⋯O⁻ and C—H⋯X hydrogen bonds, where X = O, π and Cl in (I), and O and π in (II).     

A whole zoo of hydrogen bonds in one crystal structure: tris(isonicotinium) hydrogensulfate sulfate monohydrate

Depending on the reaction partner, the organic ditopic molecule isonicotinic acid (Hina) can act either as a Brønsted acid or base. With sulfuric acid, the pyridine ring is protonated to become a pyridinium cation. Crystallization from ethanol affords the title compound tris(4‐carboxypyridinium) hydrogensulfate sulfate monohydrate, 3C₆H₆NO₂⁺·HSO₄⁻·SO₄²⁻·H₂O or [(H₂ina)₃(HSO₄)(SO₄)(H₂O)]. This solid contains 11 classical hydrogen bonds of very different flavour and nonclassical C—H…O contacts. All N—H and O—H donors find at least one acceptor within a suitable distance range, with one of the three pyridinium H atoms engaged in bifurcated N—H…O hydrogen bonds. The shortest hydrogen‐bonding O…O distance is subtended by hydrogensulfate and sulfate anions, viz. 2.4752 (19) Å, and represents one of the shortest hydrogen bonds ever reported between these residues.     

3,4‐Di‐2‐pyridyl‐1,2,5‐oxadiazole and its perchlorate salt

In 3,4‐di‐2‐pyridyl‐1,2,5‐oxadiazole (dpo), C₁₂H₈N₄O, each mol­ecule resides on a twofold axis and inter­acts with eight neighbours via four C—H⋯N and four C—H⋯O inter­actions to generate a three‐dimensional hydrogen‐bonded architecture. In the perchlorate analogue, 2‐[3‐(2‐pyrid­yl)‐1,2,5‐oxadiazol‐4‐yl]pyridinium perchlorate, C₁₂H₉N₄O⁺·ClO₄⁻ or [Hdpo]ClO₄, the [Hdpo]⁺ cation is bisected by a crystallographic mirror plane, and the additional H atom in the cation is shared by the two pyridyl N atoms to form a symmetrical intra­molecular N⋯H⋯N hydrogen bond. The cations and perchlorate anions are linked through C—H⋯O hydrogen bonds and π–π stacking inter­actions to form one‐dimensional tubes along the b‐axis direction.     

Three‐dimensional networks in bis(imidazolium) 2,2′‐dithiodibenzoate and 4‐methylimidazolium 2‐[(2‐carboxyphenyl)disulfanyl]benzoate

Cocrystallization of imidazole or 4‐methylimidazole with 2,2′‐dithiodibenzoic acid from methanol solution yields the title 2:1 and 1:1 organic salts, 2C₃H₅N₂⁺·C₁₄H₁₀O₄S₂²⁻, (I), and C₄H₇N₂⁺·C₁₄H₁₀O₄S₂⁻, (II), respectively. Compound (I) crystallizes in the monoclinic C2/c space group with the mid‐point of the S—S bond lying on a twofold axis. The component ions in (I) are linked by intermolecular N—H...O hydrogen bonds to form a two‐dimensional network, which is further linked by C—H...O hydrogen bonds into a three‐dimensional network. In contrast, by means of N—H...O, N—H...S and O—H...O hydrogen bonds, the component ions in (II) are linked into a tape and adjacent tapes are further linked by π–π, C—H...O and C—H...π interactions, resulting in a three‐dimensional network.     

Codeine dihydrogen phosphate hemihydrate

The cation of the title structure [systematic name: (5α,6α)‐6‐hydroxy‐7,8‐didehydro‐4,5‐epoxy‐3‐methoxy‐17‐methylmorphinanium dihydrogen phosphate hemihydrate], C₁₈H₂₂NO₃⁺·H₂PO₄⁻·0.5H₂O, has a T‐shaped conformation. The dihydrogen phosphate anions are linked by O—H...O hydrogen bonds to give an extended ribbon chain. The codeine cations are linked together by O—H...O hydrogen bonds into a zigzag chain. There are also N—H...O bonds between the two types of hydrogen‐bonded units. Addditionally, they are connected to one another via O...H—O—H...O bridging water molecules. The asymmetric unit contains two codeine hydrogen cations, two dihydrogen phosphate anions and one water molecule. This study shows that the water molecules are firmly bound within a complex three‐dimensional hydrogen‐bonded framework.     

Symmetric hydrogen bonding in dimethyl­ammonium hydrogen diphenyl­diphospho­nate

In the title compound, C₂H₈N⁺·C₁₂H₁₁O₅P₂⁻, pairs of hydrogen diphenyl­diphospho­nate anions form dimers across a twofold axis, with two symmetric O⋯H⋯O hydrogen bonds [O⋯O = 2.406 (3) and 2.418 (3) Å]. The 12‐membered ring thus formed has crystallographic 2 and quasi‐222 symmetry. Cations on either side of the ring form N—H⋯O hydrogen bonds to the four extraannular O atoms, with N⋯O distances of 2.765 (2) and 2.748 (3) Å.     

2‐(Hydro­xy­methyl)­pyridinium di­hydrogenphosphate

The title compound, C₆H₈NO⁺·H₂PO₄⁻, consists of 2‐(hy­droxy­methyl)­pyridinium and di­hydrogen­phosphate ions. The di­hydrogen­phosphate moieties are linked into chains by pairs of P—O—H⃛O—P hydrogen bonds. The 2‐(hydroxy­methyl)­pyridinium cations are connected to the di­hydrogen­phosphate units by O—H⃛O and N—H⃛O hydrogen bonds. Weak π–π interactions help to determine the interchain packing.     

Bis(5‐tert‐butyl‐2‐hydroxy‐3‐methylbenzyl)(6‐hydroxyhexyl)ammonium chloride monohydrate,an anion receptor complex

In the title compound, C₃₀H₄₈NO₃⁺·Cl⁻·H₂O, the cation acts with a water molecule as a chloride ion receptor. The chloride ion forms three strong intramolecular hydrogen bonds. The water molecule forms both an intramolecular bridge between one phenol H atom and the chloride ion, and an intermolecular link to the aliphatic alcohol O atom. Weak intermolecular C—H...Cl and C—H ...O hydrogen bonds provide additional packing interactions.     

Ammonium N‐(6‐amino‐3,4‐di­hydro‐3‐methyl‐5‐nitro­so‐4‐oxopyrimidin‐2‐yl)­glycinate monohydrate forms hydrogen‐bonded bilayers

In the title compound, NH₄⁺·C₇H₈N₅O₄⁻·H₂O, the independent components are linked into bilayers by an extensive series of two‐centre N—H⃛O hydrogen bonds [H⃛O = 1.85–1.96 Å, N⃛O = 2.776 (2)–2.840 (2) Å and N—H⃛O = 149–172°], and by asymmetric three‐centre N—H⃛(O)₂, O—H⃛(N,O) and O—H⃛(O)₂ hydrogen bonds.     

A two‐dimensional network in the molecular salt 2‐methylimidazolium hydrogen glutarate,and three‐dimensional networks in the salts 2‐methylimidazolium hydrogen succinate and 2‐methylimidazolium hydrogen adipate monohydrate

All three title compounds, C₄H₇N₂⁺·C₄H₅O₄⁻, (I), C₄H₇N₂⁺·C₅H₇O₄⁻, (II), and C₄H₇N₂⁺·C₆H₉O₄⁻·H₂O, (III), can be regarded as 1:1 organic salts. The dicarboxylic acids join through short acid bridges into infinite chains. Compound (I) crystallizes in the noncentrosymmetric Cmc2₁ space group and the asymmetric unit consists of a hydrogen succinate anion located on a mirror plane and a 2‐methylimidazolium cation disordered across the same mirror. The other two compounds crystallize in the triclinic P space group. The carboxylic acid H atom in (II) is disordered over both ends of the anion and sits on inversion centres between adjacent anions, forming symmetric short O...H...O bridges. Two independent anions in (III) sit across inversion centres, again with the carboxylic acid H atom disordered in short O...H...O bridges. The molecules in all three compounds are linked into two‐dimensional networks by combinations of imidazolium–carboxylate N⁺—H...O and carboxylate–carboxylate O—H...O hydrogen bonds. The two‐dimensional networks are further linked into three‐dimensional networks by C—H...O hydrogen bonds in (I) and by O_water—H...O hydrogen bonds in (III). According to the ΔpK_a rule, such 1:1 types of organic salts can be expected unambiguously. However, a 2:1 type of organic salt may be more easily obtained in (II) and (III) than in (I).     

Cocrystallization of melaminium levulinate monohydrate

Crystals of 2,4,6‐tri­amino‐1,3,5‐triazin‐1‐ium levulinate (4‐oxo­pentanoate) monohydrate, C₃H₇N₆⁺·C₅H₇O₃⁻·H₂O, are formed via self‐assembled hydrogen bonding by cocrystallization of mel­amine and levulinic acid. Two N—H⋯N hydrogen bonds and four N—H⋯O hydrogen bonds connect two melaminium entities such that each of two pairs of N—H⋯O bonds bridges two H atoms belonging to the amine groups of two different melaminium cations via the carbonyl O atom of one levulinate mol­ecule.     

Hydrogen‐bonded sheets in benzylmethylammonium hydrogen maleate

In the title compound, C₈H₁₂N⁺·C₄H₃O₄⁻, there is a short and almost linear but asymmetric O—H...O hydrogen bond in the anion. The ions are linked into C₂²(6) chains by two short and nearly linear N—H...O hydrogen bonds and the chains are further weakly linked into sheets by a single C—H...O hydrogen bond.     

2,3‐Dihydro‐1,3‐benzothiazol‐2‐iminium hydrogen oxydiacetate: a combined structural and theoretical study

In the title compound, C₇H₇N₂S⁺·C₄H₅O₅⁻, the ions are connected by N—H...O hydrogen bonds. The hydrogen oxydiacetate residues are linked together by O—H...O hydrogen bonds disordered about centres of inversion into hydrogen‐bonded ribbon layers crosslinked by weak C—H...O and stacking interactions. The cation exists mainly in the 2,3‐dihydro‐1,3‐benzothiazol‐2‐iminium form, with a small participation of the 2‐aminobenzothiazolium form, based on the structural data and quantum mechanical calculations. This study provides structural insights relevant to the biochemical activity of benzothiazole molecules.     

N—H...O and O—H...O hydrogen‐bonded supramolecular networks in 4‐chloroanilinium, 2‐hydroxyanilinium and 3‐hydroxyanilinium hydrogen phthalates

The title salts, 4‐chloroanilinium hydrogen phthalate (PCAHP), C₆H₇ClN⁺·C₈H₅O₄⁻, 2‐hydroxyanilinium hydrogen phthalate (2HAHP), C₆H₈NO⁺·C₈H₅O₄⁻, and 3‐hydroxyanilinium hydrogen phthalate (3HAHP), C₆H₈NO⁺·C₈H₅O₄⁻, all crystallize in the space group P2₁/c. The asymmetric unit of 2HAHP contains two independent ion pairs. The hydrogen phthalate ions of 2HAHP and 3HAHP show a short intramolecular O—H...O hydrogen bond, with O...O distances ranging from 2.3832 (15) to 2.3860 (14) Å. N—H...O and O—H...O hydrogen bonds, together with short C—H...O contacts in PCAHP and 3HAHP, generate extended hydrogen‐bond networks. PCAHP forms a two‐dimensional supramolecular sheet extending in the (100) plane, whereas 2HAHP has a supramolecular chain running parallel to the [100] direction and 3HAHP has a two‐dimensional network extending parallel to the (001) plane.     

Influence of anion substitution on hydrogen‐bonding patterns of salt compounds: cytosinium hydrogen sulfate and cytosinium perchlorate

In the two title compounds, cytosinium hydrogen sulfate, C₄H₆N₃O⁺·HSO₄⁻, (I), and cytosinium perchlorate, C₄H₆N₃O⁺·ClO₄⁻, (II), the asymmetric units comprise a cytosinium cation with hydrogen sulfate and perchlorate anions, respectively. The crystal structures of (I) and (II) are similar; that of (I) is characterized by a three‐dimensional N—H...O, O—H...O and C—H...O hydrogen‐bonded network. In (I) and (II), two‐dimensional layers are formed by N—H...O and C—H...O hydrogen bonds and, in the case of (I), they are linked by O—H...O hydrogen bonds where the anion acts as a donor and the cation as an acceptor. The hydrogen‐bonded sheets in (II) form an angle of 87.1°.     

The ternary complex 4‐(2‐pyridyl)pyridinium–3,5‐di­nitro­benzoate–3,5‐di­nitro­benzoic acid (1/1/1)

In the title ternary complex, C₁₀H₉N₂⁺·C₇H₃N₂O₆^?·C₇H₄N₂O₆, the pyridinium cation adopts the role of the donor in an intermolecular N—H?O hydrogen‐bonding interaction with the carboxyl­ate group of the 3,5‐di­nitro­benzoate anion. The mol­ecules of the ternary complex form molecular ribbons perpendicular to the b direction, which are stabilized by one N—H?O, one O—H?O and five C—H?O intermolecular hydrogen bonds. The ribbons are further interconnected by three intermolecular C—H?O hydrogen bonds into a three‐dimensional network.     

Piperidinium 3‐[(4‐hydroxy‐5,7‐di­methyl‐2‐oxo‐2H‐chromen‐3‐yl)­phenyl­methyl]‐5,7‐di­methyl‐2‐oxo‐2H‐chromen‐4‐olate

In the title salt, C₅H₁₂N⁺·C₂₉H₂₃O₆^?, both benzo­pyran systems are planar. Intermolecular N—H?O hydrogen bonds and a short O—H?O intramolecular hydrogen bond are observed in the structure.