The Cl−NH3, Cl−H2O,F−NH3 and F−H2O clusters and their photoelectron spectra

The geometries of the Cl^–NH₃, Cl^–H₂O, F^–NH₃ and F^–H₂O clusters are optimized using the coupled cluster method. The four lowest ionization potentials are then calculated, leading to the ground and low excited states of the neutral species. The first three IPs describe ionization from the externalp state of the halogen atom, whereas the fourth corresponds to ionization from the NH₃ or H₂O moiety, leading to charge transfer complexes. These complexes were recently observed in the photoelectron spectrum of Cl^–NH₃, in full accord with our calculations.Supported in part by the U.S.-Israel Binational Science Foundation     

Low-voltage thin-layer electrophoresis of inorganic anions on silica gel-G and titanium (IV) tungstate layers: separation of coexisting F−, Cl−, Br− and I−, I−, IO3− and IO4−, Fe(CN)64− and Fe(CN)63−

The electrophoretic behavior of twenty anions has been studied on silica gel-G, titanium (IV) tungstate and silica gel-G- titanium (IV) tungstate admixture layers using 0.1 M solutions of oxalic acid, citric acid, tartaric acid, succinic acid and acetic acid as background electrolyte. The mechanism of migration is explained in terms of adsorption and the solubility of various sodium or potassium salts of the anions in water. Titanium (IV) tungstate behaves only as an adsorbent and not as an ion exchanger. Being a cation exchanger, there is no exchange phenomenon occurring with anions. The migration of halides increase linearly with an increase in the bare ion radii of these ions. Differential migration of the anions on silica gel-G layers led to binary, ternary and quaternary separations of similar anions such as F⁻ – Cl⁻ – Br⁻ – I⁻, I⁻ – IO₃⁻ – IO₄⁻, BrO₃⁻ – IO₃⁻ and Fe(CN)₆³⁻ – Fe(CN)₆⁴⁻. The two cyanoferrate ions are separated from industrial waste water and from fixer and bleach solutions. The migration of anions has also been found to be in accordance with their lyotropic numbers.

     

Complexes H2CO:PXH2 and HCO2H : PXH2 for X=NC,F, Cl,CN, OH,CCH, CH3, and H: Pnicogen Bonds and Hydrogen Bonds

Ab initio MP2/aug’-cc-pVTZ calculations have been carried out to investigate H₂CO : PXH₂ pnicogen-bonded complexes and HCO₂H : PXH₂ complexes that are stabilized by pnicogen bonds and hydrogen bonds, with X=NC, F, Cl, CN, OH, CCH, CH₃, and H. The binding energies of these complexes exhibit a second-order dependence on the O−P distance. DFT-SAPT binding energies correlate linearly with MP2 binding energies. The HCO₂H : PXH₂ complexes are stabilized by both a pnicogen bond and a hydrogen bond, resulting in greater binding energies for the HCO₂H : PXH₂ complexes compared to H₂CO : PXH₂. Neither the O−P distance across the pnicogen bond nor the O−P distance across the hydrogen bond correlates with the binding energies of these complexes. The nonlinearity of the hydrogen bonds suggests that they are relatively weak bonds, except for complexes in which the substituent X is either CH₃ or H. The pnicogen bond is the more important stabilizing interaction in the HCO₂H : PXH₂ complexes except when the substituent X is a more electropositive group. EOM-CCSD spin-spin coupling constants ^1pJ(O−P) across pnicogen bonds in H₂CO:PXH₂ and HCO₂H : PXH₂ complexes increase as the O−P distance decreases, and exhibit a second order dependence on that distance. There is no correlation between ^2hJ(O−P) and the O−P distance across the hydrogen bond in the HCO₂H : PXH₂ complexes. ^2hJ(O−P) coupling constants for complexes with X=CH₃ and H have much greater absolute values than anticipated from their O−P distances.     

A theoretical study of diborenes HLB=BLH for L=CO, NH3, OH2, PH3, SH2, ClH: structures, energies, and spin–spin coupling constants

Ab initio calculations were carried out to investigate the structures, binding energies, bonding, and NMR spin–spin coupling constants of complexes HLB=BLH, for L=CO, NH₃, OH₂, PH₃, SH₂, and ClH. Both B–B and B–H bonds lengthen on complex formation relative to singlet HBBH, and except for L=CO, the B–B bonds are double bonds. The order of stability of the trans isomers correlates with the ordering of ligands in the spectrochemical series of ligand field theory. The trans isomer is always more stable than the corresponding cis. Inverse correlations are found between ¹ J(B–B) and ¹ J(B–H) and the corresponding B–B and B–H distances. For the trans isomers, ¹ J(B–B) appears to be related to the ordering of ligands in the spectrochemical series, while ¹ J(B–H) is related to the protonation energy of the ligand L.     

Do branched structures exist for cyanide‐containing magnesium compounds? Computational studies on a range of mixed‐ligand compounds XMg(CN) (X = F,Cl, OH,SH, NH2, CH3, CN)

Cyanide compounds of the alkali metals and alkaline earths are commonly found to possess “branched” or π‐complex structures in which the metal atom is almost equidistant from both atoms of the CN moiety. Here we present an investigation of the potential energy surfaces for various compounds of the form XMg(CN), using the Gaussian‐2 (G2) procedure. Our results suggest that magnesium, at least, is not so prone to π‐complex formation with the cyanide ligand as has previously been implied, since the presence of the π complex upon the potential energy surface is strongly dependent upon the level of theory employed in geometry optimizations. We find also that, according to G2 theory, the preference of magnesium for isocyanide (rather than cyanide) formation is small but consistent, with XMgNC isomers having calculated heats of formation between 2 and 5 kJ mol⁻¹ below their XMgCN counterparts. The barriers to interconversion of cyanide and isocyanide isomers are also calculated to be comparatively small, typically ∼25 kJ mol⁻¹. In contrast, calculations for protonated species FMg(CN)H⁺ and Mg(CN)₂H⁺ have determined that the π complexes in these species are indeed stable against CN‐ligand reorientation. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 76: 626–642, 2000     

Structures, energies, bonding, and NMR properties of pnicogen complexes H2XP:NXH2 (X ═ H, CH3, NH2, OH, F, Cl)

Ab initio calculations have been carried out in a systematic investigation of P···N pnicogen complexes H(2)XP:NXH(2) for X ═ H, CH(3), NH(2), OH, F, and Cl, as well as selected complexes with different substituents X bonded to P and N. Binding energies for complexes H(2)XP:NXH(2) range from 8 to 27 kJ mol(-1) and increase to 39 kJ mol(-1) for H(2)FP:N(CH(3))H(2). Equilibrium structures have a nearly linear A-P-N arrangement, with A being the atom directly bonded to P. Binding energies correlate with intermolecular N-P distances as well as with bonding parameters obtained from AIM and SAPT analyses. Complexation increases (31)P chemical shieldings in complexes with binding energies greater than 19 kJ mol(-1). One-bond spin-spin coupling constants (1p)J(N-P) across the pnicogen interaction exhibit a quadratic dependence on the N-P distance for complexes H(2)XP:NXH(2), similar to the dependence of (2h)J(X-Y) on the X-Y distance for complexes with X-H···Y hydrogen bonds. However, when the mixed complexes H(2)XP:NX'H(2) are included, the curvature of the trendline changes and the good correlation between (1p)J(N-P) and the N-P distance is lost.     

Theoretical calculations of the substituent effect on molecular properties of the RCN⋯HF hydrogen-bonded complexes with R = NH2, CH3O,CH3, OH,SH, H,Cl, F,CF3, CN and NO2

DFT calculations with B3LYP and PBE1PBE functionals and 6–311++G(d,p) basis set have been performed in order to obtain molecular geometries, binding energies and vibrational properties of the RCN?HF H-bonded complexes with R = NH₂, CH₃O, CH₃, OH, SH, H, Cl, F, CF₃, CN and NO₂. As expected, it has been verified as a red-shift of the HF stretching frequency (ν_HF), in conformity with the elongation of the bond after complexation. On the other hand, the CN stretching frequency (ν_CN) is blue-shifted and corresponds to a shortening of the bond. The binding energies (ΔE_c), including BSSE and ZPVE corrections, show a linear correlation with several structural, electronic and vibrational properties. In particular, an important linear dependence between the binding energy and the calculated dipole moment of the free RCN molecule (μ_RCN) has been found. This result suggests that μ_RCN can be a useful quantity in order to predict the ability of this fragment to form a hydrogen-bond. The IR intensities of stretching and bending modes of complexed HF acid fragment are adequately interpreted through the atomic polar tensor of the hydrogen atom in HF using the modified CCFO model for infrared intensities. The new vibrational modes arising from complexation show several interesting features.     

Comparison of Silica-, C18−, and NH2−HPLC Columns for the Separation of Neutral Steroid Saponins from Dioscorea Plants

Abstract

Six neutral steroid saponins including dioscin and gracillin from the tubers of Dioscorea plants and their peracetates were chromatographed by silica-, C₁₈?, and NH₂?column high-performance liquid chromatography (HPLC). The eluent containing water was used in the silica-column HPLC for the separation of these saponins. These HPLC systems complement each other and allow separation of the saponins. The number of carbohydrate units in the saponin molecule plays the most important role for the separations. The more carbohydrate units in the molecule, the more polar is the saponin or its peracetate. Separation of saponins containing the same number of carbohydrate units can be improved by using their peracetates.     

Raman intensities of liquids: absolute scattering activities and ClO bond EOPs of ClO−, ClO−2, ClO−3 and ClO−4 ions in aqueous solution

Absolute Raman scattering activities of aqueous solutions of the following ions have been measured: ClO⁻, ClO⁻₂, ClO⁻₃, ClO⁻₄. Electro-optical parameters (EOPs) for the ClO bonds in these compounds were calculated. Equilibrium bond polarizabilities and their derivatives with respect to bond length can be correlated with the number of valence electrons in non-bonding and antibonding orbitals. High equilibrium bond polarizability goes with small polarizability derivatives, and vice versa, for the compounds studied here.     

Geometric shielding corrections for calculation of electron scattering by CO2, C2H2, CHCl3, CH2Cl2, CH3Cl,CHF3, CH2F2 and CH3F at 30–5000 eV

Taking into account the changes of the geometric shielding effect in a molecule as the incident electron energy varies, an empirical fraction, which depends on the energy of the incident electrons, the target's molecular dimension and the atomic and electronic numbers in the molecule, is presented. Using this empirical fraction, a new formulation of the additivity rule is proposed. Using the new additivity rule, the total cross sections of electron scattering by CO₂, C₂H₂, CHCl₃, CH₂Cl₂, CH₃Cl, CHF₃, CH₂F₂ and CH₃F are calculated at the Hartree–Fork level at 30–5000 eV. The quantitative total cross sections are compared with those obtained by experiments and other theories, and good agreement is obtained over a wide energy range, especially above 100 eV.     

Theoretical study of aluminide clusters Al13X, Al13X−, and Al13X 2 − (X=H, Hal, OH, NH2, CH3, and C6H5)

The structural, electronic, energy, and vibrational characteristics of the Al₁₃X^? and Al₁₃X ₂ ^? clusters, with an aluminum-centered (Al_c) icosahedral cage Al₁₃ and with one or two outer-sphere ligands X=H, F, Cl, Br, OH, NH₂, CH₃, C₆H₅, have been calculated within the B3LYP approximation of the density functional theory using the 6-31G* and 6-311+G* basis sets. In all Al₁₃X^? radicals, the unpaired electron is localized at the cage atom Al* located opposite the Al-X bond. This Al* atom is the most favorable site for attaching the second X ligand of any nature (trans-addition rule). According to the previously suggested molecular model of the valence state of the [Al ₁₃ ^? ] “superatom,” the calculated energies D ₁(Al ₁₃ ^? -X) of addition of the first ligand to the Al ₁₃ ^? anion are about 1 eV lower than the corresponding energies of addition of the second ligand D ₂(XAl ₁₃ ^? -X). The structure of the Al₁₃ cage depends on the nature of the nature of the substituent X and can radically change in going from anions to their neutral congeners. In the lowest-lying Al₁₃X isomer with electronegative substituents X (Hal, OH, NH₂, CH₃, etc.), the aluminum cage has a marquee structure (1, symmetry C _s) with a hexagonal base and a pentagonal “roof.” For Al₁₃X analogues with electropositive ligands X (Al, Li, Na), a tridentate isomer (T, C _3v ) with the X substituent coordinated to a face of the Al₁₃ icosahedron is preferable. In the case of moderately electronegative X ligands (of the H type), the marquee (1) and icosahedral (T) isomers are close in energy. The stretching vibration frequencies of isomers 1 and T differ significantly in magnitude and intensity so that vibrational spectroscopy methods can be especially applicable to their experimental identification.     

Prediction and characterization of HCCH···AuX (X = OH, F, Cl, Br, CH3, CCH, CN, and NC) complexes: a π Au-bond

In this article, we performed quantum chemical calculations to study the π Au-bond in the HCCH···AuX (X = OH, F, Cl, Br, CH(3), CCH, CN, and NC) system. For comparison, we also investigated the HCCH···Au(+) and H(2)CCH(2)···AuF complexes. The equilibrium geometries and infrared spectra at the MP2 level were reported. The interaction energies were calculated at the MP2 and coupled-cluster single double triple levels. The natural bond orbital results support the Dewar-Chatt-Duncanson model. Moreover, we focused on the influence of X atom on the geometries, interaction energies, and orbital interactions as well as the comparison between HCCH···AuF and H(2)CCH(2)···AuF complexes. Although the π Au-bond in these complexes is electrostatic in nature, the weight of covalent nature is also important.     

A DICD (dispersion-induced circular dichroism) and normal absorption study of the n → π* carbonyl transition for the isoelectronic substituent series −CH3, −NH2, −OH

An experimental DICD (dispersion-induced circular dichroism) and parallel normal absorption study of the lowest n → π* transition of the carbonyl chromophore in simple carbonyls of the form R₁R₂CO for the isoelectronic substituent series R_i = −CH₃, −OH and −NH₂ is presented. The results indicate that, contrary to conventional expectations, the energetic position of the transition is progressively shifted to lower energy for the above substituent ordering. The weakness of the absorption bands in acetic acid and urea provides a rationale for why these bands have not been previously reported. The results suggest that the relative shift is ascribable to resonance (through space) coupling between the substituent and the carbonyl π-system.     

Trans influences of Cl−, NCO− and NCS− donors on planar NiS2PN(CO), NiS2PN(CS), NiS2PCl and NiS2P2 chromophores: synthesis,NMR spectral and single crystal X-ray structural studies

Planar [Ni(bedtc)(PPh₃)Cl] (1), [Ni(bedtc)(PPh₃)(NCO)] (2), [Ni(bedtc)(PPh₃)(NCS)] (3), [Ni(bedtc)(PPh₃)(CN)] (4) and [Ni(bedtc)(dppe)]ClO₄ (5) (where bedtc = N-benzyl-N-(2-hydroxyethyl)dithiocarbamate anion, PPh₃ = triphenylphosphine and dppe = 1,2-bis((diphenylphosphino)ethane)) were prepared from [Ni(bedtc)₂]. Complexes 1–5 were characterized by elemental analysis, electronic, IR and NMR (¹H, ¹³C, and ³¹P) spectra. Electronic spectra of the complexes show bands corresponding to dz ² → dxy/dx ² ? y ² transitions. The complexes were diamagnetic. IR and ¹³C NMR studies indicate the mesomeric flow of π-electron density from the dithiocarbamate towards the nickel. In ¹H NMR, α-CH₂–and β-CH₂–protons of–CH₂–CH₂–OH were equally deshielded. The deshielding for the coordinated phosphorus signals in ³¹P NMR spectra for all the cases compared with the free phosphine clearly manifests the drift of electron density from the phosphorus toward the metal on complexation. Single crystal X-ray structures of 1–3 indicate that nickel is in a planar environment with short >S₂C–N bond distances. In 2, a rare mode of coordination between nickel and cyanate (NCO^?) through the nitrogen is observed. Significant asymmetry in Ni–S bond distances were observed for 1–3 clearly supporting the trans influences of Cl^?, NCO^? and NCS^?, respectively, over PPh₃.     

Concerted Interaction between Pnicogen and Halogen Bonds in XCl?FH2P?NH3 (X=F,OH, CN,NC, and FCC)

We analyze the interplay between pnicogen‐bonding and halogen‐bonding interactions in the XCl? FH₂P? NH₃ (X=F, OH, CN, NC, and FCC) complex at the MP2/aug‐cc‐pVTZ level. Synergetic effects are observed when pnicogen and halogen bonds coexist in the same complex. These effects are studied in terms of geometric and energetic features of the complexes. Natural bond orbital theory and Bader’s theory of “atoms in molecules” are used to characterize the interactions and analyze their enhancement with varying electron density at critical points and orbital interactions. The physical nature of the interactions and the mechanism of the synergetic effects are studied using symmetry‐adapted perturbation theory. By taking advantage of all the aforementioned computational methods, the present study examines how both interactions mutually influence each other.     

Structural,electronic, and optical properties of Cd-halide-based inorganic LiCdX3 (X = F,Cl) perovskites for photovoltaic applications: A density functional theory study

Halide base perovskite LiCdX₃ (X = F, Cl) is tested by CASTEP (Cambridge Serial Total Energy Package) based on density function theory (DFT). The presented discussion is to explore the structural, electronic, and optical properties of LiCdX₃ (X = F, Cl). The calculated values of the lattice parameter are found to be 3.8 Å and 5.27 Å of LiCdF₃ and LiCdCl₃ respectively. The ideal structure of LiCdX₃ (X = F, Cl) is cubic and dynamically stable. Electronic properties show that materials are semiconductors. The results from band structure are further evaluated by the total and partial density of states. The partial and total density of states confirms the degree of localization of electrons. In optical properties, the highest absorption coefficient is observed in LiCdCl₃. The material is half metallic and has a narrow indirect band gap which may be used in photovoltaic applications.     

Stannylenes: structures, electron affinities, ionization energies, and singlet-triplet gaps of SnX2/SnXY and XSnR/SnR2/RSnR′ species (X; Y = H, F, Cl, Br, I, and R; R' = CH3, SiH3, GeH3, SnH3)

Systematic computational studies of stannylene derivatives SnX(2)/SnXY and XSnR/SnR(2)/RSnR' were carried out using density functional theory. The basis sets used for H, F, Cl, Br, C, Si, and Ge atoms are of double-ζ plus polarization quality with additional s- and p-type diffuse functions, denoted DZP++. For the iodine and tin atoms, the Stuttgart-Dresden basis sets, with relativistic small-core effective core potentials (ECP), are used. All geometries are fully optimized with three functionals (BHLYP, BLYP, and B3LYP). Harmonic vibrational wavenumber analyses are performed to evaluate zero-point energy corrections and to determine the nature of the stationary points located. Predicted are four types of neutral-anion separations, plus adiabatic ionization energies (E(IE)) and singlet-triplet energy gaps (ΔE(S-T)). The dependence of all three energetic properties upon choice of substituent is remarkably strong. The EA(ad(ZPVE)) values (eV) obtained with the B3LYP functional range from 0.70 eV [Sn(CH(3))(2)] to 2.36 eV [SnI(2)]. The computed E(IE) values lie between 7.33 eV [Sn(SnH(3))(2)] and 11.15 eV [SnF(2)], while the singlet-triplet splittings range from 0.60 eV [Sn(SnH(3))(2)] to 3.40 eV [SnF(2)]. The geometries and energetics compare satisfactorily with the few available experiments, while most of these species are investigated for the first time. Some unusual structures are encountered for the SnXI(+) (X = F, Cl, and Br) cations. The structural parameters and energetics are discussed and compared with the carbene, silylene, and germylene analogues.     

Theoretical study on the reaction mechanisms between propadienylidene and R–H (R=F, OH, NH2, CH3): an alternative approach to the formation of alkyne

The reaction mechanisms between propadienylidene and R–H (R=F, OH, NH₂, CH₃) have been systematically investigated employing the second-order Moller–Plesset perturbation theory (MP2) method in order to better understand the reactivity of propadienylidene with those R–H compounds. We have investigated the reaction mechanisms and obtained the possible potential energy surface of these reactions, and we found the mechanisms of four reactions are identical to each other. Based on the calculated results, we can see that there are three steps along the reaction pathway of propadienylidene and R–H. The first step is that propadienylidene inserts into R–H bond to form an allene compound. The second- and third-steps are relevant to the H-transfer reaction, and the final product is alkyne.     

cis-[Pt(NH3)2(L)]2+/+ (L = Cl, H2O, NH3) binding to purines and CO: does pi-back-donation play a role?

The ability of cis-[Pt(NH(3))(2)(L)](2+/+), a molecular fragment of the anticancer drug cisplatin, to bind to purines and CO by pi-back-donation from Pt to the ligand was examined computationally. Optimized geometries and computed vibrational frequencies suggest that cis-[Pt(NH(3))(2)(L)](2+/+) (L = Cl, H(2)O, NH(3)) is a poor pi-donor and that pi-back-donation does not play an important role for Pt(II)-ligand interactions in general.