Molecular structure and decomposition mechanism of peracetic acid esters AcOOR (R = Me,Bu<Superscript>t</Superscript>)

The molecular structure and conformational mobility of methyl and tert-butyl esters of peracetic acid AcOOR (R = Me (1), Bu^t (2)) were studied by the ab initio MP4(SDQ)//MP2(FC)/6-31G(d,p) method and density functional B3LYP/6-31G(d,p) approach. The B3LYP calculated equilibrium conformations of the molecules are characterized by the C-O-O-C torsion angles of 93.6° (1) and 117.0° (2). Structural features of the molecules under study and a distortion of tetrahedral bond configuration at the C_α atom were explained using the natural bonding orbital approach. The standard enthalpies of formation of AcOOMe (−328.5 kJ mol⁻¹) and AcOOBu^t (−440.4 kJ mol⁻¹) were determined using the G2 and G2(MP2) computational schemes and the isodesmic reaction approach. The transition state of AcOOMe decomposition into AcOOH and formaldehyde was calculated (E _a = 122.8 kJ mol⁻¹). The thermal effects of homolytic decomposition of the peroxy esters following a concerted mechanism (Me^· + CO₂ + ^·OR) and simple homolysis of the peroxide bond (AcO^· + ^·OR) were found to be 97.5±0.3 and 155.1±0.3 kJ mol⁻¹, respectively. At temperatures below 400 K, the most probable decomposition mechanism of peroxy esters 1 and 2 involves simple homolysis of the O-O bond.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 2021–2027, October, 2004.     

Potential Functions of Internal Rotation around the Csp2-X Bonds and Intermolecular Interactions in the Compounds CH2 = CHXCH3 (X = O,S, Se)

The potential functions of internal rotation around the Csp ²-X bonds in the CH₂ = CHXCH₃ molecules (X = O, S, Se) were determined by MP2/6-31G* and MP2/6-31G** calculations. The stationary points were identified by solution of vibrational problems. The rotation barriers were evaluated taking into account the zero-point vibration energy. The intramolecular interactions were considered in terms of the method of natural bond orbitals. The degrees of hybridization, energies, and populations of the orbitals of the lone electron pairs of the O, S, and Se atoms, the energies of their donor-acceptor interaction with the antibonding * and * orbitals of the double bond, and the natural atomic charges in various conformations were determined.     

Steric and Electronic Structure of C6H5XCF3 Molecules (X = O or S): A Quantum-Chemical Study

The potential functions of internal rotation around the Csp ²-X bond in C₆H₅XCF₃ molecules (X = O or S) were obtained by quantum-chemical calculations in the HF/6-31G(d), MP2(f)/6-31G(d), and B3LYP/6-31G(d) approximations. The calculations were performed in the range of torsion angles (angle between the planes of the benzene ring and Csp ²-X-Csp ³ bonds) from 0° to 90° with a 15° step. The barriers to rotation around the Csp ²-X bonds (kJ mol^{- 1}) were evaluated: for C₆H₅XCF₃, 7.60 (HF), 3.04 (MP2), and 1.04 (B3LYP); for C₆H₅XCF₃, 16.57 (HF), 14.67 (MP2), and 8.73 (B3LYP). The geometries (bond angles and bond lengths), Koopmans ionization potentials, and dipole moments of the molecules were calculated. The hybridization, energy, and population of the lone electron pairs of the heteroatoms, and also the energy of their resonance interaction with antibonding orbitals and the natural atomic charges were evaluated using the NBO approach.     

Nature of coordination bond in silatranes and its formation dynamics according to the ab initio calculations

Quantum-chemical calculations of 1-hydrosilatrane molecule with complete optimization of its geometry and at various fixed Si…N distances (2.0 to 3.7 Å) has been carried out at the MP2/6-31G(d) level. The silatranes coordination bond is formed of different atomic orbitals of Si and N atoms participating in a series of molecular orbitals. With the Si…N distance decreasing, contributions of the atomic orbitals in these molecular orbitals have been changed, number of the molecular orbitals has increased, and total energy of the molecule has decreased. At the coordination centers are getting closer, population of the nitrogen valence s and p _z orbitals have changed due to the corresponding bond angle change; the populations of Si and H orbitals are not significantly changed.     

Reactivity of alkyl versus silyl peroxides. The consequences of 1, 2-silicon bridging on the epoxidation of alkenes with silyl hydroperoxides and bis(trialkylsilyl)peroxides

The bond dissociation energies for a series of silyl peroxides have been calculated at the G2 and CBS-Q levels of theory. A comparison is made with the O-O BDE of the corresponding dialkyl peroxides, and the effect of the O-O bond strength on the activation barrier for oxygen atom transfer is discussed. The O-O bond dissociation enthalpies (DeltaH(298)) for bis (trimethylsilyl) peroxide (1) and trimethylsilyl hydroperoxide (2) are 54.8 and 53.1 kcal/mol, respectively at the G2 (MP2) and CBS-Q levels of theory. The O-O bond dissociation energies computed at G2 and G2(MP2) levels for bis(tert-butyl) peroxide and tert-butyl hydroperoxide are 45.2 and 48.3 kcal/mol, respectively. The barrier height for 1,2-methyl migration from silicon to oxygen in trimethylsilyl hydroperoxide is 47.9 kcal/mol (MP4//MP2/6-31G). The activation energy for the oxidation of trimethylamine to its N-oxide by bis(trimethylsilyl) peroxide is 28.2 kcal/mol (B3LYP/6-311+G(3df,2p)// B3LYP/6-31G(d)). 1,2-Silicon bridging in the transition state for oxygen atom transfer to a nucleophilic amine results in a significant reduction in the barrier height. The barrier for the epoxidation of E-2-butene with bis(dimethyl(trifluoromethyl))silyl peroxide is 25.8 kcal/mol; a reduction of 7.5 kcal/mol relative to epoxidation with 1. The activation energy calculated for the epoxidation of E-2-butene with F(3)SiOOSiF(3) is reduced to only 2.2 kcal/mol reflecting the inductive effect of the electronegative fluorine atoms.     

Free radical abstraction of H atom from peroxides with concerted dissociation of O-O bond

Quantum chemical calculations of the dissociation energy of the C-H bond in the ??-hydroperoxide fragment of Me₂CHOOH were carried out. It was shown that abstraction of H atom is accompanied by dissociation of the O-O bond. Density functional calculations of transition states of the reactions of ^·CH₃, CH₃OO^·, and HO₂ ^· radicals with the C-H bond in the ??-hydroperoxide fragment of Me₂CHOOH were carried out. It was established that H atom abstraction is accompanied by concerted dissociation of the O-O bond. For 45 peroxides R¹R²CHOOH, R¹R²CHOOR³, and R¹R²CHOOC(O)R³ (R¹, R² = H, Me, Et, Ph, H₂C=CH), the enthalpies of H atom abstraction from the C-H bond in the a-hydroperoxide fragment with fragmentation of the peroxides at the O-O bond were calculated. The kinetic parameters for 12 classes of radical abstraction reactions with fragmentation of molecules were calculated from experimental data within the framework of the model of intersecting parabolas. The activation energies and reaction rate constants of H atom abstraction from C-H bonds of a-peroxide fragments involving peroxyl and alkyl radicals were determined for 45 peroxides of different structure.     

An ab initio evaluation of the role of p,π interaction: I. Ethylene derivatives

The RHF/6-311G(d) and MP2/6-311G(d) calculations with full geometry optimization were performed for XCH=CH₂ molecules (X = F, Cl, Br, CH₃, CH₂CH₃, CH₂F, CHO). The p _y electron density distribution in these molecules and the bonding molecular orbitals formed by the p _y orbitals of atoms of the planar fragment of these molecule (atomic orbitals whose symmetry axes are perpendicular to this plane) are not determined by the p,π conjugation between the lone electron pair of the heteroatom in substituent X and π electrons of the C=C bond. Changes in the population of the p _y orbitals of the halogen and carbon atoms in going from X = F to X = Cl and Br are not associated with changes in the extent of this p,π interaction. Taking into account the electon correlation in the MP2 method does not noticeably alter the features of the electron density distribution in these molecules estimated by restricted Hartree-Fock calculations.     

Ab initio pseudopotential study of M2As− and M2Br+ (M = Cu,Ag, Au)

The equilibrium geometries and the vibration frequencies of M₂As⁻ and M₂Br⁺ (M = Cu, Ag, Au) are calculated at the Hartree–Fock (HF) and the second‐order Møller–Plesset (MP2) levels with pseudopotentials. The calculated results indicate that the species have a bent structure (C_2v). The electron correlation corrections on the geometrical structure are investigated at the MP2 level, the bond angles are reduced by 10°–20° for considered species. The electron correlation effects on the geometry of the Au₂As⁻ are studied particularly at MP2, MP3, MP4, CCSD and CCSD(T) levels. Comparing the species containing Ag and Au, the relativistic effects slightly short the bond lengths of the species. The bonding possibility of the Au₂As⁻ is predicted. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 80: 38–43, 2000     

Modeling of the mechanism of one-electron transfer from the perylene molecule to the oxygen molecule <Superscript>3</Superscript>O<Subscript>2</Subscript> in the HF medium

The thermodynamic parameters of the formation of the perylene radical cation in anhydrous hydrogen fluoride containing dissolved dioxygen were calculated by the ab initio method MP2. The protonated product of HF autoprotolysis was modeled as the H(FH)₃⁺ cluster. The ³O₂ molecule was found to bind to the linear H(FH)₃⁺ cluster via a hydrogen bond. As the charge and multiplicity of the system change upon the capture of an electron, the oxygen-hydrogen fluoride cluster complex undergoes rearrangement to yield the hydroperoxyl radical OOH incorporated in a cycle formed by HF molecules. The free energy of electron transfer from the perylene molecule to the ³O₂ molecule in the HF medium is about −38 kcal/mol.     

Kinetics and mechanism of oxidation of excited state Tris-(2,2′-bipyridyl)-ruthenium (II) complex by peroxomonosulfate,peroxodisulfate, and peroxodiphosphate

Excitation of Ru(bipy)₃²⁺ ion by visible radiation of wavelength λ = 436 nm in aqueous medium in presence of inorganic peroxides, peroxomonosulfate (PMS), peroxodisulfate (PDS), and peroxodiphosphate (PDP) was found to generate Ru(bipy)₃³⁺. The kinetics of this photochemical oxidation of Ru(bipy)₃²⁺ by each peroxide was followed spectrophotometrically and found to obey a total second-order, first-order each in [Ru(bipy)₃²⁺] and [peroxide]. In the absence of light, thermal reaction of PMS and PDS with Ru(bipy)₃²⁺ occurred but only when at 1.0 M [H⁺] and > 10^?2M [peroxide]. The reaction of PMS with the complex is found to be cyclic, ie., Ru(bipy)₃³⁺ formed oxidizes PMS itself and such a reaction was not observed in the case of PDS and PDP. The effects of pH, [peroxide], and [Ru(bipy)₃²⁺] on the visible light induced oxidation of Ru(bipy)₃²⁺ by these peroxides are investigated. The results are discussed with suitable reaction mechanisms.     

An ab initio study of the p,π interaction: IV. Interaction of an ether oxygen atom with a carbonyl group

RHF/6-311G(d) calculations were performed for the H₃COCOH molecule with full geometry optimization and at varied angles of rotation of the methoxy group about the C-O bond, with all the other geometric parameters optimized. The molecule can exist in two stable conformations with the dihedral angle O¹C¹O²C² of 0.00° and 179.99°. The influence of the rotation angle on the population of the p _y orbital of the carbonyl oxygen atom in compounds with different types of the adjacent bond is essentially similar. The results obtained are inconsistent with the concept of the p,π conjugation involving the p _y orbitals of the planar molecular fragment (orbitals whose symmetry axes are perpendicular to this fragment).     

A theoretical study on the mechanism and thermodynamics of ozone-water gas phase reaction

Ozone water reaction including a complex was studied at the MP2/6-311++G(d,p) and CCSD/6-311++G(2df,2p)//MP2/6-311++G(d,p) levels of theory. The interaction between water oxygen and central oxygen of ozone produces stable H₂O-O₃ complex with no barrier. With decomposition of this complex through H-abstraction by O₃ and O-abstraction by H₂O, three possible product channels were found. Intrinsic reaction coordinate, topological analyses of atom in molecule, and vibrational frequency calculation have been used to confirm the preferred mechanism. Thermodynamic data at T = 298.15 K and atmospheric pressure have been calculated. The results show that the production of hydrogen peroxide is the main reaction channel with ΔG = ?21.112 kJ mol^-1.     

A Computational Approach to the Effects of Solvent on the Structural,Electronic, Spectroscopic (195Pt NMR and IR), and Thermochemical Properties of a Third‐Generation Anticancer Drug: Trans‐Platinum(II) Complex of 3‐Aminoflavone

This study evaluated the structural, electronic and thermochemical properties of an anticancer active molecule, i.e. trans‐bis‐(3‐aminoflavone)dichloridoplatinum(II) (trans‐Pt(3‐af)₂Cl₂; TCAP) in the gas and solution phases. The polarizable continuum model (PCM) model was used to perform the required calculations in five solvents with different polarities. Moreover, the dependencies of energetic aspects, structural, thermodynamic parameters and frontier orbital energies of the complex were also examined. Dependencies of the frequency shifts of u(CO), u(NH) and ¹⁹⁵Pt Chemical shifts on the solvent dielectric were investigated by Kirkwood–Bauer–Magat equation (KBM). The energies of platinum d‐orbitals and formal electron configurations of Pt atom were calculated by natural bond analysis (NBO).     

Molecular structure,conformational mobility,vibrational spectra,and thermochemistry of peroxyacetic acid: an ab initio and density functional study

The structure of the peroxyacetic acid (PAA) molecule and its conformational mobility under rotation about the peroxide bond was studied by ab initio and density functional methods. The free rotation is hindered by the trans-barrier of height 22.3 kJ mol^–1. The equilibrium molecular structure of AcOOH (C _s symmetry) is a result of intramolecular hydrogen bond. The high energy of hydrogen bonding (46 kJ mol^–1 according to natural bonding orbital analysis) hampers formation of intermolecular associates of AcOOH in the gas and liquid phases. The standard enthalpies of formation for AcOOH (–353.2 kJ mol^–1) and products of radical decomposition of the peroxide — AcO^· (–190.2 kJ mol^–1) and AcOO^· (–153.4 kJ mol^–1) — were determined by the G2 and G2(MP2) composite methods. The O—H and O—O bonds in the PAA molecule (bond energies are 417.8 and 202.3 kJ mol^–1, respectively) are much stronger than in alkyl hydroperoxide molecules. This provides an explanation for substantial contribution of non-radical channels of the decomposition of peroxyacetic acid. The electron density distribution and gas-phase acidity of PAA were determined. The transition states of the ethylene and cyclohexene epoxidation reactions were located (E _a = 71.7 and 50.9 kJ mol^–1 respectively).     

The microwave spectrum and structure of 1,1,1,3,3,3-hexafluoropropane,freon R236fa

The microwave spectra of three isotopic species of 1,1,1,3,3,3-hexafluoropropane (R236fa) (CF₃CH₂CF₃, ¹³CF₃CH₂CF₃ and CF₃¹³CH₂CF₃) were observed in the region from 4.5 to 18 GHz using a molecular beam Fourier transform microwave spectrometer (MB-FTMW). The rotational and centrifugal distortion constants were determined. The r_s (C–C) bond length and bond angle (C–C–C) of the molecule were determined to be 1.56(5) and 109(3) Å, respectively. The ab initio calculation of R236fa was executed at the MP2/6-31G(d,p) level. Comparison of the bond length and bond angle of R236fa with those in the other fluoropropanes revealed trends for the C–C bond length and CCC angle, depending on the number of fluorine atoms attached to the central carbon. A similar idea had been noted by Mack et al. from the electron diffraction studies of fluoropropanes.     

Trifluoroacetylsulfenyl trifluoroacetate,CF(3)C(O)-S-O-C(O)CF(3), a novel compound with a symmetrically substituted S-O bond: synthesis,spectroscopic characterization,and quantum chemical calculations

The new compound trifluoroacetylsulfenyl trifluoroacetate, CF(3)C(O)SOC(O)CF(3), which possesses two identical carbonyl substituents attached to the S-O bond, has been synthesized. The IR and UV spectra of the gas phase as well as the (13)C NMR spectrum of the solution in CDCl(3) were recorded and assigned. Quantum chemical calculations were performed with the ab initio methods HF and MP2 and the density functional approach B3LYP. The 6-31G basis set was chosen in all calculations. The molecule possesses a skew structure, and according to all computational methods, the syn-syn structure (C=O bonds of both C(O)CF(3) groups synperiplanar to S-O bond) represents the most stable conformer. In agreement with the quantum chemical calculations, the presence of small amounts (< or =5%) of a second conformer (anti-syn) cannot be excluded on the basis of the IR spectrum. The calculated values for the torsional angle around the S-O bond (delta(C-S-O-C)) of the syn-syn form are smaller than 80 degrees (72-78 degrees). Comparison with theoretical results for the corresponding disulfide CF(3)C(O)SSC(O)CF(3) and peroxide CF(3)C(O)OOC(O)CF(3) indicates that the structural properties of sulfenyl compounds are more similar to those of disulfides than to those of peroxides.     

Molecular orbital study of cobalt-oxygen interaction

A modified CNDO-UHF procedure is used to discuss cobalt-oxygen interactions in CoO and [CoO₂]^q (q = −1, 0, +1, +2, +3). The cobalt orbitals that contribute most to the bonding in these systems are the 4s and 3d orbitals with relatively little contribution from the 4p orbitals. The ground state of CoO is calculated to be a²π with a π hole localized in the 3d orbitals. The dioxygen activation in the CoO₂^q systems is described in terms of the local electron configuration of the O₂(π) antibonding orbitals together with the charge, Mulliken bond order and bond length of coordinated O₂. The distortion properties are described in terms of the thermodynamic stability difference and the energy barrier for the peroxo to superoxo transformation. The CoO₂ systems studied were classified into two groups depending on the degree of dioxygen activation and distortion properties. The lowest activation energy calculated to break the O-O bond corresponded to 69 kcal mol⁻¹, suggesting that dissociative chemisorption of O¹ on a single Co atom is not a likely process.     

Synthesis and crystal structure of triphenyltin and lead complexes with organic peroxides

Crystalline triphenyltin cumyl and tert-butyl peroxides (Ph₃SnOOCMe₂Ph and Ph₃SnOOBu^t, respectively) and triphenyllead cumyl peroxide (Ph₃PbOOCMe₂Ph) were synthesized and characterized by single crystal and powder X-ray diffraction, NMR, FTIR and Raman spectroscopies, TG and DSC analysis. The formation of triphenyltin tert-butyl peroxide in benzene in the presence of a base was proved by ¹¹⁹Sn, ¹³C and ¹H NMR spectroscopy. To the best of our knowledge, the obtained complexes are the first structurally characterized coordination compounds of tin and lead with organic peroxides.     

Theoretical study of molecular interactions of phosphorus ylide with HF, HCN, and HN3

The molecular interactions between phosphorous ylide (PY) and HX molecules (X?=?F, CN, and N₃) were investigated using the MP2 method at 6-311++G(2d,2p) basis set. Three different patterns including non-classical hydrogen bond H···C, X···P interaction and classical hydrogen bond H···X were found for complex formation between PY and HX molecules. From the predicted models, stability of the H···C type complexes are greater than other types. Quantum theories of atoms in molecules and natural bond orbitals methods have been applied to analyze the intermolecular interactions. Good correlations have been found between the interaction energies (SE), the second-order perturbation energy E ⁽²⁾, and the charge transfer qCT in the studied systems.